Strain Fitness in Pantoea sp. MT58 around IAI47_16565

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
3,508,727	+				-0.2
3,508,727	+				-0.6
3,508,730	+				-0.1
3,508,730	+				-1.9
3,508,730	+				-0.1
3,508,730	+				-1.6
3,508,730	+				+0.0
3,508,730	+				-1.5
3,508,731	-				+0.2
3,508,731	-				-2.2
3,508,751	-				-0.9
3,508,751	-				+0.5
3,508,767	+				+0.8
3,508,767	+				+0.2
3,508,767	+				-0.1
3,508,768	-				-0.2
3,508,768	-				-0.6
3,508,768	-				+1.1
3,508,773	+				-0.4
3,508,773	+				+0.7
3,508,774	-				+0.2
3,508,801	+				+0.7
3,508,801	+				+0.1
3,508,801	+				-1.3
3,508,801	+				+0.4
3,508,801	+				+0.4
3,508,801	+				+1.8
3,508,802	-				-0.4
3,508,815	+				-1.9
3,508,818	+				-1.6
3,508,819	-				+0.6
3,508,819	-				-0.9
3,508,819	-				-1.9
3,508,823	+				-0.4
3,508,823	+				-0.7
3,508,824	-				+0.2
3,508,824	-				+0.4
3,508,824	-				+0.0
3,508,824	-				+0.5
3,508,824	-				-0.2
3,508,824	-				+0.5
3,508,832	+				-0.9
3,508,832	+				-0.3
3,508,863	+				-0.8
3,508,864	-				+1.5
3,508,874	+				-1.6
3,508,875	-				-0.8
3,508,883	+				-0.5
3,508,883	+				-1.0
3,508,907	+				-0.5
3,508,907	+				-1.3
3,508,907	+				+0.6
3,508,908	-				-2.6
3,508,918	+				-1.6
3,508,918	+				+1.5
3,508,918	+				-1.8
3,508,918	+				-1.4
3,508,918	+				-0.9
3,508,919	-				-0.6
3,508,919	-				-1.2
3,508,919	-				-0.0
3,508,919	-				-0.2
3,508,956	+				-2.1
3,508,957	-				-0.5
3,508,957	-				-0.1
3,508,962	+				-0.1
3,508,962	+				-1.5
3,508,962	+				-0.3
3,508,963	-				-0.1
3,508,963	-				+2.5
3,508,963	-				+0.4
3,508,963	-				-0.0
3,508,963	-				+0.2
3,508,963	-				-0.6
3,508,963	-				+1.4
3,508,963	-				-0.3
3,508,979	+				-1.0
3,508,979	+				-2.7
3,508,998	-				-0.9
3,509,030	+				+1.0
3,509,031	-				-1.1
3,509,031	-				-0.1
3,509,031	-				-1.7
3,509,061	+				+2.4
3,509,061	+				+0.9
3,509,062	-				-0.6
3,509,062	-				+0.5
3,509,062	-				-0.3
3,509,081	-				-0.1
3,509,081	-				+0.1
3,509,081	-				+1.0
3,509,105	+				+2.4
3,509,105	+				-0.5
3,509,122	+				-0.0
3,509,122	+				-0.5
3,509,122	+				-1.9
3,509,122	+				+0.9
3,509,122	+				+1.9
3,509,122	+				+0.5
3,509,122	+				-1.6
3,509,122	+				+0.7
3,509,123	-				+2.5
3,509,123	-				+0.3
3,509,123	-				-1.6
3,509,123	-				-0.3
3,509,123	-				+5.6
3,509,123	-				-0.9
3,509,172	+				-0.6
3,509,203	-		IAI47_16560	0.13	+1.7
3,509,203	-		IAI47_16560	0.13	-1.3
3,509,206	-		IAI47_16560	0.14	-0.5
3,509,206	-		IAI47_16560	0.14	-1.2
3,509,206	-		IAI47_16560	0.14	-0.1
3,509,206	-		IAI47_16560	0.14	-0.8
3,509,226	+		IAI47_16560	0.17	-2.0
3,509,227	-		IAI47_16560	0.17	+0.1
3,509,237	-		IAI47_16560	0.19	+0.4
3,509,245	-		IAI47_16560	0.20	-1.1
3,509,245	-		IAI47_16560	0.20	+1.2
3,509,245	-		IAI47_16560	0.20	-0.6
3,509,299	-		IAI47_16560	0.29	-2.0
3,509,299	-		IAI47_16560	0.29	+1.8
3,509,299	-		IAI47_16560	0.29	-0.6
3,509,302	-		IAI47_16560	0.30	-2.0
3,509,302	-		IAI47_16560	0.30	-1.8
3,509,319	-		IAI47_16560	0.33	+1.5
3,509,326	-		IAI47_16560	0.34	+0.0
3,509,420	-		IAI47_16560	0.49	-1.2
3,509,420	-		IAI47_16560	0.49	-0.7
3,509,420	-		IAI47_16560	0.49	+0.2
3,509,425	-		IAI47_16560	0.50	-2.3
3,509,425	-		IAI47_16560	0.50	-1.2
3,509,490	-		IAI47_16560	0.61	-1.8
3,509,495	-		IAI47_16560	0.62	-1.5
3,509,495	-		IAI47_16560	0.62	-0.6
3,509,500	-		IAI47_16560	0.63	-1.0
3,509,508	-		IAI47_16560	0.64	-0.8
3,509,588	-		IAI47_16560	0.77	-0.6
3,509,609	-		IAI47_16560	0.81	-2.0
3,509,609	-		IAI47_16560	0.81	-2.1
3,509,630	-		IAI47_16560	0.84	-0.8
3,509,643	-		IAI47_16560	0.86	+0.3
3,509,646	-		IAI47_16560	0.87	-0.6
3,509,684	-				+0.1
3,509,697	+				+0.2
3,509,698	-				-1.7
3,509,712	+				+0.2
3,509,720	-				-3.3
3,509,739	+				-0.8
3,509,767	-				-0.2
3,509,773	+				-0.8
3,509,834	-		IAI47_16565	0.12	-0.4
3,509,884	+		IAI47_16565	0.17	-1.5
3,509,885	-		IAI47_16565	0.17	-1.9
3,509,885	-		IAI47_16565	0.17	+0.2
3,509,894	+		IAI47_16565	0.18	+0.3
3,509,894	+		IAI47_16565	0.18	+0.1
3,509,894	+		IAI47_16565	0.18	-0.6
3,509,915	+		IAI47_16565	0.20	+4.5
3,509,920	+		IAI47_16565	0.20	-1.4
3,509,920	+		IAI47_16565	0.20	+0.0
3,509,920	+		IAI47_16565	0.20	-0.6
3,509,921	-		IAI47_16565	0.21	-1.3
3,509,921	-		IAI47_16565	0.21	-0.6
3,509,921	-		IAI47_16565	0.21	-1.5
3,509,921	-		IAI47_16565	0.21	-2.9
3,509,922	+		IAI47_16565	0.21	-1.7
3,509,923	+		IAI47_16565	0.21	-0.2
3,509,923	-		IAI47_16565	0.21	-0.8
3,509,923	-		IAI47_16565	0.21	+0.2
3,509,972	+		IAI47_16565	0.26	-0.7
3,510,008	+		IAI47_16565	0.30	+0.0
3,510,008	+		IAI47_16565	0.30	-1.1
3,510,014	+		IAI47_16565	0.30	-0.4
3,510,014	+		IAI47_16565	0.30	+2.7
3,510,015	-		IAI47_16565	0.30	-1.7
3,510,017	+		IAI47_16565	0.30	+0.9
3,510,045	+		IAI47_16565	0.33	+0.5
3,510,055	+		IAI47_16565	0.34	-0.5
3,510,056	-		IAI47_16565	0.34	-1.0
3,510,056	-		IAI47_16565	0.34	+0.0
3,510,056	-		IAI47_16565	0.34	-1.3
3,510,102	-		IAI47_16565	0.39	-2.1
3,510,102	-		IAI47_16565	0.39	-0.8
3,510,138	+		IAI47_16565	0.43	-1.1
3,510,139	-		IAI47_16565	0.43	-2.9
3,510,139	-		IAI47_16565	0.43	-1.9
3,510,144	+		IAI47_16565	0.44	+1.0
3,510,144	+		IAI47_16565	0.44	-2.3
3,510,144	+		IAI47_16565	0.44	+0.7
3,510,145	-		IAI47_16565	0.44	-1.5
3,510,156	-		IAI47_16565	0.45	-0.0
3,510,156	-		IAI47_16565	0.45	-0.8
3,510,156	-		IAI47_16565	0.45	-2.7
3,510,174	-		IAI47_16565	0.47	-2.1
3,510,183	+		IAI47_16565	0.48	+0.0
3,510,183	+		IAI47_16565	0.48	-0.6
3,510,184	-		IAI47_16565	0.48	-0.8
3,510,204	+		IAI47_16565	0.50	-1.4
3,510,204	+		IAI47_16565	0.50	-1.7
3,510,204	+		IAI47_16565	0.50	+1.5
3,510,205	-		IAI47_16565	0.50	-0.5
3,510,208	+		IAI47_16565	0.50	+0.4
3,510,208	+		IAI47_16565	0.50	-1.1
3,510,208	+		IAI47_16565	0.50	-0.1
3,510,208	+		IAI47_16565	0.50	-0.4
3,510,208	+		IAI47_16565	0.50	+2.3
3,510,208	+		IAI47_16565	0.50	+0.1
3,510,209	-		IAI47_16565	0.50	-0.1
3,510,209	-		IAI47_16565	0.50	+0.0
3,510,209	-		IAI47_16565	0.50	-0.6
3,510,209	-		IAI47_16565	0.50	-0.1
3,510,209	-		IAI47_16565	0.50	+0.7
3,510,214	-		IAI47_16565	0.51	-1.6
3,510,214	-		IAI47_16565	0.51	-0.6
3,510,214	-		IAI47_16565	0.51	-0.7
3,510,272	+		IAI47_16565	0.57	+0.7
3,510,272	+		IAI47_16565	0.57	-0.7
3,510,273	-		IAI47_16565	0.57	-1.5
3,510,273	-		IAI47_16565	0.57	-0.7
3,510,273	-		IAI47_16565	0.57	-1.0
3,510,278	+		IAI47_16565	0.57	-0.3
3,510,278	+		IAI47_16565	0.57	-2.5
3,510,278	+		IAI47_16565	0.57	+1.5
3,510,278	+		IAI47_16565	0.57	-0.3
3,510,278	+		IAI47_16565	0.57	+0.9
3,510,278	+		IAI47_16565	0.57	-0.3
3,510,278	+		IAI47_16565	0.57	-0.5
3,510,279	-		IAI47_16565	0.57	-0.2
3,510,279	-		IAI47_16565	0.57	+0.3
3,510,281	+		IAI47_16565	0.58	-0.7
3,510,282	-		IAI47_16565	0.58	-0.4
3,510,282	-		IAI47_16565	0.58	-0.8
3,510,282	-		IAI47_16565	0.58	-0.2
3,510,282	-		IAI47_16565	0.58	+0.1
3,510,302	-		IAI47_16565	0.60	+0.4
3,510,302	-		IAI47_16565	0.60	-1.8
3,510,351	+		IAI47_16565	0.65	-0.2
3,510,351	+		IAI47_16565	0.65	-0.5
3,510,351	+		IAI47_16565	0.65	+0.5
3,510,351	+		IAI47_16565	0.65	+0.0
3,510,351	+		IAI47_16565	0.65	+0.4
3,510,351	+		IAI47_16565	0.65	+1.2
3,510,351	+		IAI47_16565	0.65	-0.0
3,510,351	+		IAI47_16565	0.65	+1.4
3,510,352	-		IAI47_16565	0.65	-0.2
3,510,352	-		IAI47_16565	0.65	-1.5
3,510,352	-		IAI47_16565	0.65	-0.6
3,510,352	-		IAI47_16565	0.65	+2.2
3,510,352	-		IAI47_16565	0.65	-0.3
3,510,354	+		IAI47_16565	0.65	+0.6
3,510,354	+		IAI47_16565	0.65	+0.2
3,510,354	+		IAI47_16565	0.65	+1.1
3,510,354	+		IAI47_16565	0.65	-0.1
3,510,355	-		IAI47_16565	0.65	-1.4
3,510,355	-		IAI47_16565	0.65	+0.9
3,510,355	-		IAI47_16565	0.65	+2.0
3,510,372	+		IAI47_16565	0.67	-1.2
3,510,373	-		IAI47_16565	0.67	-1.9
3,510,373	-		IAI47_16565	0.67	-1.0
3,510,373	-		IAI47_16565	0.67	-1.1
3,510,530	+		IAI47_16565	0.83	-0.4
3,510,530	+		IAI47_16565	0.83	+1.6
3,510,531	-		IAI47_16565	0.83	-0.1
3,510,531	-		IAI47_16565	0.83	-3.0
3,510,531	-		IAI47_16565	0.83	-1.2
3,510,578	+		IAI47_16565	0.88	-0.5
3,510,612	+				+0.6
3,510,629	+				+0.5
3,510,629	+				+0.2
3,510,629	+				+0.6
3,510,630	-				+1.2
3,510,630	-				-0.4
3,510,630	-				-0.1
3,510,632	+				-0.1
3,510,632	+				-1.9
3,510,632	+				+3.8
3,510,633	-				-1.8
3,510,648	+				-0.4
3,510,648	+				+0.9
3,510,648	+				-1.3
3,510,648	+				+0.4
3,510,648	+				-1.3
3,510,648	+				-0.3
3,510,649	-				-1.8
3,510,649	-				-1.2
3,510,649	-				-0.8
3,510,649	-				-1.2
3,510,649	-				-1.1
3,510,649	-				-0.7
3,510,649	-				-1.3
3,510,655	+				+1.1
3,510,655	+				+2.5
3,510,655	+				-0.3
3,510,655	+				+0.8
3,510,655	+				-0.9
3,510,656	-				-1.2
3,510,656	-				-0.2
3,510,656	-				-2.3
3,510,666	+				+0.7
3,510,667	-				+0.1
3,510,667	-				-0.3
3,510,667	-				-0.3
3,510,680	+				+2.1
3,510,680	+				+2.2
3,510,681	-				-1.7
3,510,686	+				-0.3
3,510,687	-				-0.3
3,510,694	+				+0.2
3,510,695	-				-2.1
3,510,716	+				-1.1
3,510,716	+				-0.5
3,510,716	+				-0.4
3,510,716	+				-0.8
3,510,716	+				+0.5
3,510,716	+				-1.0
3,510,716	+				+0.5
3,510,716	+				+0.7
3,510,717	-				+0.5
3,510,717	-				-0.5
3,510,717	-				-0.6
3,510,717	-				-1.1
3,510,717	-				+1.5
3,510,717	-				-1.3
3,510,720	+				-0.9
3,510,720	+				-1.3
3,510,720	+				+0.0
3,510,720	+				-0.4
3,510,720	+				-0.2
3,510,720	+				-0.9
3,510,720	+				-0.0
3,510,720	+				-1.8
3,510,720	+				+0.3
3,510,720	+				-0.1
3,510,720	+				+0.4
3,510,720	+				+0.2
3,510,720	+				-0.1
3,510,720	+				+0.2
3,510,720	+				+1.4
3,510,720	+				-1.2
3,510,720	+				+0.2
3,510,720	+				+0.7
3,510,720	+				+0.9
3,510,721	-				-0.8
3,510,721	-				+2.4
3,510,721	-				-1.2
3,510,721	-				-1.1
3,510,721	-				+1.2
3,510,721	-				+0.2
3,510,721	-				-1.2
3,510,721	-				-1.4
3,510,721	-				-1.9
3,510,721	-				-0.1
3,510,721	-				-0.7
3,510,721	-				+0.3
3,510,738	+				+0.1
3,510,739	-				+0.4
3,510,820	-				-3.0
3,510,820	-				-1.6
3,510,851	-				-1.3
3,510,861	+				-0.3
3,510,861	+				+0.1
3,510,862	-				+0.4
3,510,902	+				-0.8
3,510,902	+				-0.9
3,510,903	-				-0.8
3,510,903	-				-0.3
3,510,903	-				-0.0
3,510,903	-				-0.3
3,510,906	+				-2.2
3,510,970	-		IAI47_16570	0.13	+0.4
3,511,000	+		IAI47_16570	0.15	-0.1
3,511,001	+		IAI47_16570	0.15	-0.6
3,511,001	+		IAI47_16570	0.15	-0.6
3,511,002	-		IAI47_16570	0.15	-1.9
3,511,002	-		IAI47_16570	0.15	-0.8
3,511,002	-		IAI47_16570	0.15	-2.9
3,511,011	+		IAI47_16570	0.15	-0.1
3,511,011	+		IAI47_16570	0.15	-0.4
3,511,011	+		IAI47_16570	0.15	-0.4
3,511,024	+		IAI47_16570	0.16	+0.1
3,511,024	+		IAI47_16570	0.16	-1.6
3,511,024	+		IAI47_16570	0.16	-1.9
3,511,024	+		IAI47_16570	0.16	+1.3
3,511,024	+		IAI47_16570	0.16	+0.5
3,511,025	-		IAI47_16570	0.16	-0.1
3,511,025	-		IAI47_16570	0.16	-1.0
3,511,025	-		IAI47_16570	0.16	-0.1
3,511,025	-		IAI47_16570	0.16	+0.7
3,511,025	-		IAI47_16570	0.16	+0.2
3,511,025	-		IAI47_16570	0.16	-0.7
3,511,025	-		IAI47_16570	0.16	+0.5
3,511,025	-		IAI47_16570	0.16	+0.2
3,511,025	-		IAI47_16570	0.16	-1.6
3,511,026	+		IAI47_16570	0.16	-0.2
3,511,026	+		IAI47_16570	0.16	+1.2
3,511,027	-		IAI47_16570	0.16	-0.2
3,511,035	+		IAI47_16570	0.16	+0.6
3,511,035	+		IAI47_16570	0.16	-0.7
3,511,035	+		IAI47_16570	0.16	+1.5
3,511,035	+		IAI47_16570	0.16	-0.5
3,511,036	-		IAI47_16570	0.16	+0.4
3,511,036	-		IAI47_16570	0.16	+1.7
3,511,036	-		IAI47_16570	0.16	+0.9
3,511,062	+		IAI47_16570	0.18	-1.2
3,511,062	+		IAI47_16570	0.18	-1.6
3,511,063	-		IAI47_16570	0.18	-1.7
3,511,066	+		IAI47_16570	0.18	-1.1
3,511,066	+		IAI47_16570	0.18	-0.0
3,511,066	+		IAI47_16570	0.18	-0.6
3,511,066	+		IAI47_16570	0.18	-0.2
3,511,066	+		IAI47_16570	0.18	+0.5
3,511,066	+		IAI47_16570	0.18	+1.6
3,511,066	+		IAI47_16570	0.18	+0.1
3,511,066	+		IAI47_16570	0.18	-0.7
3,511,066	+		IAI47_16570	0.18	-0.1
3,511,067	-		IAI47_16570	0.18	-0.8
3,511,067	-		IAI47_16570	0.18	+1.4
3,511,067	-		IAI47_16570	0.18	-0.2
3,511,067	-		IAI47_16570	0.18	-1.9
3,511,067	-		IAI47_16570	0.18	-0.4
3,511,067	-		IAI47_16570	0.18	-0.5
3,511,112	+		IAI47_16570	0.20	+2.9
3,511,113	-		IAI47_16570	0.20	+0.1
3,511,157	+		IAI47_16570	0.23	+0.5
3,511,157	+		IAI47_16570	0.23	-0.8
3,511,158	-		IAI47_16570	0.23	+1.3
3,511,164	+		IAI47_16570	0.23	-0.1
3,511,239	+		IAI47_16570	0.27	+0.5
3,511,273	+		IAI47_16570	0.29	+2.0
3,511,273	+		IAI47_16570	0.29	+0.9
3,511,273	+		IAI47_16570	0.29	+0.8
3,511,274	-		IAI47_16570	0.29	-0.9
3,511,274	-		IAI47_16570	0.29	+0.4
3,511,274	-		IAI47_16570	0.29	-0.3
3,511,274	-		IAI47_16570	0.29	-0.1
3,511,274	-		IAI47_16570	0.29	+0.4
3,511,274	-		IAI47_16570	0.29	-0.7
3,511,274	-		IAI47_16570	0.29	-0.1
3,511,274	-		IAI47_16570	0.29	-0.2
3,511,276	-		IAI47_16570	0.29	+0.1
3,511,302	-		IAI47_16570	0.30	-1.6
3,511,401	+		IAI47_16570	0.36	-2.9
3,511,401	+		IAI47_16570	0.36	-1.8
3,511,401	+		IAI47_16570	0.36	-1.4
3,511,402	-		IAI47_16570	0.36	-2.0
3,511,521	+		IAI47_16570	0.42	-0.1
3,511,521	+		IAI47_16570	0.42	-0.6
3,511,521	+		IAI47_16570	0.42	-0.5
3,511,521	+		IAI47_16570	0.42	+1.7
3,511,521	+		IAI47_16570	0.42	+2.2
3,511,521	+		IAI47_16570	0.42	-2.3
3,511,521	+		IAI47_16570	0.42	-0.1
3,511,521	+		IAI47_16570	0.42	+0.1
3,511,522	-		IAI47_16570	0.42	-0.3
3,511,522	-		IAI47_16570	0.42	+0.5
3,511,522	-		IAI47_16570	0.42	+0.3
3,511,522	-		IAI47_16570	0.42	+0.3
3,511,522	-		IAI47_16570	0.42	-0.4
3,511,522	-		IAI47_16570	0.42	-1.2
3,511,529	+		IAI47_16570	0.42	+0.6
3,511,529	+		IAI47_16570	0.42	-0.8
3,511,530	-		IAI47_16570	0.42	-1.1
3,511,563	+		IAI47_16570	0.44	+1.1
3,511,563	+		IAI47_16570	0.44	+0.5
3,511,564	-		IAI47_16570	0.44	+0.3
3,511,564	-		IAI47_16570	0.44	+1.2
3,511,575	-		IAI47_16570	0.45	-0.8
3,511,575	-		IAI47_16570	0.45	-0.4
3,511,659	+		IAI47_16570	0.49	-1.3
3,511,660	-		IAI47_16570	0.49	-0.1
3,511,660	-		IAI47_16570	0.49	+1.5
3,511,667	+		IAI47_16570	0.49	+0.2
3,511,668	-		IAI47_16570	0.49	-0.7
3,511,668	-		IAI47_16570	0.49	+0.8