Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02880

Experiment: PYE_noCalcium 4C survival rep3 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 4C survival rep3 28 days
3,026,036	-		CCNA_02876	0.33	-1.1
3,026,082	+		CCNA_02876	0.44	-1.8
3,026,143	+		CCNA_02876	0.58	+0.8
3,026,151	-		CCNA_02876	0.59	-1.5
3,026,152	+		CCNA_02876	0.60	+0.7
3,026,191	-		CCNA_02876	0.68	-1.1
3,026,191	-		CCNA_02876	0.68	-0.5
3,026,191	-		CCNA_02876	0.68	+2.3
3,026,218	-		CCNA_02876	0.75	+2.3
3,026,241	+		CCNA_02876	0.80	-2.1
3,026,286	-				-2.0
3,026,286	-				-1.0
3,026,288	+				-1.4
3,026,291	-				-1.0
3,026,296	-				-0.3
3,026,296	-				-1.3
3,026,296	-				+5.3
3,026,376	-				+0.0
3,026,376	-				+0.7
3,026,380	-				+0.3
3,026,394	+				+0.8
3,026,417	+				+0.2
3,026,417	+				+1.5
3,026,453	-				+2.3
3,026,473	-				+0.1
3,026,473	-				-0.3
3,026,563	-				-1.5
3,026,594	-		CCNA_02878	0.23	-1.5
3,026,596	-		CCNA_02878	0.25	-3.0
3,026,721	+				+0.3
3,026,731	+				-0.4
3,026,748	+				-0.8
3,026,788	-				-1.0
3,026,827	-		CCNA_02879	0.39	-0.1
3,026,890	-				-1.8
3,026,890	-				-0.4
3,026,908	-				-2.1
3,026,998	+				-1.8
3,027,013	+				+0.7
3,027,022	-				-1.5
3,027,031	-				+1.7
3,027,031	-				-0.3
3,027,054	+				+1.8
3,027,062	-				+0.4
3,027,071	+				+1.3
3,027,071	+				+0.3
3,027,071	+				-1.7
3,027,071	+				-1.6
3,027,071	+				-1.4
3,027,079	-				-3.0
3,027,079	-				-2.0
3,027,079	-				-0.4
3,027,079	-				-0.5
3,027,079	-				+1.2
3,027,079	-				-1.6
3,027,079	-				+0.2
3,027,079	-				-0.4
3,027,079	-				+0.1
3,027,079	-				+0.7
3,027,111	-				+1.3
3,027,128	+				-0.4
3,027,136	-				-2.8
3,027,166	+				-1.0
3,027,166	+				+1.9
3,027,166	+				+0.0
3,027,171	+				-2.4
3,027,173	+				-0.1
3,027,174	-				-1.0
3,027,174	-				+2.6
3,027,174	-				+0.6
3,027,174	-				-0.3
3,027,174	-				+0.7
3,027,195	-		CCNA_02880	0.11	+0.6
3,027,217	-		CCNA_02880	0.12	+1.3
3,027,251	-		CCNA_02880	0.14	-2.5
3,027,271	+		CCNA_02880	0.15	-0.8
3,027,274	-		CCNA_02880	0.15	-2.8
3,027,274	-		CCNA_02880	0.15	-0.1
3,027,274	-		CCNA_02880	0.15	+0.0
3,027,279	-		CCNA_02880	0.15	+0.7
3,027,279	-		CCNA_02880	0.15	-0.3
3,027,279	-		CCNA_02880	0.15	-0.7
3,027,284	-		CCNA_02880	0.16	-2.9
3,027,332	+		CCNA_02880	0.19	-2.6
3,027,340	-		CCNA_02880	0.19	+0.3
3,027,340	-		CCNA_02880	0.19	+2.3
3,027,340	-		CCNA_02880	0.19	-3.3
3,027,351	+		CCNA_02880	0.20	+0.7
3,027,408	+		CCNA_02880	0.23	+0.9
3,027,488	-		CCNA_02880	0.28	+1.1
3,027,502	+		CCNA_02880	0.29	+0.0
3,027,510	-		CCNA_02880	0.29	+0.3
3,027,510	-		CCNA_02880	0.29	+0.6
3,027,510	-		CCNA_02880	0.29	-0.5
3,027,558	+		CCNA_02880	0.32	-2.7
3,027,599	-		CCNA_02880	0.34	+1.9
3,027,622	-		CCNA_02880	0.36	-0.1
3,027,643	-				-0.5
3,027,688	+		CCNA_02880	0.39	-1.5
3,027,688	+		CCNA_02880	0.39	-1.1
3,027,688	+		CCNA_02880	0.39	-2.8
3,027,688	+		CCNA_02880	0.39	+2.3
3,027,688	+		CCNA_02880	0.39	+0.8
3,027,688	+		CCNA_02880	0.39	-0.5
3,027,688	+		CCNA_02880	0.39	+0.6
3,027,688	+		CCNA_02880	0.39	+0.3
3,027,688	+		CCNA_02880	0.39	-1.5
3,027,688	+		CCNA_02880	0.39	-1.6
3,027,696	-		CCNA_02880	0.40	-0.1
3,027,696	-		CCNA_02880	0.40	-2.9
3,027,696	-		CCNA_02880	0.40	-0.1
3,027,696	-		CCNA_02880	0.40	-1.9
3,027,696	-		CCNA_02880	0.40	+0.3
3,027,696	-		CCNA_02880	0.40	-0.3
3,027,699	+		CCNA_02880	0.40	-0.5
3,027,719	+		CCNA_02880	0.41	-2.3
3,027,727	-		CCNA_02880	0.42	-0.2
3,027,727	-				-1.6
3,027,794	-		CCNA_02880	0.46	+0.5
3,027,804	-		CCNA_02880	0.46	+0.7
3,027,830	+		CCNA_02880	0.48	+0.8
3,027,848	-				-0.5
3,027,854	+		CCNA_02880	0.49	+0.2
3,027,854	+		CCNA_02880	0.49	+2.3
3,027,862	-		CCNA_02880	0.50	-2.3
3,027,862	-		CCNA_02880	0.50	+0.8
3,027,878	+		CCNA_02880	0.51	+1.3
3,027,880	+		CCNA_02880	0.51	-1.6
3,027,888	-		CCNA_02880	0.51	-1.4
3,027,909	-		CCNA_02880	0.52	-2.0
3,027,910	-		CCNA_02880	0.52	+0.7
3,027,911	+		CCNA_02880	0.53	-0.2
3,027,917	+		CCNA_02880	0.53	+1.3
3,027,936	-		CCNA_02880	0.54	+0.5
3,027,983	+		CCNA_02880	0.57	+0.3
3,027,991	-		CCNA_02880	0.57	+2.8
3,028,032	+		CCNA_02880	0.60	-1.0
3,028,033	-		CCNA_02880	0.60	-1.2
3,028,037	+		CCNA_02880	0.60	-1.0
3,028,040	-		CCNA_02880	0.60	-0.2
3,028,042	+		CCNA_02880	0.60	-0.8
3,028,043	+		CCNA_02880	0.60	+0.8
3,028,047	+		CCNA_02880	0.61	-1.9
3,028,055	-		CCNA_02880	0.61	-1.9
3,028,063	+		CCNA_02880	0.61	-1.0
3,028,063	+		CCNA_02880	0.61	-0.5
3,028,063	+		CCNA_02880	0.61	-1.0
3,028,071	-				-0.4
3,028,071	-		CCNA_02880	0.62	-1.0
3,028,071	-		CCNA_02880	0.62	-2.8
3,028,097	+		CCNA_02880	0.63	-0.7
3,028,102	+		CCNA_02880	0.64	-2.0
3,028,102	+		CCNA_02880	0.64	+1.3
3,028,110	-		CCNA_02880	0.64	-1.6
3,028,110	-		CCNA_02880	0.64	-0.7
3,028,110	-		CCNA_02880	0.64	-2.4
3,028,110	-		CCNA_02880	0.64	+2.3
3,028,128	+		CCNA_02880	0.65	+0.8
3,028,186	+		CCNA_02880	0.69	+0.0
3,028,194	-		CCNA_02880	0.69	-1.1
3,028,194	-		CCNA_02880	0.69	-0.4
3,028,214	-		CCNA_02880	0.70	-3.8
3,028,241	+		CCNA_02880	0.72	+2.3
3,028,242	-		CCNA_02880	0.72	+0.3
3,028,249	-		CCNA_02880	0.72	-0.0
3,028,249	-		CCNA_02880	0.72	+0.8
3,028,319	+		CCNA_02880	0.76	-1.7
3,028,398	+		CCNA_02880	0.81	-2.4
3,028,434	+		CCNA_02880	0.83	-1.7
3,028,447	-		CCNA_02880	0.84	+1.3
3,028,521	-		CCNA_02880	0.88	+0.0
3,028,537	-		CCNA_02880	0.89	-3.4
3,028,540	+		CCNA_02880	0.89	-1.5
3,028,556	+				-1.7
3,028,585	-				+4.9
3,028,699	-				-1.8
3,028,699	-				-0.7
3,028,705	+				-0.5
3,028,713	-				-1.9
3,028,745	-				+1.6
3,028,787	+				-1.5
3,028,791	+				+0.8
3,028,799	-				+0.5
3,028,816	+				+0.5
3,028,829	+				-1.0
3,028,867	+				+2.0
3,028,899	-				+1.5
3,028,940	-				+0.8
3,029,034	-		CCNA_02881	0.10	+0.8
3,029,042	-		CCNA_02881	0.11	+1.9
3,029,051	-		CCNA_02881	0.11	+0.8
3,029,100	+		CCNA_02881	0.14	-2.4
3,029,147	-		CCNA_02881	0.17	-1.3
3,029,157	-		CCNA_02881	0.18	-2.8
3,029,164	+		CCNA_02881	0.19	-0.2
3,029,191	-		CCNA_02881	0.20	+3.4
3,029,252	-		CCNA_02881	0.24	-3.7
3,029,263	-		CCNA_02881	0.25	-2.0
3,029,278	+		CCNA_02881	0.26	-0.8
3,029,278	+		CCNA_02881	0.26	+2.7
3,029,286	-		CCNA_02881	0.26	-0.8
3,029,288	+		CCNA_02881	0.26	-1.0
3,029,334	+		CCNA_02881	0.29	-0.5
3,029,334	+		CCNA_02881	0.29	-2.4
3,029,455	-		CCNA_02881	0.37	+0.2
3,029,507	-		CCNA_02881	0.40	-0.1
3,029,507	-		CCNA_02881	0.40	+0.4
3,029,534	+		CCNA_02881	0.42	+0.3
3,029,534	+		CCNA_02881	0.42	-1.7
3,029,542	-		CCNA_02881	0.42	+1.4
3,029,546	+		CCNA_02881	0.43	-1.3
3,029,546	+		CCNA_02881	0.43	+0.4
3,029,546	+		CCNA_02881	0.43	-1.4
3,029,579	-		CCNA_02881	0.45	+1.2
3,029,608	+		CCNA_02881	0.47	-0.2
3,029,629	+		CCNA_02881	0.48	-0.5
3,029,629	+		CCNA_02881	0.48	+2.0
3,029,629	+		CCNA_02881	0.48	-1.6
3,029,642	-		CCNA_02881	0.49	-0.7
3,029,642	-		CCNA_02881	0.49	+0.4
3,029,660	+		CCNA_02881	0.50	-2.9
3,029,675	-		CCNA_02881	0.51	+1.3
3,029,683	-		CCNA_02881	0.51	+0.7
3,029,683	-		CCNA_02881	0.51	-2.0
3,029,705	+		CCNA_02881	0.53	-0.1