Strain Fitness in Sinorhizobium meliloti 1021 around SMc00861

Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc00863 and SMc00862 are separated by 7 nucleotidesSMc00862 and SMc00861 are separated by 7 nucleotidesSMc00861 and SMc00860 are separated by 262 nucleotides SMc00863: SMc00863 - molybdenum cofactor biosynthesis protein B, at 923,950 to 924,492 SMc00863 SMc00862: SMc00862 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, at 924,500 to 925,405 SMc00862 SMc00861: SMc00861 - signal peptide protein, at 925,413 to 927,242 SMc00861 SMc00860: SMc00860 - octaprenyl-diphosphate synthase, at 927,505 to 928,521 SMc00860 Position (kb) 925 926 927 928Strain fitness (log2 ratio) -1 0 1at 927.267 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
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927,267 - +1.0

Or see this region's nucleotide sequence