Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02036 and SMc02037 are separated by 241 nucleotides SMc02037 and SMc02038 are separated by 35 nucleotides
SMc02036: SMc02036 - transcriptional regulator, at 2,742,563 to 2,743,270
SMc02036
SMc02037: SMc02037 - oxidoreductase, at 2,743,512 to 2,744,282
SMc02037
SMc02038: SMc02038 - glycerol dehydrogenase, at 2,744,318 to 2,745,412
SMc02038
Position (kb)
2743
2744
2745 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2743.004 kb on + strand, within SMc02036 at 2743.020 kb on - strand, within SMc02036 at 2743.192 kb on + strand, within SMc02036 at 2743.194 kb on - strand, within SMc02036 at 2743.516 kb on - strand at 2743.698 kb on + strand, within SMc02037 at 2743.699 kb on - strand, within SMc02037 at 2743.699 kb on - strand, within SMc02037 at 2743.898 kb on + strand, within SMc02037 at 2743.959 kb on + strand, within SMc02037 at 2743.959 kb on + strand, within SMc02037 at 2743.960 kb on - strand, within SMc02037 at 2743.992 kb on + strand, within SMc02037 at 2743.993 kb on - strand, within SMc02037 at 2744.088 kb on + strand, within SMc02037 at 2744.232 kb on + strand at 2744.233 kb on - strand at 2744.233 kb on - strand at 2744.233 kb on - strand at 2744.233 kb on - strand at 2744.233 kb on - strand at 2744.234 kb on + strand at 2744.234 kb on + strand at 2744.268 kb on + strand at 2744.269 kb on - strand at 2744.269 kb on - strand at 2744.269 kb on - strand at 2744.269 kb on - strand at 2744.269 kb on - strand at 2744.348 kb on + strand at 2744.348 kb on + strand at 2744.348 kb on + strand at 2744.348 kb on + strand at 2744.348 kb on + strand at 2744.349 kb on - strand at 2744.349 kb on - strand at 2744.349 kb on - strand at 2744.349 kb on - strand at 2744.387 kb on + strand at 2744.572 kb on + strand, within SMc02038 at 2744.861 kb on - strand, within SMc02038 at 2744.882 kb on + strand, within SMc02038 at 2744.882 kb on + strand, within SMc02038 at 2744.882 kb on + strand, within SMc02038 at 2744.883 kb on - strand, within SMc02038 at 2744.883 kb on - strand, within SMc02038 at 2744.883 kb on - strand, within SMc02038 at 2745.125 kb on + strand, within SMc02038 at 2745.211 kb on - strand, within SMc02038 at 2745.211 kb on - strand, within SMc02038 at 2745.211 kb on - strand, within SMc02038
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 2,743,004 + SMc02036 0.62 -3.2 2,743,020 - SMc02036 0.65 +0.4 2,743,192 + SMc02036 0.89 +0.1 2,743,194 - SMc02036 0.89 +0.9 2,743,516 - -0.2 2,743,698 + SMc02037 0.24 -0.7 2,743,699 - SMc02037 0.24 -0.8 2,743,699 - SMc02037 0.24 -0.4 2,743,898 + SMc02037 0.50 +0.4 2,743,959 + SMc02037 0.58 -0.7 2,743,959 + SMc02037 0.58 -0.4 2,743,960 - SMc02037 0.58 -0.4 2,743,992 + SMc02037 0.62 -1.0 2,743,993 - SMc02037 0.62 -1.2 2,744,088 + SMc02037 0.75 -1.9 2,744,232 + -0.7 2,744,233 - -0.3 2,744,233 - -0.3 2,744,233 - +1.3 2,744,233 - -1.5 2,744,233 - +0.3 2,744,234 + -0.2 2,744,234 + -2.0 2,744,268 + -2.6 2,744,269 - +0.7 2,744,269 - +0.9 2,744,269 - -0.3 2,744,269 - -0.1 2,744,269 - +1.8 2,744,348 + +0.3 2,744,348 + -0.0 2,744,348 + -3.3 2,744,348 + -3.2 2,744,348 + -1.2 2,744,349 - -0.7 2,744,349 - -0.1 2,744,349 - +0.5 2,744,349 - -0.1 2,744,387 + -2.8 2,744,572 + SMc02038 0.23 +1.3 2,744,861 - SMc02038 0.50 -0.8 2,744,882 + SMc02038 0.52 -0.4 2,744,882 + SMc02038 0.52 -0.9 2,744,882 + SMc02038 0.52 +0.6 2,744,883 - SMc02038 0.52 -0.6 2,744,883 - SMc02038 0.52 -0.6 2,744,883 - SMc02038 0.52 +0.1 2,745,125 + SMc02038 0.74 -0.3 2,745,211 - SMc02038 0.82 -0.0 2,745,211 - SMc02038 0.82 +2.3 2,745,211 - SMc02038 0.82 +0.0
Or see this region's nucleotide sequence