Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09200

Experiment: Anaerobic, acetate donor; nitrate and iron electron acceptors

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron electron acceptors
2,014,477	+				+0.2
2,014,477	+				-1.3
2,014,477	+				-3.3
2,014,477	+				+1.3
2,014,477	+				+2.0
2,014,477	+				+0.7
2,014,477	+				+1.3
2,014,477	+				-0.2
2,014,477	+				-1.2
2,014,477	+				-0.0
2,014,477	+				-2.2
2,014,477	+				+0.6
2,014,477	+				+1.7
2,014,477	+				-0.4
2,014,477	+				+0.7
2,014,477	+				-0.6
2,014,477	+				+0.1
2,014,477	+				+1.0
2,014,477	+				-2.6
2,014,477	+				-1.4
2,014,477	+				-1.7
2,014,477	+				+0.5
2,014,477	+				-0.9
2,014,477	+				-0.4
2,014,477	+				+0.3
2,014,477	+				-0.9
2,014,478	-				-0.2
2,014,478	-				-1.0
2,014,478	-				-1.3
2,014,478	-				+0.5
2,014,478	-				-0.5
2,014,478	-				-0.1
2,014,478	-				-0.3
2,014,478	-				-0.4
2,014,478	-				-0.6
2,014,478	-				-2.4
2,014,478	-				-1.1
2,014,478	-				-0.3
2,014,478	-				-0.1
2,014,478	-				-0.3
2,014,478	-				+1.0
2,014,478	-				+0.1
2,014,478	-				+0.3
2,014,478	-				-2.9
2,014,478	-				+0.1
2,014,478	-				-0.6
2,014,478	-				+1.0
2,014,478	-				-1.1
2,014,536	+				-1.9
2,014,536	+				-0.6
2,014,536	+				+0.2
2,014,536	+				+0.3
2,014,536	+				-0.1
2,014,536	+				+0.2
2,014,536	+				+1.3
2,014,536	+				-2.2
2,014,536	+				-2.4
2,014,536	+				+0.7
2,014,536	+				+0.6
2,014,536	+				+0.7
2,014,536	+				+0.7
2,014,536	+				-3.1
2,014,536	+				+1.7
2,014,536	+				+0.7
2,014,536	+				+0.2
2,014,536	+				-1.4
2,014,536	+				-1.1
2,014,536	+				+2.1
2,014,536	+				+0.1
2,014,536	+				-0.3
2,014,536	+				+1.1
2,014,536	+				-0.6
2,014,536	+				-3.1
2,014,536	+				-1.1
2,014,536	+				-0.7
2,014,536	+				-0.3
2,014,536	+				+0.3
2,014,536	+				+2.9
2,014,536	+				-2.9
2,014,536	+				-0.3
2,014,536	+				-0.1
2,014,536	+				-0.3
2,014,536	+				+0.7
2,014,536	+				-0.6
2,014,536	+				-1.4
2,014,536	+				-1.6
2,014,536	+				-0.3
2,014,536	+				+0.9
2,014,536	+				-2.3
2,014,536	+				-2.0
2,014,536	+				+0.4
2,014,536	+				+0.6
2,014,537	-				+2.7
2,014,537	-				+0.3
2,014,537	-				+0.1
2,014,537	-				+0.1
2,014,537	-				-0.3
2,014,537	-				+0.6
2,014,537	-				+1.7
2,014,537	-				+0.4
2,014,537	-				-1.6
2,014,537	-				-0.3
2,014,537	-				-1.6
2,014,537	-				-1.4
2,014,537	-				+1.7
2,014,537	-				+0.1
2,014,537	-				+1.3
2,014,537	-				-2.1
2,014,537	-				-0.6
2,014,537	-				-0.9
2,014,537	-				+0.6
2,014,537	-				-0.5
2,014,537	-				-1.1
2,014,537	-				-0.7
2,014,537	-				-2.0
2,014,537	-				-1.7
2,014,537	-				-0.3
2,014,537	-				+0.3
2,014,537	-				+0.1
2,014,537	-				-0.3
2,014,537	-				-0.9
2,014,537	-				+0.1
2,014,537	-				-0.6
2,014,537	-				-1.2
2,014,537	-				+1.1
2,014,537	-				-1.7
2,014,537	-				-0.1
2,014,537	-				-2.1
2,014,537	-				+1.7
2,014,537	-				+0.2
2,014,537	-				-1.6
2,014,537	-				-0.3
2,014,537	-				-0.3
2,014,537	-				-1.0
2,014,537	-				-1.9
2,014,537	-				-2.1
2,014,537	-				+1.0
2,014,537	-				-0.1
2,014,537	-				+0.2
2,014,537	-				-0.3
2,014,537	-				+0.7
2,014,537	-				-1.4
2,014,537	-				+0.6
2,014,537	-				-2.0
2,014,733	+		LRK54_RS09195	0.22	+0.7
2,014,733	+		LRK54_RS09195	0.22	-0.9
2,014,733	+		LRK54_RS09195	0.22	+1.5
2,014,733	+		LRK54_RS09195	0.22	+1.0
2,014,733	+		LRK54_RS09195	0.22	+0.1
2,014,733	+		LRK54_RS09195	0.22	+0.1
2,014,734	-		LRK54_RS09195	0.22	-0.3
2,014,734	-		LRK54_RS09195	0.22	+0.4
2,014,734	-		LRK54_RS09195	0.22	-1.2
2,014,734	-		LRK54_RS09195	0.22	-1.4
2,014,734	-		LRK54_RS09195	0.22	-1.4
2,014,760	+		LRK54_RS09195	0.25	-1.0
2,014,760	+		LRK54_RS09195	0.25	+0.1
2,014,760	+		LRK54_RS09195	0.25	+1.5
2,014,760	+		LRK54_RS09195	0.25	-2.0
2,014,760	+		LRK54_RS09195	0.25	-0.0
2,014,760	+		LRK54_RS09195	0.25	-0.4
2,014,760	+		LRK54_RS09195	0.25	+0.1
2,014,761	-		LRK54_RS09195	0.25	+0.4
2,014,761	-		LRK54_RS09195	0.25	-0.3
2,014,761	-		LRK54_RS09195	0.25	+0.7
2,014,761	-		LRK54_RS09195	0.25	-0.3
2,014,761	-		LRK54_RS09195	0.25	-1.2
2,014,761	-		LRK54_RS09195	0.25	-0.5
2,014,761	-		LRK54_RS09195	0.25	-1.3
2,014,778	+		LRK54_RS09195	0.28	+0.3
2,014,778	+		LRK54_RS09195	0.28	+0.4
2,014,778	+		LRK54_RS09195	0.28	+4.0
2,014,778	+		LRK54_RS09195	0.28	+0.2
2,014,778	+		LRK54_RS09195	0.28	+1.5
2,014,778	+		LRK54_RS09195	0.28	-0.7
2,014,778	+		LRK54_RS09195	0.28	-0.1
2,014,778	+		LRK54_RS09195	0.28	+0.7
2,014,778	+		LRK54_RS09195	0.28	+0.3
2,014,778	+		LRK54_RS09195	0.28	-1.3
2,014,778	+		LRK54_RS09195	0.28	+0.1
2,014,778	+		LRK54_RS09195	0.28	+1.0
2,014,778	+		LRK54_RS09195	0.28	+0.4
2,014,778	+		LRK54_RS09195	0.28	-2.0
2,014,778	+		LRK54_RS09195	0.28	+0.7
2,014,778	+		LRK54_RS09195	0.28	+0.7
2,014,778	+		LRK54_RS09195	0.28	-1.9
2,014,778	+		LRK54_RS09195	0.28	+0.9
2,014,778	+		LRK54_RS09195	0.28	-0.6
2,014,778	+		LRK54_RS09195	0.28	-0.6
2,014,778	+		LRK54_RS09195	0.28	+0.2
2,014,778	+		LRK54_RS09195	0.28	-0.9
2,014,778	+		LRK54_RS09195	0.28	+1.0
2,014,778	+		LRK54_RS09195	0.28	-1.1
2,014,778	+		LRK54_RS09195	0.28	-0.8
2,014,779	-		LRK54_RS09195	0.28	+0.1
2,014,779	-		LRK54_RS09195	0.28	-0.9
2,014,779	-		LRK54_RS09195	0.28	-1.4
2,014,779	-		LRK54_RS09195	0.28	-0.2
2,014,779	-		LRK54_RS09195	0.28	-1.4
2,014,779	-		LRK54_RS09195	0.28	-0.3
2,014,779	-		LRK54_RS09195	0.28	-2.3
2,014,779	-		LRK54_RS09195	0.28	-0.3
2,014,779	-		LRK54_RS09195	0.28	-1.6
2,014,779	-		LRK54_RS09195	0.28	-1.9
2,014,779	-		LRK54_RS09195	0.28	+1.7
2,014,779	-		LRK54_RS09195	0.28	+0.7
2,014,779	-		LRK54_RS09195	0.28	-1.7
2,014,779	-		LRK54_RS09195	0.28	-0.3
2,014,779	-		LRK54_RS09195	0.28	-0.6
2,014,779	-		LRK54_RS09195	0.28	-1.7
2,014,779	-		LRK54_RS09195	0.28	+1.6
2,014,779	-		LRK54_RS09195	0.28	+0.7
2,014,779	-		LRK54_RS09195	0.28	+1.3
2,014,779	-		LRK54_RS09195	0.28	+0.7
2,014,779	-		LRK54_RS09195	0.28	+0.1
2,014,779	-		LRK54_RS09195	0.28	-2.6
2,014,779	-		LRK54_RS09195	0.28	-0.2
2,014,779	-		LRK54_RS09195	0.28	+1.7
2,014,779	-		LRK54_RS09195	0.28	-0.6
2,014,847	+		LRK54_RS09195	0.37	-0.9
2,014,847	+		LRK54_RS09195	0.37	+1.7
2,014,847	+		LRK54_RS09195	0.37	-0.4
2,014,847	+		LRK54_RS09195	0.37	+1.7
2,014,848	-		LRK54_RS09195	0.37	+0.7
2,014,848	-		LRK54_RS09195	0.37	+0.8
2,014,848	-		LRK54_RS09195	0.37	+0.9
2,014,848	-		LRK54_RS09195	0.37	+0.1
2,014,848	-		LRK54_RS09195	0.37	+0.7
2,014,889	+		LRK54_RS09195	0.42	+0.4
2,014,889	+		LRK54_RS09195	0.42	-0.8
2,014,889	+		LRK54_RS09195	0.42	+0.2
2,014,889	+		LRK54_RS09195	0.42	-1.6
2,014,889	+		LRK54_RS09195	0.42	-0.7
2,014,889	+		LRK54_RS09195	0.42	-0.3
2,014,889	+		LRK54_RS09195	0.42	-0.4
2,014,889	+		LRK54_RS09195	0.42	-0.3
2,014,889	+		LRK54_RS09195	0.42	+0.7
2,014,889	+		LRK54_RS09195	0.42	+0.1
2,014,889	+		LRK54_RS09195	0.42	+0.5
2,014,889	+		LRK54_RS09195	0.42	-2.4
2,014,889	+		LRK54_RS09195	0.42	+1.7
2,014,889	+		LRK54_RS09195	0.42	+0.3
2,014,889	+		LRK54_RS09195	0.42	+0.5
2,014,889	+		LRK54_RS09195	0.42	-0.6
2,014,889	+		LRK54_RS09195	0.42	+0.7
2,014,890	-		LRK54_RS09195	0.42	+2.7
2,014,890	-		LRK54_RS09195	0.42	+0.6
2,014,890	-		LRK54_RS09195	0.42	+0.1
2,014,890	-		LRK54_RS09195	0.42	-1.5
2,014,890	-		LRK54_RS09195	0.42	-1.3
2,014,890	-		LRK54_RS09195	0.42	-0.7
2,014,890	-		LRK54_RS09195	0.42	-1.8
2,014,890	-		LRK54_RS09195	0.42	+0.7
2,014,890	-		LRK54_RS09195	0.42	+0.5
2,014,890	-		LRK54_RS09195	0.42	-0.4
2,014,890	-		LRK54_RS09195	0.42	-0.9
2,014,994	+		LRK54_RS09195	0.56	-0.5
2,014,994	+		LRK54_RS09195	0.56	+4.0
2,014,994	+		LRK54_RS09195	0.56	-0.7
2,014,994	+		LRK54_RS09195	0.56	+0.9
2,014,994	+		LRK54_RS09195	0.56	+0.4
2,014,994	+		LRK54_RS09195	0.56	-1.4
2,014,994	+		LRK54_RS09195	0.56	+0.5
2,014,994	+		LRK54_RS09195	0.56	+1.0
2,014,995	-		LRK54_RS09195	0.56	-0.9
2,014,995	-		LRK54_RS09195	0.56	-0.9
2,014,995	-		LRK54_RS09195	0.56	-0.6
2,014,995	-		LRK54_RS09195	0.56	+0.2
2,014,995	-		LRK54_RS09195	0.56	-1.2
2,014,995	-		LRK54_RS09195	0.56	-0.3
2,014,995	-		LRK54_RS09195	0.56	+0.1
2,015,168	+		LRK54_RS09195	0.78	-2.6
2,015,168	+		LRK54_RS09195	0.78	+0.3
2,015,168	+		LRK54_RS09195	0.78	-1.3
2,015,168	+		LRK54_RS09195	0.78	-0.9
2,015,168	+		LRK54_RS09195	0.78	+0.1
2,015,168	+		LRK54_RS09195	0.78	+0.7
2,015,169	-		LRK54_RS09195	0.78	+0.7
2,015,169	-		LRK54_RS09195	0.78	-0.3
2,015,169	-		LRK54_RS09195	0.78	-0.7
2,015,169	-		LRK54_RS09195	0.78	-2.0
2,015,169	-		LRK54_RS09195	0.78	+1.3
2,015,169	-		LRK54_RS09195	0.78	+0.1
2,015,169	-		LRK54_RS09195	0.78	-0.6
2,015,169	-		LRK54_RS09195	0.78	-1.9
2,015,169	-		LRK54_RS09195	0.78	-0.9
2,015,169	-		LRK54_RS09195	0.78	-0.6
2,015,169	-		LRK54_RS09195	0.78	+0.7
2,015,169	-		LRK54_RS09195	0.78	-0.3
2,015,228	+		LRK54_RS09195	0.86	-1.2
2,015,228	+		LRK54_RS09195	0.86	+1.7
2,015,229	-		LRK54_RS09195	0.86	-0.9
2,015,229	-		LRK54_RS09195	0.86	-0.9
2,015,279	+				+0.5
2,015,279	+				+0.1
2,015,279	+				+0.8
2,015,280	-				+1.4
2,015,280	-				-1.7
2,015,280	-				-1.1
2,015,280	-				-0.7
2,015,312	+				+1.7
2,015,312	+				-0.3
2,015,312	+				+0.1
2,015,312	+				-0.6
2,015,312	+				+0.5
2,015,312	+				+1.1
2,015,312	+				-0.9
2,015,312	+				-0.6
2,015,312	+				+1.0
2,015,312	+				+0.7
2,015,312	+				+0.6
2,015,312	+				-0.4
2,015,312	+				+1.3
2,015,313	-				+0.0
2,015,313	-				+0.7
2,015,313	-				+2.0
2,015,313	-				+0.7
2,015,313	-				+1.6
2,015,313	-				-1.4
2,015,313	-				-1.0
2,015,313	-				+2.3
2,015,313	-				+0.2
2,015,313	-				+1.6
2,015,324	+				+1.7
2,015,324	+				-1.9
2,015,324	+				-0.1
2,015,324	+				-2.3
2,015,324	+				+0.7
2,015,324	+				+0.6
2,015,324	+				-1.3
2,015,324	+				+0.7
2,015,325	-				-0.3
2,015,325	-				+0.0
2,015,325	-				-0.1
2,015,365	+				-1.1
2,015,365	+				+0.7
2,015,365	+				-0.9
2,015,365	+				-3.6
2,015,365	+				-1.9
2,015,365	+				+0.1
2,015,366	-				-2.1
2,015,460	+		LRK54_RS09200	0.10	-1.7
2,015,460	+		LRK54_RS09200	0.10	-0.6
2,015,460	+		LRK54_RS09200	0.10	+0.7
2,015,460	+		LRK54_RS09200	0.10	+0.1
2,015,461	-		LRK54_RS09200	0.10	+0.1
2,015,461	-		LRK54_RS09200	0.10	-0.6
2,015,461	-		LRK54_RS09200	0.10	-0.3
2,015,461	-		LRK54_RS09200	0.10	-0.9
2,015,526	+		LRK54_RS09200	0.15	-0.6
2,015,526	+		LRK54_RS09200	0.15	+1.7
2,015,526	+		LRK54_RS09200	0.15	+0.1
2,015,526	+		LRK54_RS09200	0.15	-2.4
2,015,526	+		LRK54_RS09200	0.15	-1.7
2,015,526	+		LRK54_RS09200	0.15	-1.1
2,015,526	+		LRK54_RS09200	0.15	-1.1
2,015,526	+		LRK54_RS09200	0.15	-0.9
2,015,526	+		LRK54_RS09200	0.15	-0.9
2,015,526	+		LRK54_RS09200	0.15	-0.6
2,015,526	+		LRK54_RS09200	0.15	-0.3
2,015,526	+		LRK54_RS09200	0.15	-2.8
2,015,526	+		LRK54_RS09200	0.15	-0.9
2,015,526	+		LRK54_RS09200	0.15	-0.3
2,015,527	-		LRK54_RS09200	0.15	-0.1
2,015,527	-		LRK54_RS09200	0.15	+0.1
2,015,527	-		LRK54_RS09200	0.15	-0.9
2,015,527	-		LRK54_RS09200	0.15	-1.7
2,015,527	-		LRK54_RS09200	0.15	-0.6
2,015,527	-		LRK54_RS09200	0.15	-2.8
2,015,527	-		LRK54_RS09200	0.15	-1.3
2,015,527	-		LRK54_RS09200	0.15	-2.3
2,015,527	-		LRK54_RS09200	0.15	+1.7
2,015,527	-		LRK54_RS09200	0.15	+1.1
2,015,527	-		LRK54_RS09200	0.15	-2.4
2,015,527	-		LRK54_RS09200	0.15	-0.9
2,015,527	-		LRK54_RS09200	0.15	-2.4
2,015,527	-		LRK54_RS09200	0.15	-0.3
2,015,527	-		LRK54_RS09200	0.15	-0.3
2,015,671	+		LRK54_RS09200	0.26	+0.7
2,015,671	+		LRK54_RS09200	0.26	-3.3
2,015,672	-		LRK54_RS09200	0.26	-2.4
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2,015,800	-		LRK54_RS09200	0.36	-1.1
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2,015,883	+		LRK54_RS09200	0.42	-1.1
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2,015,959	+		LRK54_RS09200	0.48	-1.1
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2,015,959	+		LRK54_RS09200	0.48	-1.7
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2,016,174	+		LRK54_RS09200	0.65	-1.1
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2,016,175	-		LRK54_RS09200	0.65	+0.1
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2,016,175	-		LRK54_RS09200	0.65	-2.3
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2,016,291	+		LRK54_RS09200	0.74	-1.8
2,016,291	+		LRK54_RS09200	0.74	+0.1
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2,016,291	+		LRK54_RS09200	0.74	+0.1
2,016,291	+		LRK54_RS09200	0.74	-1.1
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2,016,291	+		LRK54_RS09200	0.74	+0.1
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2,016,291	+		LRK54_RS09200	0.74	+0.1
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2,016,436	-		LRK54_RS09200	0.85	+0.1
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2,016,525	+				+0.7
2,016,525	+				+0.1
2,016,525	+				+1.1
2,016,526	-				-1.9
2,016,526	-				+0.1
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2,016,636	+				-2.2
2,016,636	+				+1.7
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2,016,636	+				+0.8
2,016,636	+				-1.9
2,016,636	+				-1.3
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2,016,636	+				-1.3
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2,016,637	-				-1.7
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2,016,637	-				+1.7
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2,016,637	-				+1.1
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2,016,637	-				-1.3
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2,016,637	-				-1.8
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2,016,713	-				-1.2
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2,016,713	-				+0.1
2,016,713	-				-1.9
2,016,713	-				-1.3
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2,016,713	-				+0.1
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2,016,713	-				-1.0
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