Strain Fitness in Pantoea sp. MT58 around IAI47_16555

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
3,504,101	+		IAI47_16550	0.42	-0.5
3,504,101	+		IAI47_16550	0.42	-0.8
3,504,101	+		IAI47_16550	0.42	-0.1
3,504,101	+		IAI47_16550	0.42	-0.2
3,504,102	-		IAI47_16550	0.42	-0.1
3,504,102	-		IAI47_16550	0.42	-1.2
3,504,102	-		IAI47_16550	0.42	-0.3
3,504,102	-		IAI47_16550	0.42	-0.3
3,504,143	-		IAI47_16550	0.44	+1.5
3,504,152	-		IAI47_16550	0.45	-0.2
3,504,152	-		IAI47_16550	0.45	+0.1
3,504,152	-		IAI47_16550	0.45	-0.1
3,504,191	-		IAI47_16550	0.47	+0.6
3,504,326	+		IAI47_16550	0.56	+0.1
3,504,326	+		IAI47_16550	0.56	-0.7
3,504,326	+		IAI47_16550	0.56	-1.4
3,504,326	+		IAI47_16550	0.56	-0.5
3,504,326	+		IAI47_16550	0.56	+0.4
3,504,326	+		IAI47_16550	0.56	-0.3
3,504,327	-		IAI47_16550	0.56	+1.1
3,504,327	-		IAI47_16550	0.56	-1.8
3,504,327	-		IAI47_16550	0.56	-0.4
3,504,327	-		IAI47_16550	0.56	+0.2
3,504,327	-		IAI47_16550	0.56	+0.7
3,504,327	-		IAI47_16550	0.56	+0.1
3,504,422	-		IAI47_16550	0.62	+0.3
3,504,422	-		IAI47_16550	0.62	+1.0
3,504,497	-		IAI47_16550	0.67	-1.0
3,504,515	+		IAI47_16550	0.68	+1.2
3,504,516	-		IAI47_16550	0.68	+0.3
3,504,551	-		IAI47_16550	0.70	-0.7
3,504,551	-		IAI47_16550	0.70	+3.1
3,504,551	-		IAI47_16550	0.70	+1.2
3,504,582	+		IAI47_16550	0.72	-0.9
3,504,582	+		IAI47_16550	0.72	-0.7
3,504,582	+		IAI47_16550	0.72	-0.4
3,504,582	+		IAI47_16550	0.72	-1.2
3,504,582	+		IAI47_16550	0.72	-1.8
3,504,583	-		IAI47_16550	0.72	+0.2
3,504,583	-		IAI47_16550	0.72	-1.4
3,504,636	+		IAI47_16550	0.75	-0.5
3,504,636	+		IAI47_16550	0.75	+3.3
3,504,636	+		IAI47_16550	0.75	-0.6
3,504,636	+		IAI47_16550	0.75	+0.8
3,504,636	+		IAI47_16550	0.75	-0.1
3,504,636	+		IAI47_16550	0.75	-0.3
3,504,636	+		IAI47_16550	0.75	-0.3
3,504,636	+		IAI47_16550	0.75	-0.3
3,504,636	+		IAI47_16550	0.75	+1.3
3,504,636	+		IAI47_16550	0.75	-0.6
3,504,636	+		IAI47_16550	0.75	-0.3
3,504,636	+		IAI47_16550	0.75	-0.3
3,504,636	+		IAI47_16550	0.75	-0.5
3,504,636	+		IAI47_16550	0.75	-0.6
3,504,637	-		IAI47_16550	0.75	-0.1
3,504,637	-		IAI47_16550	0.75	-0.3
3,504,637	-		IAI47_16550	0.75	+0.1
3,504,637	-		IAI47_16550	0.75	-2.2
3,504,637	-		IAI47_16550	0.75	-0.2
3,504,637	-		IAI47_16550	0.75	-0.1
3,504,637	-		IAI47_16550	0.75	+0.9
3,504,637	-		IAI47_16550	0.75	-2.2
3,504,637	-		IAI47_16550	0.75	+2.1
3,504,637	-		IAI47_16550	0.75	-0.7
3,504,637	-		IAI47_16550	0.75	-1.6
3,504,637	-		IAI47_16550	0.75	-1.4
3,504,637	-		IAI47_16550	0.75	-0.5
3,504,640	+		IAI47_16550	0.76	-0.2
3,504,640	+		IAI47_16550	0.76	+0.7
3,504,640	+		IAI47_16550	0.76	-0.1
3,504,640	+		IAI47_16550	0.76	-2.3
3,504,641	-		IAI47_16550	0.76	+0.4
3,504,679	+		IAI47_16550	0.78	-0.8
3,504,680	-		IAI47_16550	0.78	-1.0
3,504,680	-		IAI47_16550	0.78	-0.2
3,504,681	+		IAI47_16550	0.78	-0.8
3,504,681	+		IAI47_16550	0.78	+0.0
3,504,681	+		IAI47_16550	0.78	-0.2
3,504,681	+		IAI47_16550	0.78	+0.4
3,504,681	+		IAI47_16550	0.78	-1.3
3,504,681	+		IAI47_16550	0.78	-0.6
3,504,681	+		IAI47_16550	0.78	+2.0
3,504,682	-		IAI47_16550	0.78	-0.3
3,504,682	-		IAI47_16550	0.78	+0.9
3,504,682	-		IAI47_16550	0.78	+0.4
3,504,682	-		IAI47_16550	0.78	-0.1
3,504,682	-		IAI47_16550	0.78	-1.6
3,504,700	+		IAI47_16550	0.79	-0.2
3,504,700	+		IAI47_16550	0.79	-1.3
3,504,762	-		IAI47_16550	0.83	+0.0
3,504,762	-		IAI47_16550	0.83	-1.5
3,504,812	-		IAI47_16550	0.86	+0.9
3,504,851	+		IAI47_16550	0.89	-1.8
3,504,852	-		IAI47_16550	0.89	+0.2
3,504,852	-		IAI47_16550	0.89	-1.8
3,504,852	-		IAI47_16550	0.89	-0.7
3,504,882	+				-1.2
3,504,882	+				+0.1
3,504,883	-				-1.9
3,504,908	-				-1.7
3,504,948	+				-0.3
3,504,949	-				+2.1
3,504,957	+				+0.8
3,504,958	-				-1.2
3,505,040	-				+1.2
3,505,044	-				+1.3
3,505,094	-				+2.4
3,505,101	+				+1.9
3,505,123	-				-1.6
3,505,135	+				-0.2
3,505,136	-				-0.3
3,505,136	-				-0.3
3,505,136	-				+0.4
3,505,279	+				-0.4
3,505,280	-				+0.0
3,505,313	+				-1.1
3,505,313	+				-1.8
3,505,314	-				-0.4
3,505,314	-				+0.7
3,505,314	-				+0.3
3,505,314	-				-0.0
3,505,355	+				+1.5
3,505,385	-				+0.1
3,505,408	+				-0.8
3,505,409	-				-0.6
3,505,409	-				+1.9
3,505,507	+		IAI47_16555	0.12	-2.1
3,505,507	+		IAI47_16555	0.12	+1.5
3,505,508	-		IAI47_16555	0.12	+0.2
3,505,525	+		IAI47_16555	0.12	-0.3
3,505,569	-		IAI47_16555	0.13	-0.2
3,505,569	-		IAI47_16555	0.13	+0.9
3,505,611	+		IAI47_16555	0.15	-0.8
3,505,612	-		IAI47_16555	0.15	+3.5
3,505,612	-		IAI47_16555	0.15	-0.0
3,505,612	-		IAI47_16555	0.15	-2.1
3,505,621	-		IAI47_16555	0.15	-0.0
3,505,630	+		IAI47_16555	0.15	-0.4
3,505,630	+		IAI47_16555	0.15	-0.1
3,505,631	-		IAI47_16555	0.15	-2.0
3,505,631	-		IAI47_16555	0.15	+0.9
3,505,631	-		IAI47_16555	0.15	+0.5
3,505,631	-		IAI47_16555	0.15	+0.5
3,505,654	+		IAI47_16555	0.16	-1.9
3,505,654	+		IAI47_16555	0.16	-2.1
3,505,655	-		IAI47_16555	0.16	-1.4
3,505,655	-		IAI47_16555	0.16	+0.1
3,505,655	-		IAI47_16555	0.16	-0.3
3,505,690	+		IAI47_16555	0.17	-1.1
3,505,690	+		IAI47_16555	0.17	-0.2
3,505,690	+		IAI47_16555	0.17	-1.9
3,505,690	+		IAI47_16555	0.17	+0.9
3,505,690	+		IAI47_16555	0.17	-1.2
3,505,691	-		IAI47_16555	0.17	-1.6
3,505,691	-		IAI47_16555	0.17	-0.5
3,505,739	+		IAI47_16555	0.18	+0.2
3,505,740	-		IAI47_16555	0.18	-0.1
3,505,801	+		IAI47_16555	0.20	-0.7
3,505,823	+		IAI47_16555	0.21	-0.9
3,505,823	+		IAI47_16555	0.21	-0.0
3,505,823	+		IAI47_16555	0.21	-0.9
3,505,823	+		IAI47_16555	0.21	-0.2
3,505,823	+		IAI47_16555	0.21	+0.2
3,505,823	+		IAI47_16555	0.21	-0.1
3,505,823	+		IAI47_16555	0.21	+0.5
3,505,823	+		IAI47_16555	0.21	+3.3
3,505,823	+		IAI47_16555	0.21	+0.2
3,505,824	-		IAI47_16555	0.21	+2.7
3,505,824	-		IAI47_16555	0.21	-0.1
3,505,824	-		IAI47_16555	0.21	+0.4
3,505,824	-		IAI47_16555	0.21	-0.3
3,505,824	-		IAI47_16555	0.21	-1.4
3,505,824	-		IAI47_16555	0.21	+0.4
3,505,849	+		IAI47_16555	0.21	-0.6
3,505,849	+		IAI47_16555	0.21	+0.3
3,505,849	+		IAI47_16555	0.21	-1.2
3,505,849	+		IAI47_16555	0.21	-2.0
3,505,849	+		IAI47_16555	0.21	-1.4
3,505,849	+		IAI47_16555	0.21	-1.1
3,505,850	-		IAI47_16555	0.21	-1.6
3,505,850	-		IAI47_16555	0.21	-0.2
3,505,850	-		IAI47_16555	0.21	+6.7
3,505,850	-		IAI47_16555	0.21	+1.2
3,505,853	+		IAI47_16555	0.21	-0.6
3,505,853	+		IAI47_16555	0.21	-0.8
3,505,853	+		IAI47_16555	0.21	-0.1
3,505,853	+		IAI47_16555	0.21	-0.8
3,505,853	+		IAI47_16555	0.21	-0.4
3,505,854	-		IAI47_16555	0.21	+2.8
3,505,854	-		IAI47_16555	0.21	-0.1
3,505,854	-		IAI47_16555	0.21	+2.0
3,505,854	-		IAI47_16555	0.21	-0.5
3,505,876	+		IAI47_16555	0.22	+1.1
3,505,876	+		IAI47_16555	0.22	-0.2
3,505,897	+		IAI47_16555	0.23	-2.5
3,505,897	+		IAI47_16555	0.23	+2.5
3,505,897	+		IAI47_16555	0.23	-0.2
3,505,897	+		IAI47_16555	0.23	+1.5
3,505,898	-		IAI47_16555	0.23	+0.5
3,505,898	-		IAI47_16555	0.23	-1.1
3,505,898	-		IAI47_16555	0.23	+0.5
3,505,910	-		IAI47_16555	0.23	-0.1
3,505,910	-		IAI47_16555	0.23	-1.0
3,506,048	-		IAI47_16555	0.27	-0.4
3,506,070	+		IAI47_16555	0.28	-1.8
3,506,070	+		IAI47_16555	0.28	-0.5
3,506,070	+		IAI47_16555	0.28	-0.0
3,506,070	+		IAI47_16555	0.28	-1.0
3,506,070	+		IAI47_16555	0.28	-2.2
3,506,070	+		IAI47_16555	0.28	+0.1
3,506,070	+		IAI47_16555	0.28	+0.5
3,506,070	+		IAI47_16555	0.28	-0.4
3,506,070	+		IAI47_16555	0.28	-0.9
3,506,071	-		IAI47_16555	0.28	-2.1
3,506,071	-		IAI47_16555	0.28	+1.8
3,506,071	-		IAI47_16555	0.28	+0.1
3,506,071	-		IAI47_16555	0.28	-1.3
3,506,071	-		IAI47_16555	0.28	+0.7
3,506,071	-		IAI47_16555	0.28	-1.3
3,506,071	-		IAI47_16555	0.28	-0.6
3,506,071	-		IAI47_16555	0.28	+1.5
3,506,071	-		IAI47_16555	0.28	+0.6
3,506,071	-		IAI47_16555	0.28	-0.1
3,506,071	-		IAI47_16555	0.28	-0.2
3,506,071	-		IAI47_16555	0.28	-1.2
3,506,071	-		IAI47_16555	0.28	+0.7
3,506,071	-		IAI47_16555	0.28	+0.6
3,506,071	-		IAI47_16555	0.28	+0.5
3,506,075	-		IAI47_16555	0.28	+0.9
3,506,155	-		IAI47_16555	0.30	-0.2
3,506,155	-		IAI47_16555	0.30	+0.3
3,506,171	+		IAI47_16555	0.31	-0.1
3,506,172	-		IAI47_16555	0.31	+1.0
3,506,176	+		IAI47_16555	0.31	+1.5
3,506,176	+		IAI47_16555	0.31	-0.8
3,506,176	+		IAI47_16555	0.31	+0.5
3,506,176	+		IAI47_16555	0.31	-1.0
3,506,177	-		IAI47_16555	0.31	+1.1
3,506,192	-		IAI47_16555	0.31	+1.4
3,506,194	+		IAI47_16555	0.31	-2.5
3,506,194	+		IAI47_16555	0.31	-1.9
3,506,209	+		IAI47_16555	0.32	-0.9
3,506,248	+		IAI47_16555	0.33	-0.5
3,506,248	+		IAI47_16555	0.33	-2.1
3,506,248	+		IAI47_16555	0.33	-0.5
3,506,248	+		IAI47_16555	0.33	-0.1
3,506,249	-		IAI47_16555	0.33	-0.3
3,506,249	-		IAI47_16555	0.33	-0.9
3,506,269	+		IAI47_16555	0.33	-0.9
3,506,291	+		IAI47_16555	0.34	+1.4
3,506,292	-		IAI47_16555	0.34	+0.8
3,506,292	-		IAI47_16555	0.34	-0.1
3,506,292	-		IAI47_16555	0.34	+0.2
3,506,292	-		IAI47_16555	0.34	+0.1
3,506,393	+		IAI47_16555	0.37	+0.2
3,506,394	-		IAI47_16555	0.37	+2.1
3,506,394	-		IAI47_16555	0.37	-0.5
3,506,394	-		IAI47_16555	0.37	+0.2
3,506,399	-		IAI47_16555	0.37	-0.5
3,506,413	+		IAI47_16555	0.37	+0.3
3,506,413	+		IAI47_16555	0.37	-0.2
3,506,414	-		IAI47_16555	0.37	+0.1
3,506,414	-		IAI47_16555	0.37	+0.4
3,506,460	+		IAI47_16555	0.39	-1.1
3,506,461	-		IAI47_16555	0.39	+1.1
3,506,461	-		IAI47_16555	0.39	-0.6
3,506,477	-		IAI47_16555	0.39	+0.1
3,506,477	-		IAI47_16555	0.39	+1.7
3,506,492	-		IAI47_16555	0.40	-0.9
3,506,492	-		IAI47_16555	0.40	-1.0
3,506,503	+		IAI47_16555	0.40	+0.8
3,506,503	+		IAI47_16555	0.40	-0.5
3,506,557	+		IAI47_16555	0.42	-0.6
3,506,558	-		IAI47_16555	0.42	+0.6
3,506,558	-		IAI47_16555	0.42	-1.6
3,506,558	-		IAI47_16555	0.42	+0.6
3,506,584	+		IAI47_16555	0.42	+2.5
3,506,584	+		IAI47_16555	0.42	-0.6
3,506,584	+		IAI47_16555	0.42	-0.4
3,506,584	+		IAI47_16555	0.42	-0.6
3,506,584	+				+2.5
3,506,585	-		IAI47_16555	0.42	+0.6
3,506,594	+		IAI47_16555	0.43	-0.1
3,506,595	-		IAI47_16555	0.43	-0.8
3,506,616	+		IAI47_16555	0.43	+0.1
3,506,616	+		IAI47_16555	0.43	-1.9
3,506,616	+		IAI47_16555	0.43	-1.1
3,506,617	-		IAI47_16555	0.43	+1.5
3,506,617	-		IAI47_16555	0.43	-0.1
3,506,617	-		IAI47_16555	0.43	+0.5
3,506,617	-		IAI47_16555	0.43	-2.0
3,506,617	-		IAI47_16555	0.43	+0.6
3,506,642	+		IAI47_16555	0.44	+0.5
3,506,643	-		IAI47_16555	0.44	-0.1
3,506,695	+		IAI47_16555	0.45	-0.3
3,506,695	+		IAI47_16555	0.45	+0.4
3,506,696	-		IAI47_16555	0.45	-1.9
3,506,696	-		IAI47_16555	0.45	+0.9
3,506,701	-		IAI47_16555	0.46	-1.5
3,506,701	-		IAI47_16555	0.46	-2.1
3,506,701	-		IAI47_16555	0.46	-0.6
3,506,701	-		IAI47_16555	0.46	-1.4
3,506,701	-		IAI47_16555	0.46	+0.7
3,506,701	-		IAI47_16555	0.46	+1.0
3,506,701	-		IAI47_16555	0.46	-0.1
3,506,706	+		IAI47_16555	0.46	-1.0
3,506,706	+		IAI47_16555	0.46	+0.2
3,506,706	+		IAI47_16555	0.46	-0.6
3,506,706	+		IAI47_16555	0.46	-0.6
3,506,741	-		IAI47_16555	0.47	+0.1
3,506,741	-		IAI47_16555	0.47	-0.5
3,506,741	-		IAI47_16555	0.47	+1.7
3,506,741	-		IAI47_16555	0.47	-0.9
3,506,741	-		IAI47_16555	0.47	+1.8
3,506,797	+		IAI47_16555	0.48	-1.5
3,506,798	-		IAI47_16555	0.48	-0.5
3,506,805	+		IAI47_16555	0.49	-0.1
3,506,806	-		IAI47_16555	0.49	+0.6
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