Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10730

Experiment: Anaerobic, acetate donor; nitrate and iron electron acceptors

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron electron acceptors
2,373,592	+		LRK54_RS10725	0.28	+0.3
2,373,592	+		LRK54_RS10725	0.28	-0.3
2,373,592	+		LRK54_RS10725	0.28	+0.8
2,373,592	+		LRK54_RS10725	0.28	-0.9
2,373,592	+		LRK54_RS10725	0.28	-1.7
2,373,592	+		LRK54_RS10725	0.28	+1.5
2,373,592	+		LRK54_RS10725	0.28	+0.8
2,373,592	+		LRK54_RS10725	0.28	+1.4
2,373,592	+		LRK54_RS10725	0.28	-2.2
2,373,592	+		LRK54_RS10725	0.28	-1.0
2,373,592	+		LRK54_RS10725	0.28	+0.3
2,373,593	-		LRK54_RS10725	0.28	-1.5
2,373,593	-		LRK54_RS10725	0.28	+0.2
2,373,593	-		LRK54_RS10725	0.28	+0.3
2,373,593	-		LRK54_RS10725	0.28	-0.5
2,373,593	-		LRK54_RS10725	0.28	-2.4
2,373,593	-		LRK54_RS10725	0.28	-1.5
2,373,593	-		LRK54_RS10725	0.28	+0.8
2,373,593	-		LRK54_RS10725	0.28	+0.2
2,373,593	-		LRK54_RS10725	0.28	-0.7
2,373,593	-		LRK54_RS10725	0.28	-0.2
2,373,821	+		LRK54_RS10725	0.46	-1.7
2,373,821	+		LRK54_RS10725	0.46	-2.9
2,373,822	-		LRK54_RS10725	0.46	-1.7
2,373,865	+		LRK54_RS10725	0.49	+0.8
2,373,865	+		LRK54_RS10725	0.49	+0.2
2,373,865	+		LRK54_RS10725	0.49	-0.2
2,373,865	+		LRK54_RS10725	0.49	-0.4
2,373,865	+		LRK54_RS10725	0.49	-1.9
2,373,865	+		LRK54_RS10725	0.49	-0.3
2,373,865	+		LRK54_RS10725	0.49	+0.2
2,373,865	+		LRK54_RS10725	0.49	-0.5
2,373,865	+		LRK54_RS10725	0.49	+1.2
2,373,865	+		LRK54_RS10725	0.49	-0.4
2,373,865	+		LRK54_RS10725	0.49	-1.5
2,373,865	+		LRK54_RS10725	0.49	+0.2
2,373,865	+		LRK54_RS10725	0.49	-0.8
2,373,865	+		LRK54_RS10725	0.49	+1.8
2,373,866	-		LRK54_RS10725	0.49	-1.3
2,373,866	-		LRK54_RS10725	0.49	+0.4
2,373,866	-		LRK54_RS10725	0.49	+0.8
2,373,866	-		LRK54_RS10725	0.49	+0.8
2,373,866	-		LRK54_RS10725	0.49	-0.6
2,373,866	-		LRK54_RS10725	0.49	+0.5
2,373,946	-		LRK54_RS10725	0.56	-2.2
2,373,946	-		LRK54_RS10725	0.56	-1.0
2,374,060	+		LRK54_RS10725	0.64	+0.6
2,374,060	+		LRK54_RS10725	0.64	-2.1
2,374,060	+		LRK54_RS10725	0.64	+0.7
2,374,061	-		LRK54_RS10725	0.64	-1.0
2,374,061	-		LRK54_RS10725	0.64	-2.4
2,374,061	-		LRK54_RS10725	0.64	+1.0
2,374,061	-		LRK54_RS10725	0.64	-0.1
2,374,078	+		LRK54_RS10725	0.66	+2.4
2,374,078	+		LRK54_RS10725	0.66	+0.2
2,374,079	-		LRK54_RS10725	0.66	+2.8
2,374,079	-		LRK54_RS10725	0.66	-0.3
2,374,210	-		LRK54_RS10725	0.76	-0.2
2,374,314	+		LRK54_RS10725	0.84	-0.8
2,374,315	-		LRK54_RS10725	0.84	-1.6
2,374,440	+				+0.8
2,374,440	+				-0.8
2,374,440	+				+0.3
2,374,440	+				-0.8
2,374,440	+				-1.5
2,374,440	+				+1.5
2,374,440	+				+0.8
2,374,440	+				+1.8
2,374,440	+				+0.8
2,374,440	+				+0.3
2,374,440	+				+0.2
2,374,440	+				+0.2
2,374,440	+				-1.0
2,374,440	+				+1.8
2,374,441	-				+0.2
2,374,441	-				-3.2
2,374,441	-				+0.5
2,374,441	-				-0.2
2,374,441	-				+0.3
2,374,441	-				+2.2
2,374,441	-				-0.2
2,374,441	-				+0.3
2,374,441	-				-1.8
2,374,441	-				+2.8
2,374,441	-				-0.7
2,374,441	-				-1.3
2,374,441	-				-1.8
2,374,441	-				-0.2
2,374,441	-				-2.5
2,374,495	+				-1.0
2,374,496	-				+0.5
2,374,496	-				-3.1
2,374,496	-				+0.2
2,374,496	-				-2.4
2,374,512	+				-0.7
2,374,512	+				-0.8
2,374,512	+				-0.4
2,374,512	+				-1.4
2,374,512	+				+1.8
2,374,512	+				-1.4
2,374,512	+				-0.4
2,374,512	+				-0.4
2,374,512	+				+0.8
2,374,512	+				+0.8
2,374,512	+				-0.5
2,374,513	-				-0.8
2,374,513	-				-0.9
2,374,513	-				-1.4
2,374,513	-				+0.2
2,374,513	-				-0.9
2,374,513	-				-2.0
2,374,562	+				-2.5
2,374,562	+				-0.5
2,374,563	-				+0.8
2,374,563	-				-1.0
2,374,682	+		LRK54_RS10730	0.13	+0.8
2,374,682	+		LRK54_RS10730	0.13	+0.0
2,374,682	+		LRK54_RS10730	0.13	-0.5
2,374,682	+		LRK54_RS10730	0.13	+0.6
2,374,682	+		LRK54_RS10730	0.13	+0.8
2,374,682	+		LRK54_RS10730	0.13	+0.2
2,374,682	+		LRK54_RS10730	0.13	-0.2
2,374,682	+		LRK54_RS10730	0.13	-0.4
2,374,682	+		LRK54_RS10730	0.13	-0.8
2,374,682	+		LRK54_RS10730	0.13	-0.5
2,374,683	-		LRK54_RS10730	0.13	-0.5
2,374,683	-		LRK54_RS10730	0.13	-1.5
2,374,683	-		LRK54_RS10730	0.13	-1.0
2,374,683	-		LRK54_RS10730	0.13	-0.6
2,374,683	-		LRK54_RS10730	0.13	-0.5
2,374,683	-		LRK54_RS10730	0.13	-3.6
2,374,683	-		LRK54_RS10730	0.13	-1.4
2,374,683	-		LRK54_RS10730	0.13	-0.8
2,374,683	-		LRK54_RS10730	0.13	-0.1
2,374,683	-		LRK54_RS10730	0.13	-1.5
2,374,683	-		LRK54_RS10730	0.13	+0.8
2,374,683	-		LRK54_RS10730	0.13	-1.3
2,374,683	-		LRK54_RS10730	0.13	-2.0
2,374,805	+		LRK54_RS10730	0.26	-0.5
2,374,805	+		LRK54_RS10730	0.26	+2.4
2,374,805	+		LRK54_RS10730	0.26	-1.9
2,374,805	+		LRK54_RS10730	0.26	-0.1
2,374,805	+		LRK54_RS10730	0.26	+0.8
2,374,805	+		LRK54_RS10730	0.26	+0.4
2,374,805	+		LRK54_RS10730	0.26	+0.6
2,374,805	+		LRK54_RS10730	0.26	+1.0
2,374,805	+		LRK54_RS10730	0.26	+0.2
2,374,805	+		LRK54_RS10730	0.26	-0.2
2,374,805	+		LRK54_RS10730	0.26	-1.4
2,374,805	+		LRK54_RS10730	0.26	-0.8
2,374,805	+		LRK54_RS10730	0.26	-0.1
2,374,806	-		LRK54_RS10730	0.26	-0.7
2,374,806	-		LRK54_RS10730	0.26	-2.0
2,374,806	-		LRK54_RS10730	0.26	+0.4
2,374,806	-		LRK54_RS10730	0.26	+1.8
2,374,806	-		LRK54_RS10730	0.26	-3.1
2,374,806	-		LRK54_RS10730	0.26	-0.9
2,374,806	-		LRK54_RS10730	0.26	-0.2
2,374,806	-		LRK54_RS10730	0.26	-0.2
2,374,806	-		LRK54_RS10730	0.26	-0.2
2,374,806	-		LRK54_RS10730	0.26	+0.6
2,374,806	-		LRK54_RS10730	0.26	+0.2
2,374,806	-		LRK54_RS10730	0.26	+1.2
2,374,806	-		LRK54_RS10730	0.26	-0.5
2,374,806	-		LRK54_RS10730	0.26	-0.4
2,374,806	-		LRK54_RS10730	0.26	-0.8
2,374,806	-		LRK54_RS10730	0.26	-1.5
2,374,970	+		LRK54_RS10730	0.44	-1.2
2,374,970	+		LRK54_RS10730	0.44	-0.7
2,374,970	+		LRK54_RS10730	0.44	-2.7
2,374,971	-		LRK54_RS10730	0.44	-0.5
2,374,971	-		LRK54_RS10730	0.44	+1.0
2,374,971	-		LRK54_RS10730	0.44	-0.3
2,374,971	-		LRK54_RS10730	0.44	-0.2
2,374,971	-		LRK54_RS10730	0.44	-0.8
2,375,153	+		LRK54_RS10730	0.63	-1.1
2,375,153	+		LRK54_RS10730	0.63	-0.8
2,375,153	+		LRK54_RS10730	0.63	+1.8
2,375,357	+		LRK54_RS10730	0.84	+0.2
2,375,357	+		LRK54_RS10730	0.84	-0.4
2,375,357	+		LRK54_RS10730	0.84	-1.9
2,375,357	+		LRK54_RS10730	0.84	-3.1
2,375,357	+		LRK54_RS10730	0.84	-1.7
2,375,357	+		LRK54_RS10730	0.84	+0.8
2,375,358	-		LRK54_RS10730	0.84	+0.6
2,375,358	-		LRK54_RS10730	0.84	-0.6
2,375,358	-		LRK54_RS10730	0.84	-0.6
2,375,358	-		LRK54_RS10730	0.84	-0.1
2,375,358	-		LRK54_RS10730	0.84	-1.1
2,375,358	-		LRK54_RS10730	0.84	+0.2
2,375,435	+				-0.2
2,375,435	+				-2.5
2,375,435	+				+0.8
2,375,435	+				-0.2
2,375,435	+				-0.6
2,375,435	+				-0.9
2,375,435	+				-1.3
2,375,435	+				-1.0
2,375,435	+				+0.8
2,375,435	+				-2.1
2,375,435	+				-0.0
2,375,435	+				-0.3
2,375,435	+				-0.5
2,375,435	+				+0.5
2,375,435	+				+0.2
2,375,435	+				+0.2
2,375,435	+				-2.3
2,375,435	+				-0.2
2,375,435	+				+0.2
2,375,435	+				-0.8
2,375,435	+				+0.6
2,375,435	+				-2.0
2,375,436	-				-1.4
2,375,436	-				+0.6
2,375,436	-				+0.8
2,375,436	-				-1.4
2,375,436	-				-1.5
2,375,436	-				-0.5
2,375,436	-				+0.0
2,375,436	-				-2.5
2,375,436	-				-1.5
2,375,436	-				+0.8
2,375,436	-				+2.8
2,375,436	-				-1.3
2,375,436	-				+0.5
2,375,436	-				-0.6
2,375,436	-				+0.0
2,375,436	-				-0.5
2,375,436	-				-2.1
2,375,436	-				-2.4
2,375,436	-				-2.6
2,375,436	-				+0.2
2,375,472	+				-0.2
2,375,493	+				-1.1
2,375,495	+				+0.2
2,375,495	+				-1.8
2,375,495	+				+2.1
2,375,495	+				+1.8
2,375,495	+				-1.4
2,375,495	+				-2.0
2,375,495	+				-0.2
2,375,495	+				-0.1
2,375,495	+				-0.9
2,375,495	+				+1.6
2,375,495	+				-1.5
2,375,495	+				+0.8
2,375,496	-				+1.8
2,375,496	-				-2.1
2,375,496	-				-1.0
2,375,496	-				+1.6
2,375,496	-				-1.2
2,375,496	-				-2.5
2,375,496	-				+1.0
2,375,496	-				+1.2
2,375,496	-				+0.8
2,375,496	-				-1.4
2,375,496	-				+0.8
2,375,732	+				-1.9
2,375,732	+				+1.9
2,375,732	+				+3.4
2,375,732	+				+0.5
2,375,733	-				-1.5
2,375,733	-				+0.8
2,375,733	-				-1.2
2,375,733	-				+0.8
2,375,733	-				-1.0
2,375,733	-				+0.0
2,375,733	-				-0.6
2,375,993	+		LRK54_RS10735	0.27	+0.3
2,375,993	+		LRK54_RS10735	0.27	-0.8
2,375,993	+		LRK54_RS10735	0.27	-1.0
2,375,993	+		LRK54_RS10735	0.27	-0.8
2,375,993	+		LRK54_RS10735	0.27	-0.4
2,375,993	+		LRK54_RS10735	0.27	-1.0
2,375,993	+		LRK54_RS10735	0.27	+0.8
2,375,993	+		LRK54_RS10735	0.27	-0.1
2,375,993	+		LRK54_RS10735	0.27	-0.2
2,375,993	+		LRK54_RS10735	0.27	-0.5
2,375,993	+		LRK54_RS10735	0.27	+1.0
2,375,993	+		LRK54_RS10735	0.27	+0.6
2,375,993	+		LRK54_RS10735	0.27	-0.2
2,375,993	+		LRK54_RS10735	0.27	-1.2
2,375,994	-		LRK54_RS10735	0.27	+1.2
2,375,994	-		LRK54_RS10735	0.27	+0.3
2,375,994	-		LRK54_RS10735	0.27	+1.2
2,375,994	-		LRK54_RS10735	0.27	-0.7
2,375,994	-		LRK54_RS10735	0.27	-1.4
2,375,994	-		LRK54_RS10735	0.27	+0.6
2,375,994	-		LRK54_RS10735	0.27	+0.8
2,375,994	-		LRK54_RS10735	0.27	+1.8
2,375,994	-		LRK54_RS10735	0.27	+0.2
2,375,994	-		LRK54_RS10735	0.27	+0.9
2,375,994	-		LRK54_RS10735	0.27	+0.8
2,375,994	-		LRK54_RS10735	0.27	-0.2
2,376,125	+		LRK54_RS10735	0.36	-0.8
2,376,125	+		LRK54_RS10735	0.36	-0.8
2,376,125	+		LRK54_RS10735	0.36	+1.0
2,376,125	+		LRK54_RS10735	0.36	-0.5
2,376,125	+		LRK54_RS10735	0.36	+1.0
2,376,125	+		LRK54_RS10735	0.36	+0.0
2,376,125	+		LRK54_RS10735	0.36	+1.2
2,376,125	+		LRK54_RS10735	0.36	-1.8
2,376,125	+		LRK54_RS10735	0.36	+0.4
2,376,125	+		LRK54_RS10735	0.36	-1.1
2,376,125	+		LRK54_RS10735	0.36	-1.2
2,376,125	+		LRK54_RS10735	0.36	+0.2
2,376,125	+		LRK54_RS10735	0.36	+0.2
2,376,125	+		LRK54_RS10735	0.36	-1.9
2,376,125	+		LRK54_RS10735	0.36	-1.2
2,376,125	+		LRK54_RS10735	0.36	+0.2
2,376,126	-		LRK54_RS10735	0.36	-0.2
2,376,126	-		LRK54_RS10735	0.36	+2.1
2,376,126	-		LRK54_RS10735	0.36	+1.8
2,376,126	-		LRK54_RS10735	0.36	+0.2
2,376,126	-		LRK54_RS10735	0.36	-2.1
2,376,126	-		LRK54_RS10735	0.36	-0.5
2,376,126	-		LRK54_RS10735	0.36	+1.8
2,376,126	-		LRK54_RS10735	0.36	+3.4
2,376,126	-		LRK54_RS10735	0.36	+0.2
2,376,126	-		LRK54_RS10735	0.36	-2.7
2,376,126	-		LRK54_RS10735	0.36	-1.9
2,376,126	-		LRK54_RS10735	0.36	-1.2
2,376,126	-		LRK54_RS10735	0.36	-0.8
2,376,126	-		LRK54_RS10735	0.36	+0.2
2,376,227	+		LRK54_RS10735	0.43	-0.0
2,376,227	+		LRK54_RS10735	0.43	-0.2
2,376,228	-		LRK54_RS10735	0.43	-1.3
2,376,228	-		LRK54_RS10735	0.43	-0.8
2,376,228	-		LRK54_RS10735	0.43	-1.0
2,376,228	-		LRK54_RS10735	0.43	+0.4
2,376,359	+		LRK54_RS10735	0.52	-0.8
2,376,359	+		LRK54_RS10735	0.52	-2.5
2,376,359	+		LRK54_RS10735	0.52	-0.2
2,376,359	+		LRK54_RS10735	0.52	-0.1
2,376,359	+		LRK54_RS10735	0.52	-0.6
2,376,359	+		LRK54_RS10735	0.52	+1.2
2,376,359	+		LRK54_RS10735	0.52	-1.0
2,376,359	+		LRK54_RS10735	0.52	+0.8
2,376,359	+		LRK54_RS10735	0.52	+1.1
2,376,359	+		LRK54_RS10735	0.52	-0.9
2,376,359	+		LRK54_RS10735	0.52	-0.0
2,376,359	+		LRK54_RS10735	0.52	+0.8
2,376,360	-		LRK54_RS10735	0.52	-0.8
2,376,360	-		LRK54_RS10735	0.52	-1.4
2,376,360	-		LRK54_RS10735	0.52	-0.2
2,376,360	-		LRK54_RS10735	0.52	-1.6