Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_275

Experiment: Fusidic 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_273 and Pf6N2E2_274 overlap by 4 nucleotidesPf6N2E2_274 and Pf6N2E2_275 are separated by 2 nucleotidesPf6N2E2_275 and Pf6N2E2_276 are separated by 72 nucleotidesPf6N2E2_276 and Pf6N2E2_277 are separated by 10 nucleotides Pf6N2E2_273 - NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3), at 338,165 to 339,520 _273 Pf6N2E2_274 - NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3), at 339,517 to 340,014 _274 Pf6N2E2_275 - NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3), at 340,017 to 341,801 _275 Pf6N2E2_276 - NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3), at 341,874 to 342,548 _276 Pf6N2E2_277 - NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3), at 342,559 to 342,972 _277 Position (kb) 340 341 342Strain fitness (log2 ratio) -1 0 1at 341.828 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fusidic 0.4 mg/ml
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341,828 - -1.5

Or see this region's nucleotide sequence