Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02206

Experiment: PYE 25C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 25C survival rep2 28 days
2,353,287	+				-2.2
2,353,287	+				-1.6
2,353,309	+				-0.3
2,353,317	-				-0.2
2,353,349	-		CCNA_02205	0.12	+2.0
2,353,349	-		CCNA_02205	0.12	-1.2
2,353,364	+		CCNA_02205	0.14	-1.9
2,353,382	-		CCNA_02205	0.16	+1.0
2,353,382	-		CCNA_02205	0.16	-0.2
2,353,442	+		CCNA_02205	0.22	+0.9
2,353,460	-		CCNA_02205	0.24	+0.5
2,353,462	+		CCNA_02205	0.24	-1.6
2,353,470	-		CCNA_02205	0.25	-3.8
2,353,470	-		CCNA_02205	0.25	-1.2
2,353,470	-		CCNA_02205	0.25	-1.6
2,353,487	-		CCNA_02205	0.27	-1.0
2,353,515	-		CCNA_02205	0.30	+0.1
2,353,534	+		CCNA_02205	0.32	+2.5
2,353,534	+		CCNA_02205	0.32	-2.1
2,353,539	+		CCNA_02205	0.32	-0.3
2,353,542	-		CCNA_02205	0.32	+0.2
2,353,542	-		CCNA_02205	0.32	+0.6
2,353,547	-		CCNA_02205	0.33	+1.0
2,353,548	-		CCNA_02205	0.33	-1.9
2,353,589	-		CCNA_02205	0.37	+3.5
2,353,631	+		CCNA_02205	0.42	-2.6
2,353,639	-		CCNA_02205	0.43	+0.5
2,353,728	-		CCNA_02205	0.52	-1.1
2,353,754	+		CCNA_02205	0.55	-0.1
2,353,754	+		CCNA_02205	0.55	-3.5
2,353,756	-		CCNA_02205	0.55	-1.6
2,353,760	+		CCNA_02205	0.55	-1.4
2,353,762	-				+0.9
2,353,768	-		CCNA_02205	0.56	+2.5
2,353,768	-		CCNA_02205	0.56	+0.2
2,353,774	-		CCNA_02205	0.57	+2.5
2,353,786	-		CCNA_02205	0.58	-2.5
2,353,786	-		CCNA_02205	0.58	-0.4
2,353,801	+		CCNA_02205	0.60	-3.8
2,353,809	-		CCNA_02205	0.60	-3.2
2,353,878	+		CCNA_02205	0.68	+1.2
2,353,879	+		CCNA_02205	0.68	-1.0
2,353,910	-		CCNA_02205	0.71	-0.5
2,353,927	-		CCNA_02205	0.73	-1.5
2,353,946	-		CCNA_02205	0.75	+1.2
2,353,946	-		CCNA_02205	0.75	-0.3
2,353,967	-		CCNA_02205	0.77	-0.9
2,353,969	+		CCNA_02205	0.77	-2.3
2,353,969	+		CCNA_02205	0.77	-1.7
2,353,977	-		CCNA_02205	0.78	-1.7
2,353,977	-		CCNA_02205	0.78	-2.7
2,354,019	-		CCNA_02205	0.82	-3.5
2,354,077	-		CCNA_02205	0.88	-2.6
2,354,079	+		CCNA_02205	0.89	+0.3
2,354,128	+				-2.4
2,354,203	+				-0.1
2,354,216	+				+0.5
2,354,224	-				-4.2
2,354,224	-				+0.2
2,354,224	-				-0.0
2,354,224	-				-0.9
2,354,228	-				+0.4
2,354,238	-				-2.6
2,354,284	+				+0.4
2,354,285	-				-3.7
2,354,294	+				-1.5
2,354,294	+				+1.6
2,354,294	+				-0.8
2,354,302	-				+0.5
2,354,302	-				-2.9
2,354,302	-				+0.1
2,354,302	-				-1.4
2,354,352	+		CCNA_02206	0.13	-1.6
2,354,359	-		CCNA_02206	0.14	+1.7
2,354,360	-		CCNA_02206	0.14	-1.8
2,354,376	+		CCNA_02206	0.17	-0.3
2,354,451	+		CCNA_02206	0.30	-1.6
2,354,451	+		CCNA_02206	0.30	+0.7
2,354,461	+		CCNA_02206	0.32	+2.3
2,354,488	-		CCNA_02206	0.37	-1.2
2,354,491	+		CCNA_02206	0.37	-2.3
2,354,508	+		CCNA_02206	0.40	+0.5
2,354,508	+		CCNA_02206	0.40	-3.1
2,354,508	+		CCNA_02206	0.40	-2.4
2,354,508	+		CCNA_02206	0.40	-2.0
2,354,508	+		CCNA_02206	0.40	+0.1
2,354,516	-		CCNA_02206	0.42	+2.5
2,354,516	-		CCNA_02206	0.42	-0.6
2,354,516	-		CCNA_02206	0.42	-2.5
2,354,516	-		CCNA_02206	0.42	-3.1
2,354,516	-		CCNA_02206	0.42	+1.5
2,354,516	-		CCNA_02206	0.42	-2.1
2,354,521	+		CCNA_02206	0.43	+0.5
2,354,639	+		CCNA_02206	0.64	-0.2
2,354,641	-		CCNA_02206	0.64	-0.9
2,354,664	+		CCNA_02206	0.68	+2.5
2,354,700	+		CCNA_02206	0.74	-1.1
2,354,721	+		CCNA_02206	0.78	+0.0
2,354,724	-		CCNA_02206	0.79	+2.0
2,354,729	-		CCNA_02206	0.80	+0.2
2,354,734	-		CCNA_02206	0.80	-0.5
2,354,768	+		CCNA_02206	0.87	+1.6
2,354,773	+		CCNA_02206	0.87	+0.5
2,354,773	+		CCNA_02206	0.87	+0.8
2,354,773	+		CCNA_02206	0.87	+1.6
2,354,776	-		CCNA_02206	0.88	+0.6
2,354,776	-		CCNA_02206	0.88	-2.3
2,354,781	-		CCNA_02206	0.89	+1.0
2,354,781	-		CCNA_02206	0.89	+0.4
2,354,786	-		CCNA_02206	0.90	+0.7
2,354,792	-				+1.3
2,354,794	+				+0.2
2,354,805	+				-0.3
2,354,805	+				+1.0
2,354,813	-				+0.2
2,354,823	-				-1.9
2,354,842	+				-2.1
2,354,944	+				+1.9
2,354,944	+				-0.8
2,354,944	+				+1.5
2,354,944	+				-3.9
2,354,947	-				+1.7
2,354,952	-				-0.9
2,354,989	+				-0.3
2,354,996	-				-2.3
2,354,996	-				-2.9
2,354,997	-				-1.4
2,355,000	+				+1.9
2,355,000	+				-1.1
2,355,000	+				+1.4
2,355,008	-				+2.5
2,355,008	-				-1.6
2,355,018	-		CCNA_02207	0.10	-2.5
2,355,018	-		CCNA_02207	0.10	-0.8
2,355,025	+		CCNA_02207	0.11	+1.2
2,355,025	+		CCNA_02207	0.11	-2.4
2,355,033	-		CCNA_02207	0.12	-0.1
2,355,033	-		CCNA_02207	0.12	+2.5
2,355,059	-		CCNA_02207	0.15	-1.6
2,355,063	+		CCNA_02207	0.15	-0.1
2,355,064	-		CCNA_02207	0.15	-2.4
2,355,066	-		CCNA_02207	0.15	-0.5
2,355,139	+		CCNA_02207	0.23	+0.3
2,355,149	-		CCNA_02207	0.24	-1.6
2,355,154	-		CCNA_02207	0.25	-1.6
2,355,159	+		CCNA_02207	0.25	+0.4
2,355,170	+		CCNA_02207	0.26	-0.0
2,355,170	+		CCNA_02207	0.26	+1.4
2,355,176	+		CCNA_02207	0.27	+0.3
2,355,196	+		CCNA_02207	0.29	+0.2
2,355,196	+		CCNA_02207	0.29	+0.2
2,355,196	+		CCNA_02207	0.29	+0.4
2,355,196	+		CCNA_02207	0.29	-2.4
2,355,196	+		CCNA_02207	0.29	+1.5
2,355,196	+		CCNA_02207	0.29	+0.4
2,355,196	+		CCNA_02207	0.29	-1.6
2,355,196	+		CCNA_02207	0.29	+1.2
2,355,196	+		CCNA_02207	0.29	+0.3
2,355,196	+		CCNA_02207	0.29	+0.1
2,355,196	+		CCNA_02207	0.29	-1.5
2,355,196	+		CCNA_02207	0.29	+0.5
2,355,196	+		CCNA_02207	0.29	-0.9
2,355,196	+		CCNA_02207	0.29	-0.2
2,355,196	+		CCNA_02207	0.29	+0.6
2,355,196	+		CCNA_02207	0.29	-1.3
2,355,196	+		CCNA_02207	0.29	-1.1
2,355,196	+		CCNA_02207	0.29	-3.3
2,355,196	+		CCNA_02207	0.29	+0.5
2,355,196	+		CCNA_02207	0.29	+0.5
2,355,196	+		CCNA_02207	0.29	+0.4
2,355,196	+		CCNA_02207	0.29	-0.0
2,355,196	+		CCNA_02207	0.29	-1.6
2,355,196	+		CCNA_02207	0.29	+0.4
2,355,196	+		CCNA_02207	0.29	-0.8
2,355,196	+		CCNA_02207	0.29	+0.7
2,355,204	-		CCNA_02207	0.30	-3.4
2,355,204	-		CCNA_02207	0.30	+3.3
2,355,204	-		CCNA_02207	0.30	+2.5
2,355,204	-		CCNA_02207	0.30	-1.7
2,355,204	-		CCNA_02207	0.30	-1.4
2,355,204	-		CCNA_02207	0.30	-0.5
2,355,204	-		CCNA_02207	0.30	-0.8
2,355,204	-		CCNA_02207	0.30	-1.5
2,355,204	-		CCNA_02207	0.30	-3.2
2,355,204	-		CCNA_02207	0.30	-0.8
2,355,204	-		CCNA_02207	0.30	-0.6
2,355,204	-		CCNA_02207	0.30	-1.6
2,355,204	-		CCNA_02207	0.30	-1.4
2,355,204	-		CCNA_02207	0.30	-0.3
2,355,204	-		CCNA_02207	0.30	+1.5
2,355,204	-		CCNA_02207	0.30	-3.6
2,355,204	-		CCNA_02207	0.30	-1.9
2,355,204	-		CCNA_02207	0.30	-0.8
2,355,204	-		CCNA_02207	0.30	-1.0
2,355,204	-		CCNA_02207	0.30	-2.8
2,355,217	-		CCNA_02207	0.31	-2.1
2,355,271	+		CCNA_02207	0.37	+0.2
2,355,276	+		CCNA_02207	0.37	+1.2
2,355,276	+		CCNA_02207	0.37	-0.2
2,355,276	+		CCNA_02207	0.37	+0.6
2,355,276	+		CCNA_02207	0.37	+0.8
2,355,279	-		CCNA_02207	0.38	-0.4
2,355,284	-		CCNA_02207	0.38	-0.8
2,355,284	-		CCNA_02207	0.38	-2.3
2,355,310	+		CCNA_02207	0.41	-1.8
2,355,310	+		CCNA_02207	0.41	+0.9
2,355,318	-		CCNA_02207	0.42	-1.2
2,355,318	-		CCNA_02207	0.42	-0.8
2,355,318	-		CCNA_02207	0.42	+0.2
2,355,318	-		CCNA_02207	0.42	-0.7
2,355,318	-		CCNA_02207	0.42	-1.4
2,355,318	-		CCNA_02207	0.42	+0.6
2,355,364	+		CCNA_02207	0.47	-0.0
2,355,393	+		CCNA_02207	0.50	-1.4
2,355,425	-		CCNA_02207	0.53	-0.5
2,355,428	+		CCNA_02207	0.53	+0.6
2,355,446	-		CCNA_02207	0.55	-0.3
2,355,468	-		CCNA_02207	0.58	-1.3
2,355,483	+		CCNA_02207	0.59	+0.0
2,355,485	+		CCNA_02207	0.59	+1.5
2,355,557	+		CCNA_02207	0.67	+0.8
2,355,584	+		CCNA_02207	0.70	-2.1
2,355,584	+		CCNA_02207	0.70	-2.3
2,355,603	-		CCNA_02207	0.72	-1.1
2,355,639	+		CCNA_02207	0.76	+0.8
2,355,647	-		CCNA_02207	0.76	-2.9
2,355,648	-		CCNA_02207	0.77	-2.6
2,355,673	+		CCNA_02207	0.79	+0.7
2,355,676	+		CCNA_02207	0.79	-3.2
2,355,722	-		CCNA_02207	0.84	-0.6
2,355,722	-		CCNA_02207	0.84	+0.9
2,355,736	+		CCNA_02207	0.86	-0.6
2,355,751	+		CCNA_02207	0.87	+0.1
2,355,776	-				-1.2
2,355,798	+				-0.1
2,355,800	+				+0.5
2,355,806	-				-1.9
2,355,808	-				-2.1
2,355,838	+				+0.7
2,355,838	+				+0.6
2,355,838	+				+0.8
2,355,838	+				-0.4
2,355,840	+				+2.4
2,355,840	+				-1.2