Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02508

Experiment: PYE 25C survival rep1 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 25C survival rep1 28 days
2,657,350	+		CCNA_02507	0.47	-0.7
2,657,376	+		CCNA_02507	0.48	+0.8
2,657,388	-		CCNA_02507	0.49	-0.2
2,657,388	-		CCNA_02507	0.49	-0.6
2,657,422	+		CCNA_02507	0.51	+0.9
2,657,442	-		CCNA_02507	0.53	+2.3
2,657,447	+		CCNA_02507	0.53	+0.3
2,657,474	+		CCNA_02507	0.55	+1.1
2,657,474	+		CCNA_02507	0.55	+0.6
2,657,489	+		CCNA_02507	0.56	+2.5
2,657,532	-		CCNA_02507	0.59	-0.9
2,657,540	+		CCNA_02507	0.59	+2.2
2,657,540	+		CCNA_02507	0.59	+1.4
2,657,560	+		CCNA_02507	0.60	+0.2
2,657,568	-		CCNA_02507	0.61	-0.3
2,657,568	-		CCNA_02507	0.61	+0.8
2,657,568	-		CCNA_02507	0.61	-1.4
2,657,568	-		CCNA_02507	0.61	+0.8
2,657,583	-		CCNA_02507	0.62	+0.3
2,657,586	+		CCNA_02507	0.62	+0.4
2,657,591	+		CCNA_02507	0.63	+1.5
2,657,599	-				-0.8
2,657,645	+		CCNA_02507	0.66	+0.4
2,657,653	-		CCNA_02507	0.67	+3.3
2,657,655	+		CCNA_02507	0.67	+0.3
2,657,663	-		CCNA_02507	0.67	+0.9
2,657,663	-		CCNA_02507	0.67	+1.3
2,657,670	+		CCNA_02507	0.68	+0.7
2,657,689	-		CCNA_02507	0.69	-0.8
2,657,755	-		CCNA_02507	0.73	+0.8
2,657,765	+		CCNA_02507	0.74	+0.8
2,657,773	-		CCNA_02507	0.75	+0.0
2,657,773	-		CCNA_02507	0.75	+0.6
2,657,778	-		CCNA_02507	0.75	-0.9
2,657,826	+		CCNA_02507	0.78	+0.3
2,657,826	+		CCNA_02507	0.78	+0.3
2,657,828	-		CCNA_02507	0.78	-0.4
2,657,834	-		CCNA_02507	0.79	-0.5
2,657,834	-		CCNA_02507	0.79	+0.3
2,657,848	+		CCNA_02507	0.80	+1.6
2,657,853	-		CCNA_02507	0.80	-2.6
2,657,927	-		CCNA_02507	0.85	+0.1
2,657,927	-		CCNA_02507	0.85	+0.5
2,657,971	+		CCNA_02507	0.88	+0.8
2,657,973	-		CCNA_02507	0.88	-1.5
2,658,001	-		CCNA_02507	0.90	-0.2
2,658,012	+				-0.2
2,658,067	+				+1.1
2,658,087	+				+1.0
2,658,102	-				+1.3
2,658,148	+				+0.3
2,658,203	+				+1.3
2,658,224	+				+0.8
2,658,229	+				+1.2
2,658,232	-				-0.3
2,658,261	+				+0.5
2,658,273	+				+1.1
2,658,279	+				+1.8
2,658,296	+				+0.7
2,658,302	-				+2.3
2,658,306	+				+0.3
2,658,314	-				+2.3
2,658,323	+				+1.0
2,658,323	+				+1.6
2,658,336	-				+0.0
2,658,350	+				+1.0
2,658,350	+				-0.0
2,658,350	+				+0.8
2,658,350	+				+0.4
2,658,350	+				+0.5
2,658,358	-				-1.2
2,658,358	-				+1.3
2,658,365	+				+0.3
2,658,365	+				-0.3
2,658,373	-				+2.3
2,658,418	-				+0.3
2,658,421	+				+3.7
2,658,426	+				+0.0
2,658,426	+				-0.8
2,658,426	+				-0.4
2,658,434	-				+2.3
2,658,441	+				+1.5
2,658,456	+				-0.1
2,658,456	+				-0.4
2,658,456	+				+2.4
2,658,456	+				+0.4
2,658,464	-				-2.1
2,658,464	-				-1.0
2,658,471	+		CCNA_02508	0.10	+1.0
2,658,479	-		CCNA_02508	0.11	-0.2
2,658,479	-		CCNA_02508	0.11	+2.3
2,658,524	+		CCNA_02508	0.14	+2.3
2,658,524	+		CCNA_02508	0.14	+0.4
2,658,575	+		CCNA_02508	0.18	+0.3
2,658,602	+		CCNA_02508	0.21	-1.2
2,658,603	+		CCNA_02508	0.21	+0.7
2,658,610	-		CCNA_02508	0.21	+0.3
2,658,627	-		CCNA_02508	0.23	+1.9
2,658,630	+		CCNA_02508	0.23	+0.7
2,658,638	-		CCNA_02508	0.23	-1.0
2,658,638	-		CCNA_02508	0.23	+0.9
2,658,638	-		CCNA_02508	0.23	-0.3
2,658,643	-		CCNA_02508	0.24	-2.3
2,658,659	-		CCNA_02508	0.25	-0.4
2,658,659	-		CCNA_02508	0.25	+0.0
2,658,680	+		CCNA_02508	0.27	-0.1
2,658,693	+		CCNA_02508	0.28	+1.2
2,658,722	-		CCNA_02508	0.30	-0.7
2,658,768	+		CCNA_02508	0.34	+0.9
2,658,776	-		CCNA_02508	0.34	-1.8
2,658,813	+		CCNA_02508	0.37	+0.7
2,658,821	-		CCNA_02508	0.38	+2.3
2,658,825	+		CCNA_02508	0.38	-0.2
2,658,830	+		CCNA_02508	0.39	-2.0
2,658,838	-		CCNA_02508	0.39	-0.6
2,658,838	-		CCNA_02508	0.39	+3.3
2,658,838	-		CCNA_02508	0.39	-1.0
2,658,901	+		CCNA_02508	0.44	+1.9
2,658,938	-		CCNA_02508	0.47	-1.4
2,658,938	-		CCNA_02508	0.47	+1.0
2,658,958	+		CCNA_02508	0.49	+1.0
2,658,958	+		CCNA_02508	0.49	+1.1
2,658,963	+		CCNA_02508	0.49	-0.4
2,659,007	-		CCNA_02508	0.53	+3.5
2,659,139	-		CCNA_02508	0.63	+0.0
2,659,200	+		CCNA_02508	0.68	-0.2
2,659,200	+		CCNA_02508	0.68	-0.9
2,659,201	+		CCNA_02508	0.68	+0.2
2,659,201	+		CCNA_02508	0.68	+1.0
2,659,232	-		CCNA_02508	0.70	+1.6
2,659,257	-		CCNA_02508	0.72	-0.7
2,659,257	-		CCNA_02508	0.72	+1.9
2,659,259	+		CCNA_02508	0.73	+0.9
2,659,262	-		CCNA_02508	0.73	-1.1
2,659,276	+		CCNA_02508	0.74	+0.5
2,659,277	-		CCNA_02508	0.74	-2.0
2,659,277	-		CCNA_02508	0.74	+0.1
2,659,277	-		CCNA_02508	0.74	+0.3
2,659,284	-		CCNA_02508	0.75	-1.0
2,659,294	+		CCNA_02508	0.75	+1.8
2,659,303	-		CCNA_02508	0.76	-0.4
2,659,307	-		CCNA_02508	0.76	+0.8
2,659,326	+		CCNA_02508	0.78	+1.1
2,659,341	-		CCNA_02508	0.79	-0.5
2,659,341	-		CCNA_02508	0.79	+0.3
2,659,356	+		CCNA_02508	0.80	+0.8
2,659,381	+		CCNA_02508	0.82	-0.5
2,659,389	-		CCNA_02508	0.83	+0.1
2,659,404	+		CCNA_02508	0.84	+1.2
2,659,409	+		CCNA_02508	0.84	-0.9
2,659,412	-		CCNA_02508	0.85	-0.7
2,659,417	-		CCNA_02508	0.85	-0.2
2,659,428	+		CCNA_02508	0.86	-3.2
2,659,433	+		CCNA_02508	0.86	+0.9
2,659,436	-		CCNA_02508	0.87	+1.3
2,659,441	-		CCNA_02508	0.87	-0.7
2,659,457	+		CCNA_02508	0.88	-0.5
2,659,478	+				+2.0
2,659,485	-				-0.5
2,659,487	+				-0.7
2,659,496	+				-1.2
2,659,536	+				+2.8
2,659,559	-				+2.5
2,659,568	+				-1.5
2,659,578	-				-0.8
2,659,578	-				-0.3
2,659,589	+				-0.7
2,659,618	-				+3.9
2,659,665	+				+0.1
2,659,670	+				-0.9
2,659,683	-				-0.9
2,659,708	+		CCNA_02509	0.12	+2.6
2,659,708	+		CCNA_02509	0.12	-0.4
2,659,708	+		CCNA_02509	0.12	-1.8
2,659,708	+		CCNA_02509	0.12	+1.2
2,659,708	+		CCNA_02509	0.12	-1.6
2,659,711	-		CCNA_02509	0.12	-0.1
2,659,715	+		CCNA_02509	0.12	-0.1
2,659,715	+		CCNA_02509	0.12	-0.8
2,659,715	+		CCNA_02509	0.12	-1.3
2,659,716	-		CCNA_02509	0.12	-1.6
2,659,716	-		CCNA_02509	0.12	-3.4
2,659,716	-		CCNA_02509	0.12	-1.7
2,659,716	-		CCNA_02509	0.12	-2.3
2,659,716	-		CCNA_02509	0.12	+3.3
2,659,716	-		CCNA_02509	0.12	+2.3
2,659,716	-		CCNA_02509	0.12	-0.3
2,659,720	+		CCNA_02509	0.13	+1.2
2,659,734	-		CCNA_02509	0.14	+0.9
2,659,812	-		CCNA_02509	0.23	+1.3
2,659,902	+		CCNA_02509	0.32	+0.7
2,659,923	+		CCNA_02509	0.35	+0.7
2,659,949	+		CCNA_02509	0.37	-1.8
2,659,965	-		CCNA_02509	0.39	+1.0
2,659,970	-		CCNA_02509	0.40	-1.8
2,660,004	+		CCNA_02509	0.43	-0.8
2,660,019	+		CCNA_02509	0.45	+0.6
2,660,019	+		CCNA_02509	0.45	+1.0
2,660,023	-		CCNA_02509	0.45	+1.3
2,660,024	+		CCNA_02509	0.45	+0.3
2,660,050	-		CCNA_02509	0.48	+0.8
2,660,053	+		CCNA_02509	0.49	-0.0
2,660,060	+		CCNA_02509	0.49	+0.5
2,660,060	+		CCNA_02509	0.49	+0.2
2,660,060	+		CCNA_02509	0.49	+1.1
2,660,060	+		CCNA_02509	0.49	+2.2
2,660,068	-		CCNA_02509	0.50	+1.7
2,660,068	-		CCNA_02509	0.50	+3.3
2,660,082	-		CCNA_02509	0.52	-2.4
2,660,095	+		CCNA_02509	0.53	+2.4
2,660,095	+		CCNA_02509	0.53	+1.2
2,660,138	-		CCNA_02509	0.58	+0.0
2,660,166	+		CCNA_02509	0.61	+3.3
2,660,186	+		CCNA_02509	0.63	+0.4
2,660,201	+		CCNA_02509	0.65	+1.3
2,660,209	-		CCNA_02509	0.65	+0.6
2,660,209	-		CCNA_02509	0.65	+0.4
2,660,209	-		CCNA_02509	0.65	+2.1
2,660,209	-		CCNA_02509	0.65	-0.3
2,660,231	-		CCNA_02509	0.68	-0.4
2,660,248	-		CCNA_02509	0.70	+0.4
2,660,281	-		CCNA_02509	0.73	+1.5
2,660,281	-		CCNA_02509	0.73	-2.4
2,660,354	+		CCNA_02509	0.81	-2.8
2,660,400	+		CCNA_02509	0.86	-0.2
2,660,403	-		CCNA_02509	0.86	-1.6
2,660,452	+				+0.9
2,660,460	-				-1.9
2,660,494	+				+0.0
2,660,494	+				-1.6
2,660,515	-				-0.6
2,660,515	-				+0.3
2,660,525	+				+1.0
2,660,559	-				-0.5
2,660,576	+				-1.2