Experiment: L-Malic (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS20710 and HSERO_RS20715 are separated by 391 nucleotides HSERO_RS20715 and HSERO_RS20720 are separated by 4 nucleotides HSERO_RS20720 and HSERO_RS20725 overlap by 4 nucleotides
HSERO_RS20710: HSERO_RS20710 - peptidase M16, at 4,746,046 to 4,747,425
_RS20710
HSERO_RS20715: HSERO_RS20715 - cell division protein FtsY, at 4,747,817 to 4,748,782
_RS20715
HSERO_RS20720: HSERO_RS20720 - GMP synthase, at 4,748,787 to 4,749,479
_RS20720
HSERO_RS20725: HSERO_RS20725 - permease, at 4,749,476 to 4,750,399
_RS20725
Position (kb) 4747
4748
4749 Strain fitness (log2 ratio) -1
0
1 at 4746.827 kb on + strand, within HSERO_RS20710 at 4746.835 kb on - strand, within HSERO_RS20710 at 4746.876 kb on - strand, within HSERO_RS20710 at 4746.899 kb on + strand, within HSERO_RS20710 at 4746.913 kb on + strand, within HSERO_RS20710 at 4746.977 kb on - strand, within HSERO_RS20710 at 4747.080 kb on + strand, within HSERO_RS20710 at 4747.259 kb on - strand, within HSERO_RS20710 at 4747.259 kb on - strand, within HSERO_RS20710 at 4747.259 kb on - strand, within HSERO_RS20710 at 4747.359 kb on + strand at 4747.367 kb on - strand at 4747.396 kb on + strand at 4747.396 kb on + strand at 4747.414 kb on - strand at 4748.853 kb on - strand at 4748.926 kb on - strand, within HSERO_RS20720 at 4748.997 kb on - strand, within HSERO_RS20720 at 4749.152 kb on + strand, within HSERO_RS20720 at 4749.152 kb on + strand, within HSERO_RS20720 at 4749.160 kb on - strand, within HSERO_RS20720 at 4749.165 kb on - strand, within HSERO_RS20720 at 4749.178 kb on - strand, within HSERO_RS20720 at 4749.242 kb on + strand, within HSERO_RS20720 at 4749.293 kb on - strand, within HSERO_RS20720 at 4749.340 kb on + strand, within HSERO_RS20720 at 4749.353 kb on - strand, within HSERO_RS20720 at 4749.592 kb on - strand, within HSERO_RS20725 at 4749.592 kb on - strand, within HSERO_RS20725 at 4749.616 kb on - strand, within HSERO_RS20725
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 3 days remove 4,746,827 + HSERO_RS20710 0.57 +0.1 4,746,835 - HSERO_RS20710 0.57 -0.1 4,746,876 - HSERO_RS20710 0.60 +0.5 4,746,899 + HSERO_RS20710 0.62 -0.1 4,746,913 + HSERO_RS20710 0.63 +0.1 4,746,977 - HSERO_RS20710 0.67 +0.5 4,747,080 + HSERO_RS20710 0.75 +0.0 4,747,259 - HSERO_RS20710 0.88 -0.0 4,747,259 - HSERO_RS20710 0.88 -0.0 4,747,259 - HSERO_RS20710 0.88 -0.2 4,747,359 + +0.0 4,747,367 - +0.6 4,747,396 + +1.1 4,747,396 + +0.2 4,747,414 - -0.3 4,748,853 - +0.5 4,748,926 - HSERO_RS20720 0.20 +1.3 4,748,997 - HSERO_RS20720 0.30 +0.4 4,749,152 + HSERO_RS20720 0.53 +1.1 4,749,152 + HSERO_RS20720 0.53 +0.4 4,749,160 - HSERO_RS20720 0.54 +0.2 4,749,165 - HSERO_RS20720 0.55 +0.1 4,749,178 - HSERO_RS20720 0.56 +0.7 4,749,242 + HSERO_RS20720 0.66 +0.3 4,749,293 - HSERO_RS20720 0.73 +0.5 4,749,340 + HSERO_RS20720 0.80 +0.2 4,749,353 - HSERO_RS20720 0.82 +0.2 4,749,592 - HSERO_RS20725 0.13 +0.2 4,749,592 - HSERO_RS20725 0.13 +0.3 4,749,616 - HSERO_RS20725 0.15 +0.1
Or see this region's nucleotide sequence