Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20460

Experiment: Fusidic 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS20455 and BWI76_RS20460 overlap by 1 nucleotidesBWI76_RS20460 and BWI76_RS20465 are separated by 160 nucleotidesBWI76_RS20465 and BWI76_RS20470 are separated by 372 nucleotides BWI76_RS20455: BWI76_RS20455 - multifunctional fatty acid oxidation complex subunit alpha, at 4,280,816 to 4,282,960 _RS20455 BWI76_RS20460: BWI76_RS20460 - acetyl-CoA C-acyltransferase FadI, at 4,282,960 to 4,284,270 _RS20460 BWI76_RS20465: BWI76_RS20465 - hypothetical protein, at 4,284,431 to 4,284,715 _RS20465 BWI76_RS20470: BWI76_RS20470 - long-chain fatty acid transporter, at 4,285,088 to 4,286,452 _RS20470 Position (kb) 4282 4283 4284 4285Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 4282.004 kb on + strand, within BWI76_RS20455at 4282.380 kb on + strand, within BWI76_RS20455at 4282.432 kb on - strand, within BWI76_RS20455at 4282.593 kb on - strand, within BWI76_RS20455at 4282.606 kb on + strand, within BWI76_RS20455at 4282.619 kb on + strand, within BWI76_RS20455at 4282.815 kb on - strandat 4282.911 kb on + strandat 4282.977 kb on - strandat 4282.998 kb on - strandat 4283.206 kb on + strand, within BWI76_RS20460at 4283.214 kb on - strand, within BWI76_RS20460at 4283.625 kb on - strand, within BWI76_RS20460at 4283.648 kb on - strandat 4283.796 kb on + strand, within BWI76_RS20460at 4283.897 kb on - strand, within BWI76_RS20460at 4284.142 kb on + strandat 4284.172 kb on + strandat 4284.220 kb on - strandat 4284.263 kb on - strandat 4284.280 kb on + strandat 4284.401 kb on - strandat 4284.496 kb on + strand, within BWI76_RS20465at 4284.509 kb on + strand, within BWI76_RS20465at 4284.525 kb on - strand, within BWI76_RS20465at 4284.532 kb on - strandat 4284.675 kb on - strand, within BWI76_RS20465at 4284.694 kb on + strandat 4284.704 kb on + strandat 4284.704 kb on + strandat 4284.965 kb on + strandat 4284.978 kb on - strandat 4284.980 kb on - strandat 4284.997 kb on - strandat 4285.024 kb on - strandat 4285.156 kb on - strandat 4285.156 kb on - strandat 4285.161 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fusidic 1 mg/ml
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4,282,004 + BWI76_RS20455 0.55 -0.8
4,282,380 + BWI76_RS20455 0.73 -0.2
4,282,432 - BWI76_RS20455 0.75 -2.6
4,282,593 - BWI76_RS20455 0.83 -0.2
4,282,606 + BWI76_RS20455 0.83 -0.4
4,282,619 + BWI76_RS20455 0.84 +0.2
4,282,815 - +1.9
4,282,911 + +0.4
4,282,977 - +4.4
4,282,998 - -1.5
4,283,206 + BWI76_RS20460 0.19 +1.0
4,283,214 - BWI76_RS20460 0.19 -0.4
4,283,625 - BWI76_RS20460 0.51 -1.0
4,283,648 - +0.4
4,283,796 + BWI76_RS20460 0.64 +1.4
4,283,897 - BWI76_RS20460 0.71 -0.7
4,284,142 + -0.1
4,284,172 + -1.0
4,284,220 - -0.6
4,284,263 - -0.2
4,284,280 + +0.4
4,284,401 - -0.9
4,284,496 + BWI76_RS20465 0.23 +0.1
4,284,509 + BWI76_RS20465 0.27 -0.1
4,284,525 - BWI76_RS20465 0.33 -0.5
4,284,532 - +0.6
4,284,675 - BWI76_RS20465 0.86 +0.4
4,284,694 + +0.9
4,284,704 + -0.3
4,284,704 + +0.6
4,284,965 + +0.2
4,284,978 - +0.6
4,284,980 - -0.1
4,284,997 - +0.0
4,285,024 - -0.3
4,285,156 - +1.7
4,285,156 - -0.1
4,285,161 - +0.8

Or see this region's nucleotide sequence