Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS13245 and HSERO_RS13250 overlap by 4 nucleotides HSERO_RS13250 and HSERO_RS13255 overlap by 4 nucleotides HSERO_RS13255 and HSERO_RS13260 overlap by 1 nucleotides HSERO_RS13260 and HSERO_RS13265 are separated by 26 nucleotides
HSERO_RS13245: HSERO_RS13245 - adenosylcobinamide kinase, at 3,019,095 to 3,019,709
_RS13245
HSERO_RS13250: HSERO_RS13250 - oxygen-insensitive nitroreductase, at 3,019,706 to 3,020,368
_RS13250
HSERO_RS13255: HSERO_RS13255 - cobyrinic acid a,c-diamide synthase, at 3,020,365 to 3,021,699
_RS13255
HSERO_RS13260: HSERO_RS13260 - cobinamide adenolsyltransferase, at 3,021,699 to 3,022,301
_RS13260
HSERO_RS13265: HSERO_RS13265 - G3E family GTPase, at 3,022,328 to 3,023,461
_RS13265
Position (kb) 3020
3021
3022 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 3019.955 kb on + strand, within HSERO_RS13250 at 3020.080 kb on - strand, within HSERO_RS13250 at 3020.118 kb on - strand, within HSERO_RS13250 at 3020.143 kb on + strand, within HSERO_RS13250 at 3020.483 kb on - strand at 3020.511 kb on + strand, within HSERO_RS13255 at 3020.552 kb on - strand, within HSERO_RS13255 at 3020.949 kb on - strand, within HSERO_RS13255 at 3021.125 kb on + strand, within HSERO_RS13255 at 3021.574 kb on - strand at 3021.574 kb on - strand at 3021.574 kb on - strand at 3021.863 kb on + strand, within HSERO_RS13260 at 3021.947 kb on - strand, within HSERO_RS13260 at 3022.017 kb on + strand, within HSERO_RS13260 at 3022.129 kb on - strand, within HSERO_RS13260 at 3022.331 kb on + strand at 3022.590 kb on + strand, within HSERO_RS13265 at 3022.608 kb on - strand, within HSERO_RS13265
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 3,019,955 + HSERO_RS13250 0.38 -2.3 3,020,080 - HSERO_RS13250 0.56 -0.3 3,020,118 - HSERO_RS13250 0.62 -0.4 3,020,143 + HSERO_RS13250 0.66 -0.8 3,020,483 - -4.1 3,020,511 + HSERO_RS13255 0.11 -3.1 3,020,552 - HSERO_RS13255 0.14 -3.4 3,020,949 - HSERO_RS13255 0.44 -1.6 3,021,125 + HSERO_RS13255 0.57 -1.6 3,021,574 - -3.0 3,021,574 - -2.8 3,021,574 - -0.9 3,021,863 + HSERO_RS13260 0.27 -3.5 3,021,947 - HSERO_RS13260 0.41 -4.7 3,022,017 + HSERO_RS13260 0.53 -3.0 3,022,129 - HSERO_RS13260 0.71 -2.3 3,022,331 + -0.4 3,022,590 + HSERO_RS13265 0.23 +1.7 3,022,608 - HSERO_RS13265 0.25 -0.9
Or see this region's nucleotide sequence