Experiment: Fusidic 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25555 and BWI76_RS25560 are separated by 138 nucleotides BWI76_RS25560 and BWI76_RS25565 are separated by 328 nucleotides
BWI76_RS25555: BWI76_RS25555 - 50S ribosomal protein L11 methyltransferase, at 5,310,698 to 5,311,579
_RS25555
BWI76_RS25560: BWI76_RS25560 - carbonic anhydrase, at 5,311,718 to 5,312,458
_RS25560
BWI76_RS25565: BWI76_RS25565 - tRNA dihydrouridine synthase DusB, at 5,312,787 to 5,313,752
_RS25565
Position (kb) 5311
5312
5313 Strain fitness (log2 ratio) -1
0
1
2 at 5311.003 kb on + strand, within BWI76_RS25555 at 5311.285 kb on - strand, within BWI76_RS25555 at 5311.339 kb on + strand, within BWI76_RS25555 at 5311.469 kb on + strand, within BWI76_RS25555 at 5311.541 kb on + strand at 5311.669 kb on + strand at 5311.669 kb on + strand at 5311.670 kb on - strand at 5311.677 kb on - strand at 5311.706 kb on - strand at 5311.751 kb on + strand at 5311.821 kb on + strand, within BWI76_RS25560 at 5311.843 kb on + strand, within BWI76_RS25560 at 5311.958 kb on + strand, within BWI76_RS25560 at 5312.114 kb on - strand, within BWI76_RS25560 at 5312.162 kb on - strand, within BWI76_RS25560 at 5312.205 kb on + strand, within BWI76_RS25560 at 5312.273 kb on + strand, within BWI76_RS25560 at 5312.308 kb on - strand, within BWI76_RS25560 at 5312.322 kb on - strand, within BWI76_RS25560 at 5312.327 kb on - strand, within BWI76_RS25560 at 5312.362 kb on - strand, within BWI76_RS25560 at 5312.372 kb on - strand, within BWI76_RS25560 at 5312.718 kb on + strand at 5313.230 kb on + strand, within BWI76_RS25565
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 1 mg/ml remove 5,311,003 + BWI76_RS25555 0.35 -0.4 5,311,285 - BWI76_RS25555 0.67 -0.1 5,311,339 + BWI76_RS25555 0.73 +0.5 5,311,469 + BWI76_RS25555 0.87 +0.0 5,311,541 + +0.3 5,311,669 + +0.8 5,311,669 + -0.9 5,311,670 - -1.5 5,311,677 - -0.2 5,311,706 - -1.1 5,311,751 + +0.1 5,311,821 + BWI76_RS25560 0.14 +0.9 5,311,843 + BWI76_RS25560 0.17 +0.7 5,311,958 + BWI76_RS25560 0.32 -0.3 5,312,114 - BWI76_RS25560 0.53 +0.1 5,312,162 - BWI76_RS25560 0.60 +0.5 5,312,205 + BWI76_RS25560 0.66 -0.2 5,312,273 + BWI76_RS25560 0.75 +0.4 5,312,308 - BWI76_RS25560 0.80 +2.1 5,312,322 - BWI76_RS25560 0.82 +0.2 5,312,327 - BWI76_RS25560 0.82 +0.1 5,312,362 - BWI76_RS25560 0.87 -1.2 5,312,372 - BWI76_RS25560 0.88 +0.2 5,312,718 + +0.5 5,313,230 + BWI76_RS25565 0.46 +0.2
Or see this region's nucleotide sequence