Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02954

Experiment: PYE 25C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 25C survival rep2 28 days
3,112,562	+		CCNA_02953	0.34	+0.1
3,112,570	-		CCNA_02953	0.35	-0.1
3,112,570	-		CCNA_02953	0.35	-2.0
3,112,588	+		CCNA_02953	0.36	-0.3
3,112,595	+		CCNA_02953	0.37	+2.7
3,112,684	+		CCNA_02953	0.46	-1.2
3,112,751	+		CCNA_02953	0.53	-1.5
3,112,817	+		CCNA_02953	0.60	+1.1
3,112,869	+		CCNA_02953	0.65	+1.0
3,112,870	+		CCNA_02953	0.66	-0.1
3,112,870	+		CCNA_02953	0.66	-1.5
3,112,870	+		CCNA_02953	0.66	-2.3
3,112,904	+		CCNA_02953	0.69	+0.4
3,112,923	-		CCNA_02953	0.71	+0.4
3,112,923	-		CCNA_02953	0.71	+2.7
3,113,015	+		CCNA_02953	0.80	+0.5
3,113,019	+		CCNA_02953	0.81	+0.4
3,113,088	+		CCNA_02953	0.88	+1.1
3,113,088	+		CCNA_02953	0.88	+0.6
3,113,088	-		CCNA_02953	0.88	-0.3
3,113,090	+		CCNA_02953	0.88	+2.0
3,113,105	+		CCNA_02953	0.90	+1.6
3,113,136	+				-0.4
3,113,163	+				+3.1
3,113,171	-				-1.6
3,113,197	+				-0.6
3,113,197	+				-1.2
3,113,197	+				-0.1
3,113,197	+				-4.1
3,113,197	+				-2.5
3,113,197	+				+1.6
3,113,205	-				+0.0
3,113,205	-				+0.7
3,113,205	-				-1.6
3,113,205	-				+1.1
3,113,205	-				-1.4
3,113,205	-				-2.1
3,113,205	-				-0.7
3,113,220	+				-0.6
3,113,244	-				-1.0
3,113,273	+				+1.4
3,113,292	+				-0.9
3,113,300	+				-0.4
3,113,300	+				-0.6
3,113,306	-				+0.5
3,113,317	+				+0.2
3,113,317	+				+1.1
3,113,317	+				+1.5
3,113,325	-				-0.7
3,113,327	-				-1.4
3,113,330	-				+1.7
3,113,335	+				-1.4
3,113,390	+				+0.9
3,113,390	+				+0.3
3,113,391	+				-0.2
3,113,391	+				-1.4
3,113,391	+				+0.9
3,113,399	+				-0.3
3,113,407	+				-1.7
3,113,428	+				-0.6
3,113,451	+				+0.8
3,113,451	+				-2.8
3,113,451	+				-0.6
3,113,459	-				+0.6
3,113,459	-				+2.4
3,113,465	-				+3.0
3,113,501	-				-0.3
3,113,534	-				-1.3
3,113,534	-				+0.3
3,113,583	-				-0.1
3,113,649	+		CCNA_02954	0.12	-2.6
3,113,659	-		CCNA_02954	0.13	-1.4
3,113,659	-		CCNA_02954	0.13	-1.4
3,113,675	+		CCNA_02954	0.15	+0.4
3,113,675	+		CCNA_02954	0.15	-1.9
3,113,696	+		CCNA_02954	0.17	+1.0
3,113,706	-		CCNA_02954	0.19	-1.0
3,113,714	-		CCNA_02954	0.20	+0.5
3,113,754	+		CCNA_02954	0.24	+1.7
3,113,759	+		CCNA_02954	0.25	-1.8
3,113,834	+		CCNA_02954	0.34	+0.1
3,113,872	+		CCNA_02954	0.38	-1.4
3,113,878	+		CCNA_02954	0.39	-2.2
3,113,891	+		CCNA_02954	0.40	+0.1
3,113,891	+		CCNA_02954	0.40	-1.4
3,113,891	+		CCNA_02954	0.40	+2.7
3,113,909	-		CCNA_02954	0.42	-0.9
3,113,924	-		CCNA_02954	0.44	+0.8
3,113,952	-		CCNA_02954	0.48	-1.3
3,114,009	+		CCNA_02954	0.54	-1.2
3,114,014	+		CCNA_02954	0.55	-2.1
3,114,014	+		CCNA_02954	0.55	-0.9
3,114,028	+		CCNA_02954	0.56	+1.5
3,114,120	+		CCNA_02954	0.67	-2.4
3,114,153	-		CCNA_02954	0.71	-2.8
3,114,205	+		CCNA_02954	0.77	-1.2
3,114,213	-		CCNA_02954	0.78	+1.1
3,114,213	-		CCNA_02954	0.78	-0.3
3,114,278	-		CCNA_02954	0.86	+2.7
3,114,279	-		CCNA_02954	0.86	+3.1
3,114,305	+		CCNA_02954	0.89	-0.0
3,114,309	-		CCNA_02954	0.89	-0.9
3,114,313	-				-0.1
3,114,337	+				-0.8
3,114,368	+				+1.5
3,114,390	-				+1.1
3,114,392	+				-0.2
3,114,395	-				+1.1
3,114,401	-				-2.2
3,114,507	+		CCNA_02955	0.14	-0.1
3,114,571	+		CCNA_02955	0.22	+1.1
3,114,616	-		CCNA_02955	0.28	+0.6
3,114,631	-		CCNA_02955	0.30	+2.7
3,114,665	-		CCNA_02955	0.34	+0.1
3,114,683	-		CCNA_02955	0.37	-1.5
3,114,767	+		CCNA_02955	0.47	-2.6
3,114,767	+		CCNA_02955	0.47	-2.4
3,114,775	-		CCNA_02955	0.48	+0.6
3,114,775	-		CCNA_02955	0.48	+1.1
3,114,775	-		CCNA_02955	0.48	+1.7
3,114,775	-		CCNA_02955	0.48	+1.6
3,114,847	+		CCNA_02955	0.58	-1.4
3,114,847	+		CCNA_02955	0.58	-0.1
3,114,855	-		CCNA_02955	0.59	+1.6
3,114,857	+		CCNA_02955	0.59	-2.3
3,114,857	+		CCNA_02955	0.59	-1.2
3,114,888	+		CCNA_02955	0.63	+0.4
3,114,895	-		CCNA_02955	0.64	-3.7
3,114,933	-		CCNA_02955	0.69	-2.1
3,114,940	+		CCNA_02955	0.70	+2.7
3,114,940	+		CCNA_02955	0.70	+1.2
3,114,964	-		CCNA_02955	0.73	-0.6
3,114,964	-		CCNA_02955	0.73	+1.7
3,114,965	+		CCNA_02955	0.73	-0.8
3,114,971	+		CCNA_02955	0.74	-1.4
3,114,971	+		CCNA_02955	0.74	-2.5
3,114,971	+		CCNA_02955	0.74	+1.8
3,114,971	+		CCNA_02955	0.74	-0.5
3,114,971	+		CCNA_02955	0.74	+1.1
3,114,971	+		CCNA_02955	0.74	-0.6
3,114,971	+		CCNA_02955	0.74	-1.1
3,114,971	+		CCNA_02955	0.74	+0.7
3,114,971	+		CCNA_02955	0.74	+0.1
3,114,971	+		CCNA_02955	0.74	-0.2
3,114,971	+		CCNA_02955	0.74	+0.9
3,114,979	-		CCNA_02955	0.75	+1.4
3,114,979	-		CCNA_02955	0.75	-0.6
3,114,979	-		CCNA_02955	0.75	-0.5
3,114,979	-		CCNA_02955	0.75	+1.7
3,114,979	-		CCNA_02955	0.75	-0.9
3,114,979	-		CCNA_02955	0.75	+1.4
3,114,979	-		CCNA_02955	0.75	-0.6
3,114,979	-		CCNA_02955	0.75	-1.3
3,114,979	-		CCNA_02955	0.75	+1.1
3,114,979	-		CCNA_02955	0.75	-1.4
3,114,979	-		CCNA_02955	0.75	+1.3
3,114,979	-		CCNA_02955	0.75	-1.8
3,114,979	-		CCNA_02955	0.75	+0.5
3,114,979	-		CCNA_02955	0.75	-1.5
3,114,979	-		CCNA_02955	0.75	-0.1
3,114,979	-		CCNA_02955	0.75	-0.5
3,114,979	-		CCNA_02955	0.75	+1.3
3,114,979	-		CCNA_02955	0.75	-0.3
3,114,979	-		CCNA_02955	0.75	+3.0
3,114,979	-		CCNA_02955	0.75	-0.6
3,115,070	-		CCNA_02955	0.87	+0.8
3,115,072	-		CCNA_02955	0.87	+2.0
3,115,113	-				-1.7
3,115,120	-				+1.3
3,115,123	-				-0.5
3,115,123	-				+0.8
3,115,149	-				+1.4
3,115,153	+				+1.4
3,115,205	+				-2.0
3,115,217	+				+0.4
3,115,218	-				+1.1
3,115,264	-		CCNA_02956	0.16	+0.4
3,115,264	-		CCNA_02956	0.16	-1.1
3,115,264	-		CCNA_02956	0.16	+0.1
3,115,264	-		CCNA_02956	0.16	+0.6
3,115,264	-		CCNA_02956	0.16	+0.1
3,115,264	-		CCNA_02956	0.16	-1.7
3,115,295	-		CCNA_02956	0.22	+0.7
3,115,313	+		CCNA_02956	0.25	+2.7
3,115,326	-		CCNA_02956	0.28	-1.1
3,115,326	-		CCNA_02956	0.28	+0.7
3,115,331	-		CCNA_02956	0.28	+2.1
3,115,331	-		CCNA_02956	0.28	-1.5
3,115,347	+		CCNA_02956	0.31	-1.5
3,115,360	-		CCNA_02956	0.34	+1.2
3,115,383	+		CCNA_02956	0.38	-0.1