Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16115
Experiment: Fusidic 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,342,538 | + | BWI76_RS16110 | 0.38 | +0.1 | |
3,342,582 | - | BWI76_RS16110 | 0.41 | +0.5 | |
3,342,592 | - | BWI76_RS16110 | 0.42 | -0.5 | |
3,342,643 | + | BWI76_RS16110 | 0.45 | -1.3 | |
3,343,663 | - | -0.2 | |||
3,343,663 | - | -0.0 | |||
3,343,929 | + | BWI76_RS16115 | 0.25 | +0.3 | |
3,344,316 | - | BWI76_RS16115 | 0.48 | +0.6 | |
3,344,316 | - | BWI76_RS16115 | 0.48 | -1.5 | |
3,344,603 | + | BWI76_RS16115 | 0.65 | -0.9 | |
3,344,637 | + | BWI76_RS16115 | 0.68 | -1.7 | |
3,344,689 | - | BWI76_RS16115 | 0.71 | -0.8 | |
3,344,746 | - | BWI76_RS16115 | 0.74 | -0.9 | |
3,345,032 | + | -0.0 | |||
3,345,032 | + | -0.4 | |||
3,345,228 | + | -1.7 | |||
3,345,392 | - | BWI76_RS16120 | 0.35 | +0.7 | |
3,345,440 | + | BWI76_RS16120 | 0.47 | -0.3 | |
3,345,585 | + | BWI76_RS16120 | 0.85 | -0.8 | |
3,345,593 | - | BWI76_RS16120 | 0.87 | +0.4 | |
3,345,654 | + | -1.1 | |||
3,345,903 | + | BWI76_RS16125 | 0.35 | +0.6 |
Or see this region's nucleotide sequence