Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04200

Experiment: Fusidic 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS04190 and BWI76_RS04195 overlap by 20 nucleotidesBWI76_RS04195 and BWI76_RS04200 are separated by 114 nucleotidesBWI76_RS04200 and BWI76_RS04205 overlap by 4 nucleotides BWI76_RS04190: BWI76_RS04190 - Trp operon repressor, at 863,384 to 863,716 _RS04190 BWI76_RS04195: BWI76_RS04195 - non-canonical purine NTP phosphatase, at 863,697 to 864,218 _RS04195 BWI76_RS04200: BWI76_RS04200 - phosphoglycerate mutase GpmB, at 864,333 to 864,980 _RS04200 BWI76_RS04205: BWI76_RS04205 - right oriC-binding transcriptional activator, at 864,977 to 865,846 _RS04205 Position (kb) 864 865Strain fitness (log2 ratio) -1 0 1 2 3at 864.304 kb on + strandat 864.305 kb on - strandat 864.313 kb on - strandat 864.581 kb on + strand, within BWI76_RS04200at 864.589 kb on - strand, within BWI76_RS04200at 864.892 kb on + strand, within BWI76_RS04200at 865.206 kb on + strand, within BWI76_RS04205at 865.409 kb on + strand, within BWI76_RS04205at 865.410 kb on + strand, within BWI76_RS04205at 865.416 kb on - strand, within BWI76_RS04205at 865.420 kb on + strand, within BWI76_RS04205at 865.435 kb on + strand, within BWI76_RS04205at 865.538 kb on + strand, within BWI76_RS04205at 865.551 kb on - strand, within BWI76_RS04205at 865.653 kb on - strand, within BWI76_RS04205at 865.759 kb on - strand, within BWI76_RS04205at 865.767 kb on + strandat 865.800 kb on + strandat 865.809 kb on + strandat 865.811 kb on + strandat 865.811 kb on + strandat 865.811 kb on + strandat 865.811 kb on + strandat 865.811 kb on + strandat 865.811 kb on + strandat 865.811 kb on + strandat 865.819 kb on - strandat 865.819 kb on - strandat 865.819 kb on - strandat 865.819 kb on - strandat 865.819 kb on - strandat 865.859 kb on + strandat 865.859 kb on + strandat 865.859 kb on + strandat 865.866 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fusidic 1 mg/ml
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864,304 + +0.3
864,305 - -0.2
864,313 - +1.0
864,581 + BWI76_RS04200 0.38 +0.2
864,589 - BWI76_RS04200 0.40 -0.1
864,892 + BWI76_RS04200 0.86 -0.0
865,206 + BWI76_RS04205 0.26 -0.0
865,409 + BWI76_RS04205 0.50 +0.2
865,410 + BWI76_RS04205 0.50 +0.3
865,416 - BWI76_RS04205 0.50 -0.1
865,420 + BWI76_RS04205 0.51 -0.7
865,435 + BWI76_RS04205 0.53 -0.2
865,538 + BWI76_RS04205 0.64 -0.2
865,551 - BWI76_RS04205 0.66 +2.9
865,653 - BWI76_RS04205 0.78 -0.3
865,759 - BWI76_RS04205 0.90 -0.2
865,767 + -0.3
865,800 + -0.5
865,809 + -1.7
865,811 + +0.3
865,811 + -0.4
865,811 + +1.3
865,811 + -0.2
865,811 + -0.6
865,811 + -0.1
865,811 + -0.8
865,819 - +0.4
865,819 - +0.1
865,819 - +1.4
865,819 - +0.8
865,819 - +0.7
865,859 + -0.3
865,859 + -0.2
865,859 + -0.4
865,866 + -1.4

Or see this region's nucleotide sequence