Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0522 and SMa0523 overlap by 20 nucleotides SMa0523 and SMa0525 overlap by 4 nucleotides SMa0525 and SMa0526 overlap by 4 nucleotides
SMa0522: SMa0522 - ABC transporter substrate-binding protein, at 281,664 to 282,392
SMa0522
SMa0523: SMa0523 - ABC transporter substrate-binding protein, at 282,373 to 282,777
SMa0523
SMa0525: SMa0525 - ABC transporter permease, at 282,774 to 284,579
SMa0525
SMa0526: SMa0526 - maltose/trehalose ABC transporter, at 284,576 to 285,622
SMa0526
Position (kb) 282
283
284
285 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 281.793 kb on + strand, within SMa0522 at 281.794 kb on - strand, within SMa0522 at 281.794 kb on - strand, within SMa0522 at 281.844 kb on + strand, within SMa0522 at 281.873 kb on + strand, within SMa0522 at 281.873 kb on + strand, within SMa0522 at 281.874 kb on - strand, within SMa0522 at 281.946 kb on + strand, within SMa0522 at 282.006 kb on + strand, within SMa0522 at 282.006 kb on + strand, within SMa0522 at 282.006 kb on + strand, within SMa0522 at 282.006 kb on + strand, within SMa0522 at 282.007 kb on - strand, within SMa0522 at 282.007 kb on - strand, within SMa0522 at 282.007 kb on - strand, within SMa0522 at 282.093 kb on + strand, within SMa0522 at 282.093 kb on + strand, within SMa0522 at 282.093 kb on + strand, within SMa0522 at 282.093 kb on + strand, within SMa0522 at 282.093 kb on + strand, within SMa0522 at 282.093 kb on + strand, within SMa0522 at 282.093 kb on + strand, within SMa0522 at 282.095 kb on + strand, within SMa0522 at 282.095 kb on + strand, within SMa0522 at 282.251 kb on + strand, within SMa0522 at 282.258 kb on + strand, within SMa0522 at 282.259 kb on - strand, within SMa0522 at 282.269 kb on - strand, within SMa0522 at 282.328 kb on + strand at 282.328 kb on + strand at 282.328 kb on + strand at 282.328 kb on + strand at 282.328 kb on + strand at 282.329 kb on - strand at 282.329 kb on - strand at 282.329 kb on - strand at 282.390 kb on + strand at 282.390 kb on + strand at 282.430 kb on + strand, within SMa0523 at 282.479 kb on + strand, within SMa0523 at 282.510 kb on - strand, within SMa0523 at 282.510 kb on - strand, within SMa0523 at 282.532 kb on - strand, within SMa0523 at 282.571 kb on - strand, within SMa0523 at 282.628 kb on + strand, within SMa0523 at 282.628 kb on + strand, within SMa0523 at 282.628 kb on + strand, within SMa0523 at 282.629 kb on - strand, within SMa0523 at 282.629 kb on - strand, within SMa0523 at 282.839 kb on + strand at 282.840 kb on - strand at 282.840 kb on - strand at 282.840 kb on - strand at 282.943 kb on + strand at 283.046 kb on + strand, within SMa0525 at 283.047 kb on - strand, within SMa0525 at 283.049 kb on + strand, within SMa0525 at 283.049 kb on + strand, within SMa0525 at 283.050 kb on - strand, within SMa0525 at 283.050 kb on - strand, within SMa0525 at 283.050 kb on - strand, within SMa0525 at 283.050 kb on - strand, within SMa0525 at 283.273 kb on - strand, within SMa0525 at 283.332 kb on + strand, within SMa0525 at 283.332 kb on + strand, within SMa0525 at 283.336 kb on - strand, within SMa0525 at 283.336 kb on - strand, within SMa0525 at 283.350 kb on - strand, within SMa0525 at 283.443 kb on - strand, within SMa0525 at 283.448 kb on - strand, within SMa0525 at 283.576 kb on - strand, within SMa0525 at 283.611 kb on + strand, within SMa0525 at 283.612 kb on - strand, within SMa0525 at 283.786 kb on + strand, within SMa0525 at 283.827 kb on - strand, within SMa0525 at 284.121 kb on + strand, within SMa0525 at 284.122 kb on - strand, within SMa0525 at 284.167 kb on - strand, within SMa0525 at 284.205 kb on + strand, within SMa0525 at 284.205 kb on + strand, within SMa0525 at 284.254 kb on + strand, within SMa0525 at 284.347 kb on + strand, within SMa0525 at 284.440 kb on + strand at 284.449 kb on - strand at 284.455 kb on - strand at 284.580 kb on + strand at 284.581 kb on - strand at 284.581 kb on - strand at 284.615 kb on + strand at 284.616 kb on - strand at 284.635 kb on - strand at 284.704 kb on - strand, within SMa0526 at 284.715 kb on + strand, within SMa0526 at 284.837 kb on + strand, within SMa0526 at 284.837 kb on + strand, within SMa0526 at 284.837 kb on + strand, within SMa0526 at 284.838 kb on - strand, within SMa0526 at 284.838 kb on - strand, within SMa0526 at 284.855 kb on - strand, within SMa0526 at 285.152 kb on + strand, within SMa0526 at 285.152 kb on + strand, within SMa0526 at 285.153 kb on - strand, within SMa0526 at 285.190 kb on + strand, within SMa0526 at 285.321 kb on + strand, within SMa0526 at 285.333 kb on - strand, within SMa0526 at 285.446 kb on + strand, within SMa0526
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 281,793 + SMa0522 0.18 +0.5 281,794 - SMa0522 0.18 -0.1 281,794 - SMa0522 0.18 -1.7 281,844 + SMa0522 0.25 -0.8 281,873 + SMa0522 0.29 -0.9 281,873 + SMa0522 0.29 -0.6 281,874 - SMa0522 0.29 -0.2 281,946 + SMa0522 0.39 +0.1 282,006 + SMa0522 0.47 +0.3 282,006 + SMa0522 0.47 -2.1 282,006 + SMa0522 0.47 +0.9 282,006 + SMa0522 0.47 -1.5 282,007 - SMa0522 0.47 -0.3 282,007 - SMa0522 0.47 +0.3 282,007 - SMa0522 0.47 +0.3 282,093 + SMa0522 0.59 +0.8 282,093 + SMa0522 0.59 +1.3 282,093 + SMa0522 0.59 -1.3 282,093 + SMa0522 0.59 -1.0 282,093 + SMa0522 0.59 +0.3 282,093 + SMa0522 0.59 +0.4 282,093 + SMa0522 0.59 +1.3 282,095 + SMa0522 0.59 -1.0 282,095 + SMa0522 0.59 +0.1 282,251 + SMa0522 0.81 +1.3 282,258 + SMa0522 0.81 +0.3 282,259 - SMa0522 0.82 -0.5 282,269 - SMa0522 0.83 +0.7 282,328 + +1.2 282,328 + -2.1 282,328 + +1.0 282,328 + +0.4 282,328 + +0.0 282,329 - +0.5 282,329 - -0.4 282,329 - +1.1 282,390 + +0.8 282,390 + -1.5 282,430 + SMa0523 0.14 +1.1 282,479 + SMa0523 0.26 -0.7 282,510 - SMa0523 0.34 +0.2 282,510 - SMa0523 0.34 +0.1 282,532 - SMa0523 0.39 +0.5 282,571 - SMa0523 0.49 +0.3 282,628 + SMa0523 0.63 +0.2 282,628 + SMa0523 0.63 +0.2 282,628 + SMa0523 0.63 -0.2 282,629 - SMa0523 0.63 -1.1 282,629 - SMa0523 0.63 +0.3 282,839 + +0.7 282,840 - -0.9 282,840 - +0.7 282,840 - -0.6 282,943 + +0.8 283,046 + SMa0525 0.15 +0.3 283,047 - SMa0525 0.15 +2.1 283,049 + SMa0525 0.15 -0.4 283,049 + SMa0525 0.15 -0.5 283,050 - SMa0525 0.15 +1.6 283,050 - SMa0525 0.15 +1.3 283,050 - SMa0525 0.15 +0.7 283,050 - SMa0525 0.15 -0.2 283,273 - SMa0525 0.28 +0.7 283,332 + SMa0525 0.31 -3.1 283,332 + SMa0525 0.31 -0.2 283,336 - SMa0525 0.31 -1.9 283,336 - SMa0525 0.31 +0.1 283,350 - SMa0525 0.32 +0.6 283,443 - SMa0525 0.37 -0.4 283,448 - SMa0525 0.37 +1.2 283,576 - SMa0525 0.44 -1.1 283,611 + SMa0525 0.46 -1.3 283,612 - SMa0525 0.46 +0.9 283,786 + SMa0525 0.56 -0.2 283,827 - SMa0525 0.58 -2.2 284,121 + SMa0525 0.75 -1.7 284,122 - SMa0525 0.75 -1.4 284,167 - SMa0525 0.77 -0.2 284,205 + SMa0525 0.79 -1.5 284,205 + SMa0525 0.79 -0.5 284,254 + SMa0525 0.82 +0.2 284,347 + SMa0525 0.87 +0.4 284,440 + -0.3 284,449 - -2.6 284,455 - -1.5 284,580 + +0.3 284,581 - -0.5 284,581 - +0.7 284,615 + -0.5 284,616 - +0.2 284,635 - -1.1 284,704 - SMa0526 0.12 -2.5 284,715 + SMa0526 0.13 -0.3 284,837 + SMa0526 0.25 +0.1 284,837 + SMa0526 0.25 +1.3 284,837 + SMa0526 0.25 -0.7 284,838 - SMa0526 0.25 +1.1 284,838 - SMa0526 0.25 +0.3 284,855 - SMa0526 0.27 +0.2 285,152 + SMa0526 0.55 -0.4 285,152 + SMa0526 0.55 -0.2 285,153 - SMa0526 0.55 -0.1 285,190 + SMa0526 0.59 -0.0 285,321 + SMa0526 0.71 -0.5 285,333 - SMa0526 0.72 +0.1 285,446 + SMa0526 0.83 +0.6
Or see this region's nucleotide sequence