Strain Fitness in Pantoea sp. MT58 around IAI47_15735

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
3,316,270	-				-0.3
3,316,270	-				+0.0
3,316,270	-				-0.8
3,316,270	-				-0.7
3,316,270	-				+1.6
3,316,384	-		IAI47_15730	0.11	-0.5
3,316,418	+		IAI47_15730	0.14	-1.1
3,316,418	+		IAI47_15730	0.14	-0.7
3,316,418	+		IAI47_15730	0.14	-1.8
3,316,418	+		IAI47_15730	0.14	-1.8
3,316,418	+		IAI47_15730	0.14	-0.5
3,316,418	+		IAI47_15730	0.14	-2.1
3,316,418	+		IAI47_15730	0.14	-1.3
3,316,419	-		IAI47_15730	0.15	-0.8
3,316,419	-		IAI47_15730	0.15	+0.3
3,316,419	-		IAI47_15730	0.15	-0.5
3,316,460	+		IAI47_15730	0.19	-2.6
3,316,460	+		IAI47_15730	0.19	-2.1
3,316,460	+		IAI47_15730	0.19	-0.3
3,316,460	+		IAI47_15730	0.19	-3.6
3,316,460	+		IAI47_15730	0.19	-1.9
3,316,460	+		IAI47_15730	0.19	-1.2
3,316,460	+		IAI47_15730	0.19	-0.8
3,316,461	-		IAI47_15730	0.19	-1.0
3,316,461	-		IAI47_15730	0.19	-0.6
3,316,481	+		IAI47_15730	0.21	-1.2
3,316,481	+		IAI47_15730	0.21	-0.5
3,316,482	-		IAI47_15730	0.21	-0.3
3,316,482	-		IAI47_15730	0.21	-1.3
3,316,629	+		IAI47_15730	0.36	+0.1
3,316,629	+		IAI47_15730	0.36	-1.1
3,316,630	-		IAI47_15730	0.36	+0.9
3,316,700	-		IAI47_15730	0.43	-2.0
3,316,740	+		IAI47_15730	0.47	-0.3
3,316,740	+		IAI47_15730	0.47	+0.5
3,316,741	-		IAI47_15730	0.47	-0.8
3,316,741	-		IAI47_15730	0.47	-1.5
3,316,741	-		IAI47_15730	0.47	-3.4
3,316,741	-		IAI47_15730	0.47	+0.0
3,316,741	-		IAI47_15730	0.47	-0.2
3,316,741	-		IAI47_15730	0.47	+0.6
3,316,741	-		IAI47_15730	0.47	+0.1
3,316,782	+		IAI47_15730	0.52	-2.5
3,316,782	+		IAI47_15730	0.52	-0.6
3,316,790	+		IAI47_15730	0.52	-2.3
3,316,790	+		IAI47_15730	0.52	-0.4
3,316,791	-		IAI47_15730	0.52	-0.7
3,316,805	+		IAI47_15730	0.54	-0.4
3,316,842	+		IAI47_15730	0.58	-1.2
3,316,853	+		IAI47_15730	0.59	-1.8
3,316,854	-		IAI47_15730	0.59	+1.6
3,316,904	-		IAI47_15730	0.64	-0.6
3,316,948	+		IAI47_15730	0.69	-1.3
3,316,949	-		IAI47_15730	0.69	-0.0
3,316,949	-		IAI47_15730	0.69	-0.2
3,317,040	+		IAI47_15730	0.78	-1.4
3,317,040	+		IAI47_15730	0.78	-3.3
3,317,119	-		IAI47_15730	0.86	+0.4
3,317,134	-		IAI47_15730	0.87	-1.2
3,317,134	-		IAI47_15730	0.87	-0.3
3,317,134	-		IAI47_15730	0.87	-1.5
3,317,194	-				-2.0
3,317,194	-				-1.7
3,317,245	-				-0.8
3,317,250	+				-1.0
3,317,251	-				-2.0
3,317,272	+				-0.4
3,317,273	-				+0.5
3,317,273	-				+0.8
3,317,288	+				+1.1
3,317,288	+				+1.4
3,317,289	-				+0.9
3,317,289	-				-2.0
3,317,289	-				+1.6
3,317,289	-				+1.6
3,317,289	-				-0.2
3,317,296	+				+0.7
3,317,296	+				+0.6
3,317,297	-				-0.4
3,317,297	-				+2.5
3,317,341	+				-1.1
3,317,341	+				-0.2
3,317,342	-				+0.3
3,317,342	-				-0.0
3,317,354	-				+1.1
3,317,460	+		IAI47_15735	0.17	-1.0
3,317,460	+		IAI47_15735	0.17	-2.7
3,317,460	+		IAI47_15735	0.17	+0.6
3,317,460	+		IAI47_15735	0.17	-0.2
3,317,460	+		IAI47_15735	0.17	-0.7
3,317,460	+		IAI47_15735	0.17	+0.5
3,317,460	+		IAI47_15735	0.17	-0.8
3,317,461	-		IAI47_15735	0.17	-0.2
3,317,461	-		IAI47_15735	0.17	+0.2
3,317,666	-		IAI47_15735	0.33	+1.6
3,317,666	-		IAI47_15735	0.33	-0.7
3,317,708	-		IAI47_15735	0.36	+0.6
3,317,708	-		IAI47_15735	0.36	-0.9
3,317,708	-		IAI47_15735	0.36	-0.9
3,317,855	+		IAI47_15735	0.48	-1.0
3,317,856	-		IAI47_15735	0.48	-0.1
3,317,908	+		IAI47_15735	0.52	+0.8
3,317,945	+		IAI47_15735	0.55	-0.7
3,317,945	+		IAI47_15735	0.55	+1.0
3,317,946	-		IAI47_15735	0.55	-1.8
3,317,946	-		IAI47_15735	0.55	+2.4
3,317,946	-		IAI47_15735	0.55	-2.6
3,317,946	-		IAI47_15735	0.55	-0.8
3,317,946	-		IAI47_15735	0.55	+1.2
3,317,946	-		IAI47_15735	0.55	-0.2
3,317,946	-		IAI47_15735	0.55	-0.7
3,317,946	-		IAI47_15735	0.55	+0.8
3,317,946	-		IAI47_15735	0.55	+1.8
3,317,946	-		IAI47_15735	0.55	+1.3
3,317,946	-		IAI47_15735	0.55	+0.8
3,318,288	+		IAI47_15735	0.82	-1.6
3,318,289	-		IAI47_15735	0.82	-0.2
3,318,296	+		IAI47_15735	0.83	-2.1
3,318,296	+		IAI47_15735	0.83	-3.0
3,318,296	+		IAI47_15735	0.83	+0.1
3,318,296	+		IAI47_15735	0.83	-1.0
3,318,297	-		IAI47_15735	0.83	+1.3
3,318,352	+		IAI47_15735	0.87	+0.8
3,318,352	+		IAI47_15735	0.87	-1.6
3,318,359	+		IAI47_15735	0.87	+1.3
3,318,360	-		IAI47_15735	0.88	+0.5
3,318,416	+				-0.7
3,318,416	+				-1.8
3,318,416	+				-0.1
3,318,416	+				+0.1
3,318,416	+				-1.9
3,318,416	+				-0.1
3,318,416	+				-0.2
3,318,416	+				-0.7
3,318,416	+				-1.1
3,318,416	+				-1.0
3,318,416	+				+0.9
3,318,416	+				-2.2
3,318,417	-				-0.7
3,318,417	-				+0.4
3,318,417	-				+0.5
3,318,417	-				+0.9
3,318,417	-				+0.0
3,318,417	-				-0.1
3,318,445	+				-0.4
3,318,446	-				-1.9
3,318,446	-				+0.6
3,318,446	-				-1.4
3,318,446	-				-0.6
3,318,446	-				-1.5
3,318,457	+				-0.9
3,318,457	+				-1.1
3,318,457	+				+0.5
3,318,458	-				+1.6
3,318,503	+				-1.2
3,318,600	+				-1.5
3,318,608	+				-1.2
3,318,608	+				-1.7
3,318,609	-				+1.0
3,318,609	-				+1.0
3,318,609	-				-1.7
3,318,609	-				+0.1
3,318,609	-				+2.1
3,318,609	-				-1.0
3,318,615	+				+0.8
3,318,617	+				+2.3
3,318,618	-				+2.8
3,318,618	-				-0.7
3,318,618	-				-0.3
3,318,618	-				-2.4
3,318,618	-				-0.4
3,318,623	+				+0.0
3,318,710	+				-0.3
3,318,713	+				+0.1
3,318,713	+				-1.0
3,318,713	+				-2.2
3,318,713	+				+0.5
3,318,713	+				-0.5
3,318,714	-				+1.2
3,318,714	-				-2.5
3,318,736	-				-0.6
3,318,746	-				-1.4
3,318,759	+				-1.9
3,318,759	+				+0.6
3,318,760	-				-0.4
3,318,760	-				-0.9
3,318,775	+				-0.5
3,318,776	-				+0.4
3,318,787	+				+0.5
3,318,866	+		IAI47_15740	0.14	-1.3
3,318,924	-		IAI47_15740	0.19	+0.4
3,318,925	+		IAI47_15740	0.19	+1.5
3,318,926	-		IAI47_15740	0.19	-2.8
3,318,926	-		IAI47_15740	0.19	-0.0
3,318,926	-		IAI47_15740	0.19	-0.6
3,318,926	-		IAI47_15740	0.19	-0.8
3,319,172	+		IAI47_15740	0.41	-0.8
3,319,173	-		IAI47_15740	0.41	+1.3
3,319,173	-		IAI47_15740	0.41	+0.4
3,319,173	-		IAI47_15740	0.41	+1.0
3,319,173	-		IAI47_15740	0.41	-1.0
3,319,326	+		IAI47_15740	0.54	-1.3
3,319,326	+		IAI47_15740	0.54	+1.9
3,319,326	+		IAI47_15740	0.54	-0.4
3,319,326	+		IAI47_15740	0.54	-0.8
3,319,326	+		IAI47_15740	0.54	-0.9
3,319,326	+		IAI47_15740	0.54	+1.1
3,319,327	-		IAI47_15740	0.54	-1.1
3,319,327	-		IAI47_15740	0.54	-0.5
3,319,327	-		IAI47_15740	0.54	-0.2
3,319,327	-		IAI47_15740	0.54	-0.1
3,319,327	-		IAI47_15740	0.54	+0.0
3,319,327	-		IAI47_15740	0.54	-0.3
3,319,327	-		IAI47_15740	0.54	-1.1
3,319,425	+		IAI47_15740	0.63	+0.4
3,319,425	+		IAI47_15740	0.63	-0.1
3,319,425	+		IAI47_15740	0.63	+1.5
3,319,425	+		IAI47_15740	0.63	-0.7
3,319,425	+		IAI47_15740	0.63	-0.2
3,319,425	+		IAI47_15740	0.63	-1.3
3,319,426	-		IAI47_15740	0.63	+1.1
3,319,426	-		IAI47_15740	0.63	+0.5
3,319,426	-		IAI47_15740	0.63	+0.4
3,319,426	-		IAI47_15740	0.63	-0.3
3,319,426	-		IAI47_15740	0.63	+0.8
3,319,426	-		IAI47_15740	0.63	+0.1
3,319,426	-		IAI47_15740	0.63	-0.6
3,319,428	+		IAI47_15740	0.63	+0.6
3,319,429	-		IAI47_15740	0.63	+0.1
3,319,429	-		IAI47_15740	0.63	-1.2
3,319,429	-		IAI47_15740	0.63	-1.3
3,319,457	+		IAI47_15740	0.65	+0.9
3,319,468	+		IAI47_15740	0.66	-1.0
3,319,482	+		IAI47_15740	0.68	-0.6
3,319,501	-		IAI47_15740	0.69	+2.5
3,319,501	-		IAI47_15740	0.69	+0.9
3,319,501	-		IAI47_15740	0.69	+1.0
3,319,501	-		IAI47_15740	0.69	-0.1
3,319,501	-		IAI47_15740	0.69	+1.7
3,319,501	-		IAI47_15740	0.69	-0.4
3,319,501	-		IAI47_15740	0.69	-0.1