Strain Fitness in Pantoea sp. MT58 around IAI47_08245

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
1,743,361	+		IAI47_08235	0.78	-2.2
1,743,368	-		IAI47_08235	0.79	+1.0
1,743,369	+		IAI47_08235	0.79	-1.7
1,743,369	+		IAI47_08235	0.79	+0.7
1,743,369	+		IAI47_08235	0.79	+0.1
1,743,369	+		IAI47_08235	0.79	+0.2
1,743,370	-		IAI47_08235	0.79	+0.4
1,743,419	+		IAI47_08235	0.84	+0.4
1,743,419	+		IAI47_08235	0.84	-1.2
1,743,419	+		IAI47_08235	0.84	+1.0
1,743,420	-		IAI47_08235	0.84	+0.0
1,743,420	-		IAI47_08235	0.84	-2.1
1,743,420	-		IAI47_08235	0.84	-1.6
1,743,422	+		IAI47_08235	0.84	-0.2
1,743,422	+		IAI47_08235	0.84	-0.5
1,743,422	+		IAI47_08235	0.84	-0.4
1,743,423	-		IAI47_08235	0.85	+0.0
1,743,423	-		IAI47_08235	0.85	-1.9
1,743,423	-		IAI47_08235	0.85	+3.0
1,743,423	-		IAI47_08235	0.85	+0.7
1,743,423	-		IAI47_08235	0.85	-1.2
1,743,454	+		IAI47_08235	0.88	-0.7
1,743,468	+		IAI47_08235	0.89	-0.3
1,743,468	+		IAI47_08235	0.89	-0.2
1,743,468	+		IAI47_08235	0.89	-0.5
1,743,469	-		IAI47_08235	0.89	-0.3
1,743,481	+				+1.3
1,743,538	-				+0.5
1,743,622	+				-0.6
1,743,642	+				-0.4
1,743,643	-				-0.1
1,743,643	-				-0.3
1,743,643	-				+1.4
1,743,801	+				+1.4
1,743,801	+				+0.1
1,743,802	-				-0.8
1,743,802	-				+0.4
1,743,802	-				+4.0
1,743,820	+				-0.9
1,743,820	+				+0.4
1,743,820	+				+0.1
1,743,820	+				+2.1
1,743,821	-				+0.1
1,743,821	-				-1.1
1,743,821	-				+0.7
1,743,821	-				+0.5
1,743,821	-				+2.0
1,743,821	-				+0.2
1,743,821	-				+0.4
1,743,821	-				+2.2
1,743,821	-				+0.7
1,743,821	-				-0.1
1,743,821	-				+2.9
1,743,974	+				-0.1
1,743,974	+				+0.1
1,743,993	+				+0.4
1,743,993	+				-2.1
1,744,135	-				+3.6
1,744,135	-				+1.9
1,744,135	-				+2.9
1,744,135	-				-1.2
1,744,219	+				+0.1
1,744,219	+				+1.2
1,744,220	-				-1.2
1,744,220	-				+0.1
1,744,220	-				+1.4
1,744,249	-				+0.2
1,744,258	+				-0.1
1,744,258	+				-1.2
1,744,258	+				-0.2
1,744,272	+				+1.8
1,744,272	+				+0.5
1,744,272	+				-1.9
1,744,273	-				+1.7
1,744,273	-				+1.8
1,744,273	-				+0.9
1,744,273	-				+1.0
1,744,273	-				+2.6
1,744,281	+				-1.5
1,744,282	-				+1.6
1,744,295	-				-0.2
1,744,302	-				+0.1
1,744,363	-		IAI47_08245	0.11	+0.7
1,744,376	-		IAI47_08245	0.13	+1.1
1,744,405	+		IAI47_08245	0.19	+0.4
1,744,406	-		IAI47_08245	0.19	+0.2
1,744,406	-		IAI47_08245	0.19	+1.0
1,744,406	-		IAI47_08245	0.19	+2.2
1,744,417	+		IAI47_08245	0.21	+0.5
1,744,417	+		IAI47_08245	0.21	-0.5
1,744,417	+		IAI47_08245	0.21	-0.2
1,744,418	-		IAI47_08245	0.21	+0.0
1,744,418	-		IAI47_08245	0.21	+0.0
1,744,432	+		IAI47_08245	0.24	+1.0
1,744,433	-		IAI47_08245	0.24	+1.5
1,744,587	-		IAI47_08245	0.53	+0.1
1,744,637	-		IAI47_08245	0.62	+1.0
1,744,711	+		IAI47_08245	0.76	-0.7
1,744,711	+		IAI47_08245	0.76	+1.0
1,744,711	+		IAI47_08245	0.76	+0.4
1,744,712	-		IAI47_08245	0.76	+1.4
1,744,721	+		IAI47_08245	0.78	+0.4
1,744,721	+		IAI47_08245	0.78	+1.7
1,744,722	-		IAI47_08245	0.78	+2.0
1,744,722	-		IAI47_08245	0.78	+6.1
1,744,740	-		IAI47_08245	0.81	+0.8
1,744,742	-		IAI47_08245	0.82	+1.0
1,744,742	-		IAI47_08245	0.82	+0.9
1,744,742	-		IAI47_08245	0.82	+0.9
1,744,762	-		IAI47_08245	0.86	+1.2
1,744,778	+		IAI47_08245	0.89	-1.1
1,744,778	+		IAI47_08245	0.89	-0.2
1,744,779	-		IAI47_08245	0.89	-0.2
1,744,779	-		IAI47_08245	0.89	+1.0
1,744,817	+				-1.7
1,744,825	+				-2.5
1,744,826	-				-0.3
1,744,826	-				+4.0
1,744,838	+				-0.1
1,744,838	+				+0.2
1,744,838	+				-0.6
1,744,839	-				-0.2
1,744,839	-				+1.8
1,744,839	-				-0.2
1,744,841	+				-0.7
1,744,841	+				+0.1
1,744,841	+				-0.9
1,744,841	+				+0.3
1,744,841	+				+0.0
1,744,841	+				-1.5
1,744,842	-				-1.5
1,744,842	-				+0.4
1,744,846	+				-2.6
1,744,847	-				+0.2
1,744,847	-				+0.2
1,744,899	+				-0.5
1,744,899	+				-0.4
1,744,899	+				+0.1
1,744,899	+				-1.1
1,744,900	-				+0.2
1,744,900	-				-0.8
1,744,900	-				-0.3
1,744,900	-				+0.0
1,744,941	-				+1.9
1,744,979	-		IAI47_08250	0.14	-0.8
1,744,979	-		IAI47_08250	0.14	+0.5
1,744,979	-		IAI47_08250	0.14	+1.2
1,744,980	+		IAI47_08250	0.14	-0.2
1,744,980	+		IAI47_08250	0.14	-1.0
1,744,980	+		IAI47_08250	0.14	-1.2
1,744,981	-		IAI47_08250	0.15	-0.7
1,744,981	-		IAI47_08250	0.15	+0.4
1,744,981	-		IAI47_08250	0.15	+1.2
1,745,052	+		IAI47_08250	0.27	-1.2
1,745,052	+		IAI47_08250	0.27	-0.7
1,745,052	+		IAI47_08250	0.27	+1.4
1,745,052	+		IAI47_08250	0.27	-1.0
1,745,053	-		IAI47_08250	0.27	+0.3
1,745,053	-		IAI47_08250	0.27	-0.3
1,745,053	-		IAI47_08250	0.27	-0.1
1,745,053	-		IAI47_08250	0.27	-0.7
1,745,053	-		IAI47_08250	0.27	+0.3
1,745,053	-		IAI47_08250	0.27	+1.2
1,745,053	-		IAI47_08250	0.27	-1.4
1,745,053	-		IAI47_08250	0.27	+2.0
1,745,053	-		IAI47_08250	0.27	-0.1
1,745,053	-		IAI47_08250	0.27	+0.6
1,745,053	-		IAI47_08250	0.27	-0.1
1,745,056	+		IAI47_08250	0.28	+1.4
1,745,076	+		IAI47_08250	0.31	+0.5
1,745,077	-		IAI47_08250	0.32	+0.7
1,745,170	+		IAI47_08250	0.48	-1.6
1,745,204	+		IAI47_08250	0.54	+2.5
1,745,205	-		IAI47_08250	0.54	+1.4
1,745,205	-		IAI47_08250	0.54	+1.3
1,745,205	-		IAI47_08250	0.54	+2.0
1,745,373	+		IAI47_08250	0.84	+0.3
1,745,373	+		IAI47_08250	0.84	+0.0
1,745,374	-		IAI47_08250	0.84	-0.7
1,745,374	-		IAI47_08250	0.84	+0.4
1,745,374	-		IAI47_08250	0.84	-0.1
1,745,412	+				-2.0
1,745,413	-				-0.3
1,745,425	+				-0.5
1,745,425	+				+1.0
1,745,426	-				+0.0
1,745,442	+				-0.2
1,745,442	+				-0.2
1,745,442	+				-1.1
1,745,443	-				-1.0
1,745,443	-				+1.7
1,745,469	+				+0.4
1,745,469	+				+1.3
1,745,469	+				-2.0
1,745,470	-				-0.4
1,745,470	-				-0.9
1,745,470	-				+1.4
1,745,470	-				-1.9
1,745,470	-				+0.3
1,745,479	-				+1.4
1,745,483	+				-2.0
1,745,483	+				+1.3
1,745,484	-				+0.2
1,745,495	+				+1.1
1,745,496	-				-2.1
1,745,496	-				+1.4
1,745,501	+				-1.3
1,745,501	+				+1.4
1,745,501	+				-0.2
1,745,501	+				-0.8
1,745,502	-				+1.1
1,745,502	-				+2.0
1,745,502	-				+2.7
1,745,502	-				+0.3
1,745,502	-				+1.0
1,745,517	+				-0.8
1,745,518	-				-0.5
1,745,556	-				-0.5
1,745,581	+				-1.2
1,745,582	-				+1.4
1,745,582	-				+0.3
1,745,582	-				-1.2
1,745,582	-				+0.1
1,745,601	-				+1.4
1,745,611	+				+0.7
1,745,612	-				+0.1
1,745,614	+				-0.2
1,745,614	+				-0.2
1,745,614	+				+1.2
1,745,614	+				-1.1
1,745,615	-				+0.5
1,745,649	+				-0.1
1,745,652	+				-2.3
1,745,652	+				+0.7
1,745,652	+				-0.5
1,745,652	+				-0.6
1,745,652	+				-0.5
1,745,653	-				+0.9
1,745,653	-				+0.3
1,745,653	-				-0.2
1,745,653	-				+3.0
1,745,656	-				-0.2
1,745,666	+				+0.2
1,745,667	-				-1.2
1,745,667	-				+0.4
1,745,667	-				+1.4
1,745,685	+				+0.1
1,745,685	+				+0.0
1,745,710	+				+2.4
1,745,711	-				+0.8
1,745,711	-				+0.0
1,745,711	-				-0.6
1,745,711	-				+1.6
1,745,711	-				-0.4
1,745,766	+				+1.1
1,745,766	+				-1.7
1,745,767	-				+1.2