Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4112

Experiment: Fusidic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.4 mg/ml
4,789,721	-				-0.5
4,789,721	-				+0.2
4,789,721	-				-1.0
4,789,741	+				+0.2
4,789,742	-				-0.7
4,789,742	-				+0.1
4,789,742	-				+1.0
4,789,797	+				+0.5
4,789,798	-				+0.3
4,789,803	-				-0.2
4,789,819	-				-1.1
4,789,819	-				+0.3
4,789,845	+				+0.3
4,789,845	+				-0.3
4,789,845	+				+1.3
4,789,845	+				+0.2
4,789,845	+				+0.1
4,789,846	-				-1.3
4,789,846	-				+0.4
4,789,846	-				-0.1
4,789,846	-				-0.2
4,789,868	+				+0.6
4,789,868	+				-0.1
4,789,868	+				-0.5
4,789,869	-				-0.2
4,789,869	-				-0.7
4,789,869	-				-1.0
4,789,871	+				+0.2
4,789,871	+				+0.0
4,789,872	-				-0.1
4,789,921	+				-0.5
4,789,922	-				-0.2
4,789,922	-				-0.2
4,789,922	-				+0.5
4,789,922	-				+0.9
4,789,922	-				-0.5
4,789,925	+				+0.4
4,789,925	+				-0.9
4,789,925	+				-0.9
4,789,983	+				+0.8
4,789,983	+				-0.7
4,789,984	-				-0.1
4,789,998	+				-0.5
4,789,999	-				+0.1
4,790,016	+				+1.3
4,790,016	+				-0.2
4,790,016	+				-0.0
4,790,016	+				-0.1
4,790,016	+				-0.9
4,790,016	+				-2.1
4,790,016	+				+1.5
4,790,017	-				-0.7
4,790,017	-				-1.1
4,790,017	-				-1.1
4,790,017	-				-0.0
4,790,017	-				+1.5
4,790,017	-				+0.1
4,790,017	-				+0.2
4,790,017	-				-0.7
4,790,018	+				+0.2
4,790,018	+				+0.0
4,790,018	+				+0.2
4,790,018	+				+0.5
4,790,018	+				+0.3
4,790,018	+				+0.5
4,790,019	-				+0.1
4,790,019	-				-0.6
4,790,019	-				+0.3
4,790,019	-				-0.5
4,790,019	-				+1.0
4,790,019	-				-0.8
4,790,019	-				-1.2
4,790,019	-				-0.0
4,790,019	-				+0.9
4,790,020	+				+0.1
4,790,020	+				-0.7
4,790,020	+				+1.6
4,790,020	+				-1.2
4,790,020	+				+0.3
4,790,020	+				+0.3
4,790,020	+				-0.9
4,790,020	+				-0.4
4,790,020	+				-0.8
4,790,020	+				-0.9
4,790,020	+				+0.0
4,790,020	+				+0.9
4,790,020	+				-0.8
4,790,020	+				-0.6
4,790,020	+				+1.4
4,790,020	+				+0.3
4,790,020	+				+0.7
4,790,020	+				+0.1
4,790,020	+				+0.8
4,790,020	+				+0.1
4,790,020	+				-0.2
4,790,020	+				+0.3
4,790,020	+				+0.5
4,790,021	-				+0.2
4,790,021	-				-0.1
4,790,021	-				+0.2
4,790,021	-				+0.9
4,790,021	-				+0.1
4,790,021	-				-0.3
4,790,021	-				-0.9
4,790,021	-				+0.3
4,790,021	-				+0.2
4,790,021	-				-0.2
4,790,021	-				+0.2
4,790,085	+				-0.6
4,790,085	+				+0.9
4,790,085	+				+0.2
4,790,085	+				-2.2
4,790,085	+				+0.9
4,790,086	-				-0.5
4,790,086	-				+1.1
4,790,091	+				+0.4
4,790,091	+				+0.0
4,790,091	+				-0.6
4,790,091	+				+1.0
4,790,091	+				+0.4
4,790,092	-				-0.1
4,790,096	+				+0.5
4,790,096	+				-1.6
4,790,096	+				-2.3
4,790,097	-				-0.2
4,790,147	+				-1.5
4,790,167	+				+1.7
4,790,167	+				-0.2
4,790,167	+				+0.5
4,790,168	-				+0.1
4,790,168	-				+1.0
4,790,200	+				-0.5
4,790,201	-				-1.8
4,790,288	+				-0.1
4,790,288	+				-1.7
4,790,288	+				+1.0
4,790,288	+				+0.3
4,790,288	+				+0.7
4,790,289	-				-0.0
4,790,353	+				-0.3
4,790,383	+				-0.7
4,790,384	-				-1.0
4,790,384	-				+0.5
4,790,384	-				-0.3
4,790,430	+				-0.6
4,790,431	-				+0.1
4,790,431	-				+1.7
4,790,443	-				-1.1
4,790,469	+				-1.5
4,790,469	+				-0.4
4,790,470	-				+0.2
4,790,470	-				+1.0
4,790,532	+				+1.3
4,790,532	+				+0.4
4,790,532	+				+0.1
4,790,532	+				-1.9
4,790,533	-				+0.1
4,790,533	-				-0.5
4,790,533	-				+0.3
4,790,695	+				+0.5
4,790,935	+		Pf6N2E2_4112	0.29	+0.2
4,790,935	+		Pf6N2E2_4112	0.29	-2.3
4,790,935	+		Pf6N2E2_4112	0.29	-1.0
4,790,935	+		Pf6N2E2_4112	0.29	-0.4
4,790,935	+		Pf6N2E2_4112	0.29	+0.3
4,790,936	-		Pf6N2E2_4112	0.29	-1.7
4,790,936	-		Pf6N2E2_4112	0.29	-1.3
4,790,936	-		Pf6N2E2_4112	0.29	+0.0
4,790,942	+		Pf6N2E2_4112	0.30	-0.1
4,790,959	+		Pf6N2E2_4112	0.32	+0.7
4,790,959	+		Pf6N2E2_4112	0.32	+0.1
4,790,959	+		Pf6N2E2_4112	0.32	-0.1
4,791,014	-		Pf6N2E2_4112	0.38	+1.2
4,791,090	+		Pf6N2E2_4112	0.47	-1.1
4,791,103	+		Pf6N2E2_4112	0.49	-0.3
4,791,103	+		Pf6N2E2_4112	0.49	-0.0
4,791,104	-		Pf6N2E2_4112	0.49	+0.7
4,791,115	+		Pf6N2E2_4112	0.50	+0.8
4,791,115	+		Pf6N2E2_4112	0.50	-0.5
4,791,115	+		Pf6N2E2_4112	0.50	-0.3
4,791,115	+		Pf6N2E2_4112	0.50	+0.2
4,791,129	+		Pf6N2E2_4112	0.52	+0.8
4,791,129	+		Pf6N2E2_4112	0.52	+0.4
4,791,129	+		Pf6N2E2_4112	0.52	-0.3
4,791,130	-		Pf6N2E2_4112	0.52	+0.2
4,791,130	-		Pf6N2E2_4112	0.52	+0.4
4,791,130	-		Pf6N2E2_4112	0.52	-0.3
4,791,132	+		Pf6N2E2_4112	0.52	+0.1
4,791,132	+		Pf6N2E2_4112	0.52	-1.6
4,791,132	+		Pf6N2E2_4112	0.52	-0.6
4,791,132	+		Pf6N2E2_4112	0.52	-0.6
4,791,132	+		Pf6N2E2_4112	0.52	-0.3
4,791,133	-		Pf6N2E2_4112	0.52	-1.8
4,791,133	-		Pf6N2E2_4112	0.52	+0.6
4,791,133	-		Pf6N2E2_4112	0.52	+1.7
4,791,135	+		Pf6N2E2_4112	0.53	-2.7
4,791,135	+		Pf6N2E2_4112	0.53	-0.7
4,791,135	+		Pf6N2E2_4112	0.53	+0.3
4,791,135	+		Pf6N2E2_4112	0.53	-0.5
4,791,135	+		Pf6N2E2_4112	0.53	-1.5
4,791,135	+		Pf6N2E2_4112	0.53	+0.3
4,791,135	+		Pf6N2E2_4112	0.53	-1.5
4,791,135	+		Pf6N2E2_4112	0.53	+1.0
4,791,135	+		Pf6N2E2_4112	0.53	-0.6
4,791,136	-		Pf6N2E2_4112	0.53	-0.6
4,791,136	-		Pf6N2E2_4112	0.53	+1.0
4,791,136	-		Pf6N2E2_4112	0.53	+0.9
4,791,136	-		Pf6N2E2_4112	0.53	-0.3
4,791,232	+		Pf6N2E2_4112	0.64	-2.8
4,791,232	+		Pf6N2E2_4112	0.64	-2.2
4,791,232	+		Pf6N2E2_4112	0.64	-0.7
4,791,232	+		Pf6N2E2_4112	0.64	-0.7
4,791,233	-		Pf6N2E2_4112	0.64	-1.2
4,791,233	-		Pf6N2E2_4112	0.64	+0.1
4,791,233	-		Pf6N2E2_4112	0.64	-0.2
4,791,332	+		Pf6N2E2_4112	0.76	+0.2
4,791,376	+		Pf6N2E2_4112	0.81	-0.3
4,791,377	-		Pf6N2E2_4112	0.81	-0.3
4,791,540	+				+0.3
4,791,540	+				-0.5
4,791,540	+				-1.3
4,791,540	+				-0.6
4,791,540	+				+0.7
4,791,540	+				-0.1
4,791,540	+				-3.8
4,791,540	+				-0.4
4,791,540	+				-0.9
4,791,541	-				+0.5
4,791,541	-				+0.3
4,791,541	-				+0.3
4,791,541	-				-0.7
4,791,541	-				+0.5
4,791,572	+				-0.6
4,791,572	+				-1.4
4,791,572	+				-1.7
4,791,572	+				+0.3
4,791,572	+				-1.1
4,791,572	+				-0.8
4,791,573	-				+0.6
4,791,580	+				-0.5
4,791,599	-				-0.7
4,791,599	-				+0.2
4,791,606	+				-0.1
4,791,607	-				+0.6
4,791,613	-				+1.1
4,791,613	-				+0.9
4,791,616	+				+0.5
4,791,616	+				+0.8
4,791,902	+		Pf6N2E2_4113	0.69	-0.2
4,791,903	-		Pf6N2E2_4113	0.69	+0.2
4,791,903	-		Pf6N2E2_4113	0.69	+1.0
4,791,985	+		Pf6N2E2_4113	0.89	-2.3
4,792,066	+				+0.4
4,792,066	+				+1.5
4,792,067	-				-0.1
4,792,067	-				+0.0
4,792,115	+				-0.2
4,792,116	-				-0.1
4,792,119	+				+0.8
4,792,119	+				+0.4
4,792,119	+				-0.1
4,792,230	+		Pf6N2E2_4114	0.36	-0.5
4,792,285	+		Pf6N2E2_4114	0.61	+0.6
4,792,285	+		Pf6N2E2_4114	0.61	+0.1
4,792,285	+		Pf6N2E2_4114	0.61	-0.3
4,792,286	-		Pf6N2E2_4114	0.62	+0.2
4,792,286	-		Pf6N2E2_4114	0.62	-0.5
4,792,306	+		Pf6N2E2_4114	0.71	+0.4
4,792,306	+		Pf6N2E2_4114	0.71	+0.3
4,792,307	-		Pf6N2E2_4114	0.71	-1.7
4,792,313	+		Pf6N2E2_4114	0.74	+0.3
4,792,357	+				+0.3
4,792,358	-				+1.2
4,792,359	+				+0.6
4,792,359	+				+0.1
4,792,507	-				-0.3
4,792,510	+				-0.7