Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS14600

Experiment: Anaerobic, acetate donor; nitrate and iron electron acceptors

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron electron acceptors
3,236,394	-		LRK54_RS14590	0.39	-0.7
3,236,522	+		LRK54_RS14590	0.62	-0.7
3,236,522	+		LRK54_RS14590	0.62	+0.3
3,236,522	+		LRK54_RS14590	0.62	-0.4
3,236,522	+		LRK54_RS14590	0.62	-0.7
3,236,522	+		LRK54_RS14590	0.62	+0.9
3,236,523	-		LRK54_RS14590	0.63	-1.1
3,236,523	-		LRK54_RS14590	0.63	-0.9
3,236,523	-		LRK54_RS14590	0.63	-2.4
3,236,523	-		LRK54_RS14590	0.63	+1.9
3,236,528	+		LRK54_RS14590	0.63	-0.4
3,236,528	+		LRK54_RS14590	0.63	-0.9
3,236,528	+		LRK54_RS14590	0.63	+0.9
3,236,528	+		LRK54_RS14590	0.63	-0.7
3,236,528	+		LRK54_RS14590	0.63	-1.1
3,236,528	+		LRK54_RS14590	0.63	-1.6
3,236,528	+		LRK54_RS14590	0.63	-0.9
3,236,529	-		LRK54_RS14590	0.64	+0.9
3,236,529	-		LRK54_RS14590	0.64	+0.3
3,236,529	-		LRK54_RS14590	0.64	-0.9
3,236,529	-		LRK54_RS14590	0.64	+0.3
3,236,529	-		LRK54_RS14590	0.64	+0.9
3,236,529	-		LRK54_RS14590	0.64	+0.3
3,236,529	-		LRK54_RS14590	0.64	-1.1
3,236,529	-		LRK54_RS14590	0.64	-0.9
3,236,552	+		LRK54_RS14590	0.68	-0.1
3,236,552	+		LRK54_RS14590	0.68	+0.9
3,236,552	+		LRK54_RS14590	0.68	-1.1
3,236,552	+		LRK54_RS14590	0.68	-0.1
3,236,552	+		LRK54_RS14590	0.68	+0.9
3,236,552	+		LRK54_RS14590	0.68	-0.9
3,236,552	+		LRK54_RS14590	0.68	+0.9
3,236,553	-		LRK54_RS14590	0.68	-1.3
3,236,553	-		LRK54_RS14590	0.68	+0.3
3,236,553	-		LRK54_RS14590	0.68	-0.7
3,236,553	-		LRK54_RS14590	0.68	-0.4
3,236,553	-		LRK54_RS14590	0.68	-1.3
3,236,553	-		LRK54_RS14590	0.68	-1.1
3,236,553	-		LRK54_RS14590	0.68	+0.3
3,236,553	-		LRK54_RS14590	0.68	-1.8
3,236,553	-		LRK54_RS14590	0.68	-1.1
3,236,553	-		LRK54_RS14590	0.68	-1.1
3,236,553	-		LRK54_RS14590	0.68	-1.1
3,236,553	-		LRK54_RS14590	0.68	-2.4
3,236,553	-		LRK54_RS14590	0.68	-0.9
3,236,555	+		LRK54_RS14590	0.68	-1.3
3,236,555	+		LRK54_RS14590	0.68	-0.1
3,236,555	+		LRK54_RS14590	0.68	-0.4
3,236,555	+		LRK54_RS14590	0.68	-0.7
3,236,555	+		LRK54_RS14590	0.68	-0.4
3,236,555	+		LRK54_RS14590	0.68	-0.7
3,236,556	-		LRK54_RS14590	0.68	+0.9
3,236,556	-		LRK54_RS14590	0.68	+0.9
3,236,556	-		LRK54_RS14590	0.68	+0.3
3,236,556	-		LRK54_RS14590	0.68	+1.9
3,236,556	-		LRK54_RS14590	0.68	-0.1
3,236,556	-		LRK54_RS14590	0.68	+0.3
3,236,556	-		LRK54_RS14590	0.68	+1.9
3,236,556	-		LRK54_RS14590	0.68	-0.9
3,236,556	-		LRK54_RS14590	0.68	+0.3
3,236,603	+		LRK54_RS14590	0.77	-0.4
3,236,696	+				+0.9
3,236,696	+				-0.4
3,236,696	+				+0.3
3,236,696	+				+0.9
3,236,696	+				+1.9
3,236,696	+				+0.9
3,236,696	+				-0.7
3,236,696	+				+1.9
3,236,696	+				-0.1
3,236,696	+				+0.9
3,236,696	+				+0.9
3,236,697	-				+0.3
3,236,697	-				-2.4
3,236,697	-				-1.4
3,236,697	-				+1.9
3,236,697	-				-1.3
3,236,697	-				+3.5
3,236,697	-				-0.1
3,236,697	-				+1.9
3,236,697	-				-0.4
3,236,697	-				+1.9
3,236,697	-				-0.4
3,236,697	-				+0.9
3,236,697	-				-0.4
3,236,778	+				-0.9
3,236,778	+				-0.1
3,236,778	+				+1.9
3,236,778	+				-0.4
3,236,778	+				+0.6
3,236,779	-				-0.1
3,236,919	+		LRK54_RS14595	0.19	-0.1
3,236,919	+		LRK54_RS14595	0.19	+0.3
3,236,919	+		LRK54_RS14595	0.19	+0.6
3,236,919	+		LRK54_RS14595	0.19	-1.1
3,236,919	+		LRK54_RS14595	0.19	-0.1
3,236,919	+		LRK54_RS14595	0.19	+1.7
3,236,920	-		LRK54_RS14595	0.19	-1.4
3,236,920	-		LRK54_RS14595	0.19	-1.0
3,236,920	-		LRK54_RS14595	0.19	-0.7
3,236,920	-		LRK54_RS14595	0.19	+1.9
3,237,133	+		LRK54_RS14595	0.59	+1.6
3,237,134	-		LRK54_RS14595	0.59	+1.9
3,237,134	-		LRK54_RS14595	0.59	+0.0
3,237,354	+				+0.5
3,237,354	+				+1.3
3,237,354	+				+0.7
3,237,354	+				+0.3
3,237,355	-				+0.8
3,237,355	-				-0.1
3,237,355	-				+0.0
3,237,355	-				-0.4
3,237,362	+				-0.9
3,237,384	+				+0.9
3,237,384	+				+1.9
3,237,384	+				+0.1
3,237,384	+				+0.3
3,237,384	+				-2.2
3,237,384	+				-1.3
3,237,385	-				+0.3
3,237,385	-				-0.1
3,237,385	-				-0.9
3,237,385	-				+1.8
3,237,385	-				+0.4
3,237,385	-				-0.5
3,237,385	-				-0.1
3,237,477	+				-2.5
3,237,477	+				+0.3
3,237,477	+				-0.7
3,237,477	+				+1.9
3,237,477	+				+0.1
3,237,477	+				+0.9
3,237,477	+				-0.9
3,237,477	+				-0.9
3,237,478	-				+0.9
3,237,478	-				-0.0
3,237,478	-				+0.3
3,237,478	-				+0.2
3,237,478	-				+0.4
3,237,478	-				-1.6
3,237,561	+				-0.8
3,237,561	+				-0.3
3,237,561	+				-0.8
3,237,561	+				+0.1
3,237,561	+				+0.5
3,237,561	+				-0.7
3,237,562	-				-0.9
3,237,562	-				-0.6
3,237,562	-				-2.0
3,237,562	-				-0.9
3,237,562	-				+1.4
3,237,562	-				+0.3
3,237,562	-				+1.9
3,237,913	+		LRK54_RS14600	0.26	-1.3
3,237,913	+		LRK54_RS14600	0.26	+2.3
3,237,913	+		LRK54_RS14600	0.26	-0.1
3,237,913	+		LRK54_RS14600	0.26	-1.4
3,237,913	+		LRK54_RS14600	0.26	-1.7
3,237,913	+		LRK54_RS14600	0.26	-1.1
3,237,913	+		LRK54_RS14600	0.26	-1.9
3,237,913	+		LRK54_RS14600	0.26	+2.1
3,237,913	+		LRK54_RS14600	0.26	-1.4
3,237,913	+		LRK54_RS14600	0.26	+1.1
3,237,913	+		LRK54_RS14600	0.26	-0.1
3,237,913	+		LRK54_RS14600	0.26	-1.6
3,237,913	+		LRK54_RS14600	0.26	+1.0
3,237,913	+		LRK54_RS14600	0.26	+0.9
3,237,913	+		LRK54_RS14600	0.26	-0.7
3,237,913	+		LRK54_RS14600	0.26	+0.3
3,237,913	+		LRK54_RS14600	0.26	-1.3
3,237,913	+		LRK54_RS14600	0.26	-1.0
3,237,913	+		LRK54_RS14600	0.26	+0.4
3,237,913	+		LRK54_RS14600	0.26	-0.9
3,237,914	-		LRK54_RS14600	0.26	+1.1
3,237,914	-		LRK54_RS14600	0.26	-0.8
3,237,914	-		LRK54_RS14600	0.26	-0.1
3,237,914	-		LRK54_RS14600	0.26	+0.6
3,237,914	-		LRK54_RS14600	0.26	+0.9
3,237,914	-		LRK54_RS14600	0.26	+1.6
3,237,914	-		LRK54_RS14600	0.26	-0.3
3,237,914	-		LRK54_RS14600	0.26	+0.9
3,237,914	-		LRK54_RS14600	0.26	-1.6
3,237,914	-		LRK54_RS14600	0.26	+1.2
3,237,915	+		LRK54_RS14600	0.26	-0.9
3,237,915	+		LRK54_RS14600	0.26	-2.4
3,237,915	+		LRK54_RS14600	0.26	+0.8
3,237,915	+		LRK54_RS14600	0.26	+0.9
3,237,915	+		LRK54_RS14600	0.26	+0.9
3,237,915	+		LRK54_RS14600	0.26	-0.0
3,237,915	+		LRK54_RS14600	0.26	+1.7
3,237,915	+		LRK54_RS14600	0.26	+0.9
3,237,915	+		LRK54_RS14600	0.26	-2.7
3,237,915	+		LRK54_RS14600	0.26	-0.4
3,237,915	+		LRK54_RS14600	0.26	-1.4
3,237,916	-		LRK54_RS14600	0.26	+0.6
3,237,916	-		LRK54_RS14600	0.26	+2.9
3,237,916	-		LRK54_RS14600	0.26	+1.1
3,237,916	-		LRK54_RS14600	0.26	+0.5
3,237,916	-		LRK54_RS14600	0.26	-3.2
3,237,916	-		LRK54_RS14600	0.26	+1.3
3,237,916	-		LRK54_RS14600	0.26	-0.4
3,237,916	-		LRK54_RS14600	0.26	+1.1
3,237,916	-		LRK54_RS14600	0.26	+1.6
3,237,916	-		LRK54_RS14600	0.26	-1.1
3,237,916	-		LRK54_RS14600	0.26	-0.7
3,237,916	-		LRK54_RS14600	0.26	-0.2
3,237,916	-		LRK54_RS14600	0.26	+0.4
3,237,916	-		LRK54_RS14600	0.26	-0.2
3,237,916	-		LRK54_RS14600	0.26	-0.4
3,237,916	-		LRK54_RS14600	0.26	+2.9
3,238,020	+		LRK54_RS14600	0.31	+1.0
3,238,020	+		LRK54_RS14600	0.31	-0.5
3,238,020	+		LRK54_RS14600	0.31	+0.2
3,238,021	-		LRK54_RS14600	0.31	+0.3
3,238,021	-		LRK54_RS14600	0.31	-0.1
3,238,329	+		LRK54_RS14600	0.45	+0.2
3,238,330	-		LRK54_RS14600	0.45	+0.8
3,238,440	+		LRK54_RS14600	0.50	-0.4
3,238,440	+		LRK54_RS14600	0.50	+0.7
3,238,440	+		LRK54_RS14600	0.50	-0.1
3,238,441	-		LRK54_RS14600	0.50	-0.4
3,238,449	+		LRK54_RS14600	0.50	-0.1
3,238,449	+		LRK54_RS14600	0.50	+1.9
3,238,449	+		LRK54_RS14600	0.50	+0.1
3,238,449	+		LRK54_RS14600	0.50	-0.2
3,238,449	+		LRK54_RS14600	0.50	+0.3
3,238,449	+		LRK54_RS14600	0.50	-1.3
3,238,449	+		LRK54_RS14600	0.50	+1.0
3,238,450	-		LRK54_RS14600	0.51	+0.5
3,238,450	-		LRK54_RS14600	0.51	-2.0
3,238,450	-		LRK54_RS14600	0.51	-0.1
3,238,450	-		LRK54_RS14600	0.51	+0.3
3,238,450	-		LRK54_RS14600	0.51	+0.9
3,238,450	-		LRK54_RS14600	0.51	+1.0
3,238,450	-		LRK54_RS14600	0.51	-0.6
3,238,450	-		LRK54_RS14600	0.51	+0.1
3,238,450	-		LRK54_RS14600	0.51	-1.5
3,238,507	+		LRK54_RS14600	0.53	-0.7
3,238,507	+		LRK54_RS14600	0.53	+0.3
3,238,507	+		LRK54_RS14600	0.53	-2.3
3,238,507	+		LRK54_RS14600	0.53	+0.6
3,238,507	+		LRK54_RS14600	0.53	-0.9
3,238,507	+		LRK54_RS14600	0.53	+1.0
3,238,507	+		LRK54_RS14600	0.53	-0.1
3,238,507	+		LRK54_RS14600	0.53	-0.4
3,238,507	+		LRK54_RS14600	0.53	-0.8
3,238,508	-		LRK54_RS14600	0.53	-0.8
3,238,508	-		LRK54_RS14600	0.53	-2.1
3,238,508	-		LRK54_RS14600	0.53	+0.6
3,238,508	-		LRK54_RS14600	0.53	-0.4
3,238,508	-		LRK54_RS14600	0.53	+1.9
3,238,508	-		LRK54_RS14600	0.53	-0.6
3,238,508	-		LRK54_RS14600	0.53	+0.9
3,238,508	-		LRK54_RS14600	0.53	+0.9
3,238,608	-		LRK54_RS14600	0.58	+1.7
3,238,627	-		LRK54_RS14600	0.59	+0.3
3,238,627	-		LRK54_RS14600	0.59	-0.7
3,238,627	-		LRK54_RS14600	0.59	+1.3
3,238,647	+		LRK54_RS14600	0.60	+1.9
3,238,648	-		LRK54_RS14600	0.60	-1.4
3,238,648	-		LRK54_RS14600	0.60	+1.9
3,238,648	-		LRK54_RS14600	0.60	-1.3
3,238,648	-		LRK54_RS14600	0.60	-1.7
3,238,668	+		LRK54_RS14600	0.60	-0.9
3,238,668	+		LRK54_RS14600	0.60	-0.6
3,238,668	+		LRK54_RS14600	0.60	+0.3
3,238,668	+		LRK54_RS14600	0.60	+2.1
3,238,668	+		LRK54_RS14600	0.60	-1.0
3,238,668	+		LRK54_RS14600	0.60	+0.9
3,238,668	+		LRK54_RS14600	0.60	-1.8
3,238,668	+		LRK54_RS14600	0.60	+0.3
3,238,669	-		LRK54_RS14600	0.61	-1.6
3,238,669	-		LRK54_RS14600	0.61	+1.9
3,238,669	-		LRK54_RS14600	0.61	-1.4
3,238,710	+		LRK54_RS14600	0.62	-1.4
3,238,710	+		LRK54_RS14600	0.62	+0.3
3,238,710	+		LRK54_RS14600	0.62	-2.6
3,238,711	-		LRK54_RS14600	0.62	+1.2
3,238,711	-		LRK54_RS14600	0.62	+0.8
3,238,711	-		LRK54_RS14600	0.62	-0.3
3,238,711	-		LRK54_RS14600	0.62	-0.9
3,238,851	+		LRK54_RS14600	0.69	+1.5
3,238,851	+		LRK54_RS14600	0.69	-0.4
3,238,851	+		LRK54_RS14600	0.69	-2.2
3,238,851	+		LRK54_RS14600	0.69	-0.3
3,238,851	+		LRK54_RS14600	0.69	-1.7
3,238,851	+		LRK54_RS14600	0.69	+1.3
3,238,851	+		LRK54_RS14600	0.69	+0.6
3,238,851	+		LRK54_RS14600	0.69	-0.1
3,238,851	+		LRK54_RS14600	0.69	+0.9
3,238,852	-		LRK54_RS14600	0.69	-0.4
3,238,852	-		LRK54_RS14600	0.69	-0.3
3,238,852	-		LRK54_RS14600	0.69	-0.7
3,238,852	-		LRK54_RS14600	0.69	-0.4
3,238,852	-		LRK54_RS14600	0.69	+0.9
3,238,852	-		LRK54_RS14600	0.69	-0.0
3,238,852	-		LRK54_RS14600	0.69	-1.4
3,238,852	-		LRK54_RS14600	0.69	-2.0
3,238,922	+		LRK54_RS14600	0.72	+1.9
3,238,923	-		LRK54_RS14600	0.72	+0.1
3,238,923	-		LRK54_RS14600	0.72	-0.4
3,238,929	+		LRK54_RS14600	0.72	-0.4
3,238,929	+		LRK54_RS14600	0.72	-0.4
3,238,930	-		LRK54_RS14600	0.72	+0.9
3,238,930	-		LRK54_RS14600	0.72	+0.3
3,238,930	-		LRK54_RS14600	0.72	-1.4
3,238,930	-		LRK54_RS14600	0.72	+0.1
3,239,020	+		LRK54_RS14600	0.77	-0.1
3,239,022	+		LRK54_RS14600	0.77	-0.9
3,239,022	+		LRK54_RS14600	0.77	-0.9
3,239,022	+		LRK54_RS14600	0.77	+0.3
3,239,022	+		LRK54_RS14600	0.77	-0.7
3,239,022	+		LRK54_RS14600	0.77	+0.5
3,239,022	+		LRK54_RS14600	0.77	+0.1
3,239,022	+		LRK54_RS14600	0.77	-0.3
3,239,023	-		LRK54_RS14600	0.77	+0.5
3,239,023	-		LRK54_RS14600	0.77	+1.9
3,239,023	-		LRK54_RS14600	0.77	-0.4
3,239,023	-		LRK54_RS14600	0.77	+2.3
3,239,023	-		LRK54_RS14600	0.77	+1.0
3,239,023	-		LRK54_RS14600	0.77	+2.5
3,239,023	-		LRK54_RS14600	0.77	+1.3
3,239,023	-		LRK54_RS14600	0.77	-0.1
3,239,023	-		LRK54_RS14600	0.77	+0.9
3,239,023	-		LRK54_RS14600	0.77	-1.4
3,239,023	-		LRK54_RS14600	0.77	-0.8
3,239,023	-		LRK54_RS14600	0.77	+1.0
3,239,023	-		LRK54_RS14600	0.77	+0.7
3,239,023	-		LRK54_RS14600	0.77	+2.5
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