Experiment: Fusidic 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27455 and BWI76_RS27460 are separated by 112 nucleotides BWI76_RS27460 and BWI76_RS27465 are separated by 108 nucleotides BWI76_RS27465 and BWI76_RS27470 are separated by 109 nucleotides
BWI76_RS27455: BWI76_RS27455 - DUF805 domain-containing protein, at 5,696,752 to 5,697,180
_RS27455
BWI76_RS27460: BWI76_RS27460 - hypothetical protein, at 5,697,293 to 5,697,892
_RS27460
BWI76_RS27465: BWI76_RS27465 - triose-phosphate isomerase, at 5,698,001 to 5,698,768
_RS27465
BWI76_RS27470: BWI76_RS27470 - sodium:sulfate symporter family protein, at 5,698,878 to 5,700,182
_RS27470
Position (kb) 5698
5699 Strain fitness (log2 ratio) -1
0
1 at 5697.030 kb on + strand, within BWI76_RS27455 at 5697.168 kb on + strand at 5697.168 kb on + strand at 5697.176 kb on - strand at 5697.176 kb on - strand at 5697.181 kb on + strand at 5697.360 kb on - strand, within BWI76_RS27460 at 5697.457 kb on + strand, within BWI76_RS27460 at 5697.518 kb on + strand, within BWI76_RS27460 at 5697.518 kb on + strand, within BWI76_RS27460 at 5697.659 kb on + strand, within BWI76_RS27460 at 5697.673 kb on - strand, within BWI76_RS27460 at 5697.864 kb on + strand at 5697.870 kb on - strand at 5697.921 kb on + strand at 5697.921 kb on + strand at 5697.929 kb on + strand at 5697.941 kb on + strand at 5697.943 kb on + strand at 5698.773 kb on + strand at 5698.902 kb on - strand at 5698.954 kb on + strand at 5699.039 kb on + strand, within BWI76_RS27470 at 5699.065 kb on - strand, within BWI76_RS27470 at 5699.121 kb on + strand, within BWI76_RS27470 at 5699.127 kb on - strand, within BWI76_RS27470 at 5699.407 kb on + strand, within BWI76_RS27470 at 5699.425 kb on - strand, within BWI76_RS27470 at 5699.425 kb on - strand, within BWI76_RS27470 at 5699.566 kb on - strand, within BWI76_RS27470 at 5699.568 kb on + strand, within BWI76_RS27470 at 5699.581 kb on + strand, within BWI76_RS27470 at 5699.617 kb on + strand, within BWI76_RS27470
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 1 mg/ml remove 5,697,030 + BWI76_RS27455 0.65 +0.1 5,697,168 + +0.3 5,697,168 + +0.6 5,697,176 - +0.2 5,697,176 - +1.2 5,697,181 + -0.3 5,697,360 - BWI76_RS27460 0.11 -0.1 5,697,457 + BWI76_RS27460 0.27 -0.6 5,697,518 + BWI76_RS27460 0.38 -0.6 5,697,518 + BWI76_RS27460 0.38 -0.6 5,697,659 + BWI76_RS27460 0.61 -0.1 5,697,673 - BWI76_RS27460 0.63 +0.6 5,697,864 + +0.1 5,697,870 - +0.4 5,697,921 + +0.2 5,697,921 + +0.3 5,697,929 + +0.2 5,697,941 + -0.6 5,697,943 + +1.1 5,698,773 + -0.1 5,698,902 - +0.4 5,698,954 + -0.7 5,699,039 + BWI76_RS27470 0.12 +0.2 5,699,065 - BWI76_RS27470 0.14 -1.0 5,699,121 + BWI76_RS27470 0.19 +0.3 5,699,127 - BWI76_RS27470 0.19 -0.7 5,699,407 + BWI76_RS27470 0.41 -0.2 5,699,425 - BWI76_RS27470 0.42 -0.4 5,699,425 - BWI76_RS27470 0.42 +0.3 5,699,566 - BWI76_RS27470 0.53 -0.2 5,699,568 + BWI76_RS27470 0.53 -0.6 5,699,581 + BWI76_RS27470 0.54 +0.7 5,699,617 + BWI76_RS27470 0.57 -0.3
Or see this region's nucleotide sequence