Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17520
Experiment: Fusidic 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,632,876 | - | BWI76_RS17515 | 0.32 | -0.1 | |
3,633,047 | - | BWI76_RS17515 | 0.44 | +0.3 | |
3,633,173 | - | -1.1 | |||
3,633,284 | + | BWI76_RS17515 | 0.61 | -0.2 | |
3,633,354 | + | BWI76_RS17515 | 0.66 | +0.8 | |
3,633,904 | + | +0.1 | |||
3,633,904 | + | +0.2 | |||
3,634,180 | - | BWI76_RS17520 | 0.36 | -1.9 | |
3,634,396 | - | BWI76_RS17520 | 0.59 | -0.8 | |
3,634,433 | + | BWI76_RS17520 | 0.63 | -0.4 | |
3,634,472 | + | BWI76_RS17520 | 0.68 | -0.2 | |
3,634,782 | - | +0.1 | |||
3,635,433 | - | BWI76_RS17525 | 0.73 | -1.0 | |
3,635,549 | + | BWI76_RS17525 | 0.87 | -0.7 | |
3,635,563 | + | -0.2 | |||
3,635,571 | - | +0.5 | |||
3,635,582 | + | -0.6 | |||
3,635,590 | - | -1.1 | |||
3,635,603 | + | -1.0 | |||
3,635,613 | - | +0.2 | |||
3,635,615 | + | +1.0 | |||
3,635,623 | - | +0.5 | |||
3,635,623 | - | +0.2 | |||
3,635,623 | - | -0.5 | |||
3,635,623 | - | +0.1 | |||
3,635,631 | - | +0.7 | |||
3,635,670 | - | BWI76_RS17530 | 0.29 | -1.3 | |
3,635,671 | - | BWI76_RS17530 | 0.29 | +0.0 | |
3,635,685 | + | BWI76_RS17530 | 0.33 | +0.9 | |
3,635,765 | + | BWI76_RS17530 | 0.54 | -1.8 |
Or see this region's nucleotide sequence