Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07130

Experiment: Anaerobic, acetate donor; nitrate and iron electron acceptors

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate and iron electron acceptors
1,524,636	+				-0.6
1,524,637	-				-0.3
1,524,637	-				+0.5
1,524,876	+		LRK54_RS07125	0.20	-1.7
1,524,876	+		LRK54_RS07125	0.20	-1.5
1,524,876	+		LRK54_RS07125	0.20	-1.2
1,524,876	+		LRK54_RS07125	0.20	+0.4
1,524,876	+		LRK54_RS07125	0.20	-0.1
1,524,876	+		LRK54_RS07125	0.20	-0.3
1,524,876	+		LRK54_RS07125	0.20	-1.1
1,524,876	+		LRK54_RS07125	0.20	+2.0
1,524,877	-		LRK54_RS07125	0.20	-0.0
1,524,877	-		LRK54_RS07125	0.20	-1.3
1,524,877	-		LRK54_RS07125	0.20	+0.5
1,524,877	-		LRK54_RS07125	0.20	-0.8
1,524,877	-		LRK54_RS07125	0.20	-2.1
1,524,877	-		LRK54_RS07125	0.20	+0.7
1,524,877	-		LRK54_RS07125	0.20	-0.7
1,524,877	-		LRK54_RS07125	0.20	-0.4
1,524,877	-		LRK54_RS07125	0.20	-0.8
1,524,877	-		LRK54_RS07125	0.20	-2.3
1,525,050	+		LRK54_RS07125	0.39	-3.5
1,525,050	+		LRK54_RS07125	0.39	-3.0
1,525,050	+		LRK54_RS07125	0.39	-2.3
1,525,050	+		LRK54_RS07125	0.39	-0.5
1,525,050	+		LRK54_RS07125	0.39	-0.3
1,525,050	+		LRK54_RS07125	0.39	-0.9
1,525,050	+		LRK54_RS07125	0.39	+0.1
1,525,050	+		LRK54_RS07125	0.39	+1.2
1,525,050	+		LRK54_RS07125	0.39	-2.7
1,525,050	+		LRK54_RS07125	0.39	-0.4
1,525,050	+		LRK54_RS07125	0.39	-0.3
1,525,050	+		LRK54_RS07125	0.39	-0.0
1,525,050	+		LRK54_RS07125	0.39	+1.7
1,525,050	+		LRK54_RS07125	0.39	-1.2
1,525,050	+		LRK54_RS07125	0.39	-0.0
1,525,050	+		LRK54_RS07125	0.39	-1.5
1,525,050	+		LRK54_RS07125	0.39	+0.7
1,525,050	+		LRK54_RS07125	0.39	-0.9
1,525,050	+		LRK54_RS07125	0.39	-2.3
1,525,050	+		LRK54_RS07125	0.39	-1.7
1,525,050	+		LRK54_RS07125	0.39	-2.4
1,525,050	+		LRK54_RS07125	0.39	-1.3
1,525,050	+		LRK54_RS07125	0.39	-1.1
1,525,050	+		LRK54_RS07125	0.39	+1.7
1,525,050	+		LRK54_RS07125	0.39	-0.5
1,525,050	+		LRK54_RS07125	0.39	-1.1
1,525,051	-		LRK54_RS07125	0.39	-0.5
1,525,051	-		LRK54_RS07125	0.39	-0.5
1,525,051	-		LRK54_RS07125	0.39	-0.2
1,525,051	-		LRK54_RS07125	0.39	-2.7
1,525,051	-		LRK54_RS07125	0.39	+0.1
1,525,051	-		LRK54_RS07125	0.39	-0.0
1,525,051	-		LRK54_RS07125	0.39	-0.7
1,525,051	-		LRK54_RS07125	0.39	-1.3
1,525,051	-		LRK54_RS07125	0.39	-2.1
1,525,051	-		LRK54_RS07125	0.39	-0.3
1,525,051	-		LRK54_RS07125	0.39	+0.1
1,525,051	-		LRK54_RS07125	0.39	+0.6
1,525,051	-		LRK54_RS07125	0.39	-1.3
1,525,051	-		LRK54_RS07125	0.39	-1.7
1,525,051	-		LRK54_RS07125	0.39	-1.1
1,525,051	-		LRK54_RS07125	0.39	-1.3
1,525,051	-		LRK54_RS07125	0.39	-0.0
1,525,051	-		LRK54_RS07125	0.39	-0.8
1,525,051	-		LRK54_RS07125	0.39	-1.5
1,525,051	-		LRK54_RS07125	0.39	-1.9
1,525,051	-		LRK54_RS07125	0.39	-0.9
1,525,080	+		LRK54_RS07125	0.42	-0.5
1,525,081	-		LRK54_RS07125	0.42	+0.7
1,525,126	+		LRK54_RS07125	0.47	-2.1
1,525,173	+		LRK54_RS07125	0.52	-1.9
1,525,173	+		LRK54_RS07125	0.52	-0.1
1,525,173	+		LRK54_RS07125	0.52	-0.8
1,525,173	+		LRK54_RS07125	0.52	-1.1
1,525,174	-		LRK54_RS07125	0.53	-1.6
1,525,174	-		LRK54_RS07125	0.53	-1.3
1,525,174	-		LRK54_RS07125	0.53	-0.7
1,525,174	-		LRK54_RS07125	0.53	-0.0
1,525,182	+		LRK54_RS07125	0.53	-1.8
1,525,182	+		LRK54_RS07125	0.53	+1.7
1,525,182	+		LRK54_RS07125	0.53	-2.7
1,525,182	+		LRK54_RS07125	0.53	-1.1
1,525,182	+		LRK54_RS07125	0.53	-0.3
1,525,182	+		LRK54_RS07125	0.53	-1.8
1,525,182	+		LRK54_RS07125	0.53	-3.5
1,525,182	+		LRK54_RS07125	0.53	-0.3
1,525,182	+		LRK54_RS07125	0.53	+0.1
1,525,182	+		LRK54_RS07125	0.53	-2.1
1,525,182	+		LRK54_RS07125	0.53	-1.2
1,525,182	+		LRK54_RS07125	0.53	-1.6
1,525,182	+		LRK54_RS07125	0.53	-2.1
1,525,182	+		LRK54_RS07125	0.53	-0.7
1,525,182	+		LRK54_RS07125	0.53	-3.4
1,525,182	+		LRK54_RS07125	0.53	-0.8
1,525,183	-		LRK54_RS07125	0.54	-3.6
1,525,183	-		LRK54_RS07125	0.54	-1.7
1,525,183	-		LRK54_RS07125	0.54	-3.3
1,525,183	-		LRK54_RS07125	0.54	-1.7
1,525,183	-		LRK54_RS07125	0.54	-1.9
1,525,183	-		LRK54_RS07125	0.54	-2.0
1,525,183	-		LRK54_RS07125	0.54	-1.9
1,525,183	-		LRK54_RS07125	0.54	-1.8
1,525,183	-		LRK54_RS07125	0.54	-0.3
1,525,183	-		LRK54_RS07125	0.54	-1.3
1,525,183	-		LRK54_RS07125	0.54	+0.6
1,525,188	+		LRK54_RS07125	0.54	-1.5
1,525,188	+		LRK54_RS07125	0.54	-1.3
1,525,189	-		LRK54_RS07125	0.54	-1.3
1,525,189	-		LRK54_RS07125	0.54	-0.9
1,525,189	-		LRK54_RS07125	0.54	-1.7
1,525,206	+		LRK54_RS07125	0.56	-2.0
1,525,207	-		LRK54_RS07125	0.56	-0.2
1,525,278	+		LRK54_RS07125	0.64	-0.3
1,525,278	+		LRK54_RS07125	0.64	-1.1
1,525,278	+		LRK54_RS07125	0.64	+0.7
1,525,278	+		LRK54_RS07125	0.64	+0.9
1,525,278	+		LRK54_RS07125	0.64	-0.7
1,525,278	+		LRK54_RS07125	0.64	-0.7
1,525,278	+		LRK54_RS07125	0.64	-1.3
1,525,278	+		LRK54_RS07125	0.64	-2.8
1,525,279	-		LRK54_RS07125	0.64	-0.9
1,525,279	-		LRK54_RS07125	0.64	+1.2
1,525,279	-		LRK54_RS07125	0.64	-0.7
1,525,279	-		LRK54_RS07125	0.64	-0.0
1,525,279	-		LRK54_RS07125	0.64	+0.1
1,525,279	-		LRK54_RS07125	0.64	+3.2
1,525,279	-		LRK54_RS07125	0.64	+1.1
1,525,279	-		LRK54_RS07125	0.64	+0.2
1,525,279	-		LRK54_RS07125	0.64	+2.7
1,525,279	-		LRK54_RS07125	0.64	-1.0
1,525,464	+		LRK54_RS07125	0.84	-0.9
1,525,464	+		LRK54_RS07125	0.84	-1.5
1,525,465	-		LRK54_RS07125	0.84	+0.1
1,525,465	-		LRK54_RS07125	0.84	-1.0
1,525,465	-		LRK54_RS07125	0.84	-0.0
1,525,465	-		LRK54_RS07125	0.84	-1.6
1,525,483	+		LRK54_RS07125	0.86	-1.8
1,525,483	+		LRK54_RS07125	0.86	-1.7
1,525,483	+		LRK54_RS07125	0.86	-0.3
1,525,483	+		LRK54_RS07125	0.86	-0.3
1,525,483	+		LRK54_RS07125	0.86	+0.7
1,525,483	+		LRK54_RS07125	0.86	+0.1
1,525,483	+		LRK54_RS07125	0.86	+1.7
1,525,484	-		LRK54_RS07125	0.87	+0.6
1,525,484	-		LRK54_RS07125	0.87	-1.9
1,525,484	-		LRK54_RS07125	0.87	-0.4
1,525,484	-		LRK54_RS07125	0.87	-0.9
1,525,484	-		LRK54_RS07125	0.87	+1.7
1,525,484	-		LRK54_RS07125	0.87	-1.1
1,525,628	+				-0.2
1,525,628	+				-2.9
1,525,628	+				-2.5
1,525,628	+				+1.7
1,525,628	+				-3.6
1,525,628	+				-0.3
1,525,628	+				-1.4
1,525,628	+				-0.3
1,525,628	+				-0.5
1,525,628	+				+1.1
1,525,628	+				-0.7
1,525,628	+				-0.6
1,525,628	+				+0.3
1,525,628	+				-0.3
1,525,628	+				-0.7
1,525,628	+				-0.0
1,525,628	+				-2.4
1,525,628	+				-1.1
1,525,628	+				-0.7
1,525,628	+				-0.3
1,525,628	+				-1.0
1,525,628	+				-1.2
1,525,629	-				+0.9
1,525,629	-				+0.0
1,525,629	-				-2.4
1,525,629	-				-0.4
1,525,629	-				+0.7
1,525,629	-				-1.1
1,525,629	-				-1.6
1,525,629	-				-0.0
1,525,629	-				-0.9
1,525,629	-				-0.7
1,525,629	-				-1.1
1,525,629	-				-1.9
1,525,629	-				-1.1
1,525,629	-				-0.3
1,525,629	-				-1.1
1,525,629	-				-2.5
1,525,629	-				-0.3
1,525,629	-				-1.0
1,525,629	-				-1.4
1,525,629	-				-0.3
1,525,629	-				-0.7
1,525,629	-				-2.3
1,525,629	-				-0.3
1,525,629	-				-1.2
1,525,796	+		LRK54_RS07130	0.38	-2.9
1,525,796	+		LRK54_RS07130	0.38	+3.2
1,525,796	+		LRK54_RS07130	0.38	-2.2
1,525,796	+		LRK54_RS07130	0.38	-2.1
1,525,797	-		LRK54_RS07130	0.39	+1.1
1,525,797	-		LRK54_RS07130	0.39	-0.3
1,525,797	-		LRK54_RS07130	0.39	+0.2
1,525,797	-		LRK54_RS07130	0.39	-1.7
1,525,797	-		LRK54_RS07130	0.39	-2.5
1,526,091	+				-1.3
1,526,091	+				-2.1
1,526,146	-				+0.7
1,526,146	-				-0.3
1,526,146	-				+0.1
1,526,268	+				-0.3
1,526,268	+				-0.6
1,526,268	+				-0.7
1,526,268	+				-0.6
1,526,268	+				-0.7
1,526,268	+				-1.8
1,526,268	+				+0.1
1,526,269	-				-1.3
1,526,269	-				-0.9
1,526,269	-				-0.1
1,526,269	-				-1.1
1,526,269	-				-0.5
1,526,269	-				-0.9
1,526,269	-				-0.5
1,526,269	-				-1.9
1,526,269	-				+1.3
1,526,269	-				+0.4
1,526,547	+				-0.8
1,526,547	+				-2.1
1,526,547	+				-1.3
1,526,547	+				+0.3
1,526,547	+				-2.0
1,526,548	-				-0.1
1,526,548	-				-1.8
1,526,548	-				-0.9
1,526,548	-				-0.4
1,526,548	-				-1.1
1,526,548	-				+0.1
1,526,548	-				-1.7
1,526,919	+		LRK54_RS07135	0.19	+0.1
1,526,919	+		LRK54_RS07135	0.19	-0.7
1,526,920	-		LRK54_RS07135	0.19	-2.7
1,526,920	-		LRK54_RS07135	0.19	+0.1
1,526,920	-		LRK54_RS07135	0.19	+0.1
1,526,920	-		LRK54_RS07135	0.19	-0.3
1,526,920	-		LRK54_RS07135	0.19	-1.9
1,526,920	-		LRK54_RS07135	0.19	+0.7
1,526,920	-		LRK54_RS07135	0.19	-0.9
1,526,920	-		LRK54_RS07135	0.19	-2.4
1,526,928	+		LRK54_RS07135	0.19	-0.3
1,526,928	+		LRK54_RS07135	0.19	-0.1
1,526,929	-		LRK54_RS07135	0.19	+0.7
1,526,929	-		LRK54_RS07135	0.19	-0.7
1,526,929	-		LRK54_RS07135	0.19	-0.3
1,526,929	-		LRK54_RS07135	0.19	+1.0
1,526,929	-		LRK54_RS07135	0.19	-0.7
1,526,929	-		LRK54_RS07135	0.19	+0.1
1,526,929	-		LRK54_RS07135	0.19	-0.9
1,526,930	-		LRK54_RS07135	0.19	+1.7
1,526,935	-		LRK54_RS07135	0.20	-0.3
1,526,935	-		LRK54_RS07135	0.20	-1.5
1,526,940	+		LRK54_RS07135	0.20	+0.4
1,526,940	+		LRK54_RS07135	0.20	-1.7
1,526,940	+		LRK54_RS07135	0.20	+0.3
1,526,940	+		LRK54_RS07135	0.20	-1.1
1,526,940	+		LRK54_RS07135	0.20	+1.7
1,526,940	+		LRK54_RS07135	0.20	-1.4
1,526,940	+		LRK54_RS07135	0.20	-0.3
1,526,940	+		LRK54_RS07135	0.20	+0.2
1,526,940	+		LRK54_RS07135	0.20	+0.1
1,526,940	+		LRK54_RS07135	0.20	+1.0
1,526,940	+		LRK54_RS07135	0.20	-2.4
1,526,940	+		LRK54_RS07135	0.20	-0.7
1,526,940	+		LRK54_RS07135	0.20	+0.1
1,526,941	-		LRK54_RS07135	0.20	-1.8
1,526,941	-		LRK54_RS07135	0.20	-1.0
1,526,941	-		LRK54_RS07135	0.20	+0.1
1,526,941	-		LRK54_RS07135	0.20	-0.2
1,526,941	-		LRK54_RS07135	0.20	-0.3
1,526,941	-		LRK54_RS07135	0.20	-0.3
1,526,941	-		LRK54_RS07135	0.20	+0.7
1,526,941	-		LRK54_RS07135	0.20	-0.2
1,526,941	-		LRK54_RS07135	0.20	-2.5
1,526,941	-		LRK54_RS07135	0.20	+0.9
1,526,941	-		LRK54_RS07135	0.20	-0.7
1,526,941	-		LRK54_RS07135	0.20	-1.7
1,526,941	-		LRK54_RS07135	0.20	-0.7
1,526,941	-		LRK54_RS07135	0.20	-0.2
1,526,941	-		LRK54_RS07135	0.20	+0.4
1,526,941	-		LRK54_RS07135	0.20	-1.8
1,526,941	-		LRK54_RS07135	0.20	+2.1
1,526,941	-		LRK54_RS07135	0.20	+0.3
1,526,941	-		LRK54_RS07135	0.20	-0.2
1,526,941	-		LRK54_RS07135	0.20	-0.9
1,526,941	-		LRK54_RS07135	0.20	+0.1
1,526,941	-		LRK54_RS07135	0.20	+0.2
1,526,988	+		LRK54_RS07135	0.21	+4.0
1,526,988	+		LRK54_RS07135	0.21	+1.2
1,526,989	-		LRK54_RS07135	0.21	+0.1
1,527,001	-		LRK54_RS07135	0.22	+0.5
1,527,001	-		LRK54_RS07135	0.22	-0.9