Experiment: Chloride 600 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_753 and Pf6N2E2_754 are separated by 57 nucleotides Pf6N2E2_754 and Pf6N2E2_755 are separated by 24 nucleotides Pf6N2E2_755 and Pf6N2E2_756 are separated by 373 nucleotides Pf6N2E2_756 and Pf6N2E2_757 are separated by 274 nucleotides
Pf6N2E2_753 - AFG1-like ATPase, at 862,701 to 863,822
_753
Pf6N2E2_754 - Histone acetyltransferase HPA2 and related acetyltransferases, at 863,880 to 864,374
_754
Pf6N2E2_755 - UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide, at 864,399 to 866,138
_755
Pf6N2E2_756 - hypothetical protein, at 866,512 to 866,685
_756
Pf6N2E2_757 - 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44), at 866,960 to 867,940
_757
Position (kb) 864
865
866
867 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 863.679 kb on + strand, within Pf6N2E2_753 at 863.679 kb on + strand, within Pf6N2E2_753 at 863.679 kb on + strand, within Pf6N2E2_753 at 863.680 kb on - strand, within Pf6N2E2_753 at 863.680 kb on - strand, within Pf6N2E2_753 at 863.733 kb on + strand at 863.733 kb on + strand at 863.733 kb on + strand at 863.734 kb on - strand at 863.734 kb on - strand at 863.734 kb on - strand at 863.734 kb on - strand at 863.745 kb on + strand at 863.828 kb on - strand at 863.905 kb on + strand at 863.905 kb on + strand at 863.905 kb on + strand at 863.919 kb on + strand at 863.919 kb on + strand at 863.919 kb on + strand at 864.297 kb on + strand, within Pf6N2E2_754 at 864.297 kb on + strand, within Pf6N2E2_754 at 864.348 kb on - strand at 864.604 kb on + strand, within Pf6N2E2_755 at 864.688 kb on + strand, within Pf6N2E2_755 at 864.688 kb on + strand, within Pf6N2E2_755 at 864.688 kb on + strand, within Pf6N2E2_755 at 864.688 kb on + strand, within Pf6N2E2_755 at 864.689 kb on - strand, within Pf6N2E2_755 at 864.689 kb on - strand, within Pf6N2E2_755 at 864.689 kb on - strand, within Pf6N2E2_755 at 864.776 kb on - strand, within Pf6N2E2_755 at 864.776 kb on - strand, within Pf6N2E2_755 at 864.776 kb on - strand, within Pf6N2E2_755 at 864.776 kb on - strand, within Pf6N2E2_755 at 864.776 kb on - strand, within Pf6N2E2_755 at 864.844 kb on + strand, within Pf6N2E2_755 at 864.844 kb on + strand, within Pf6N2E2_755 at 864.845 kb on - strand, within Pf6N2E2_755 at 864.862 kb on + strand at 864.862 kb on + strand, within Pf6N2E2_755 at 864.862 kb on + strand, within Pf6N2E2_755 at 864.872 kb on - strand, within Pf6N2E2_755 at 864.872 kb on - strand, within Pf6N2E2_755 at 864.907 kb on - strand, within Pf6N2E2_755 at 864.958 kb on + strand, within Pf6N2E2_755 at 864.958 kb on + strand, within Pf6N2E2_755 at 864.959 kb on - strand, within Pf6N2E2_755 at 864.965 kb on + strand, within Pf6N2E2_755 at 864.965 kb on + strand, within Pf6N2E2_755 at 864.966 kb on - strand, within Pf6N2E2_755 at 864.966 kb on - strand, within Pf6N2E2_755 at 864.966 kb on - strand, within Pf6N2E2_755 at 865.090 kb on + strand, within Pf6N2E2_755 at 865.090 kb on + strand, within Pf6N2E2_755 at 865.090 kb on + strand, within Pf6N2E2_755 at 865.090 kb on + strand, within Pf6N2E2_755 at 865.091 kb on - strand, within Pf6N2E2_755 at 865.091 kb on - strand, within Pf6N2E2_755 at 865.180 kb on + strand, within Pf6N2E2_755 at 865.225 kb on + strand, within Pf6N2E2_755 at 865.226 kb on - strand, within Pf6N2E2_755 at 865.285 kb on + strand, within Pf6N2E2_755 at 865.372 kb on + strand, within Pf6N2E2_755 at 865.373 kb on - strand, within Pf6N2E2_755 at 865.522 kb on + strand, within Pf6N2E2_755 at 865.777 kb on + strand, within Pf6N2E2_755 at 865.777 kb on + strand, within Pf6N2E2_755 at 865.778 kb on - strand, within Pf6N2E2_755 at 865.778 kb on - strand, within Pf6N2E2_755 at 865.778 kb on - strand, within Pf6N2E2_755 at 865.778 kb on - strand, within Pf6N2E2_755 at 865.790 kb on - strand, within Pf6N2E2_755 at 865.859 kb on - strand, within Pf6N2E2_755 at 865.870 kb on + strand, within Pf6N2E2_755 at 865.871 kb on - strand, within Pf6N2E2_755 at 866.057 kb on - strand at 866.211 kb on + strand at 866.211 kb on + strand at 866.211 kb on + strand at 866.224 kb on + strand at 866.224 kb on + strand at 866.224 kb on + strand at 866.224 kb on + strand at 866.225 kb on - strand at 866.228 kb on - strand at 866.420 kb on + strand at 866.421 kb on - strand at 866.421 kb on - strand at 866.453 kb on + strand at 866.453 kb on + strand at 866.454 kb on - strand at 866.454 kb on - strand at 866.593 kb on + strand, within Pf6N2E2_756 at 866.593 kb on + strand, within Pf6N2E2_756 at 866.594 kb on - strand, within Pf6N2E2_756 at 866.594 kb on - strand, within Pf6N2E2_756 at 866.615 kb on - strand, within Pf6N2E2_756 at 866.645 kb on + strand, within Pf6N2E2_756 at 866.646 kb on - strand, within Pf6N2E2_756 at 866.646 kb on - strand, within Pf6N2E2_756 at 866.646 kb on - strand, within Pf6N2E2_756 at 866.646 kb on - strand, within Pf6N2E2_756 at 866.706 kb on + strand at 866.706 kb on + strand at 866.707 kb on - strand at 866.715 kb on + strand at 866.715 kb on + strand at 866.715 kb on + strand at 866.715 kb on + strand at 866.715 kb on + strand at 866.715 kb on + strand at 866.716 kb on - strand at 866.716 kb on - strand at 866.716 kb on - strand at 866.717 kb on + strand at 866.717 kb on + strand at 866.717 kb on + strand at 866.717 kb on + strand at 866.718 kb on - strand at 866.718 kb on - strand at 866.718 kb on - strand at 866.718 kb on - strand at 866.718 kb on - strand at 866.733 kb on - strand at 866.733 kb on - strand at 866.749 kb on + strand at 866.750 kb on - strand at 866.753 kb on - strand at 866.863 kb on - strand at 866.873 kb on + strand at 866.873 kb on + strand at 866.874 kb on - strand at 866.910 kb on - strand at 866.917 kb on - strand at 866.929 kb on + strand at 866.929 kb on + strand at 866.930 kb on - strand at 866.935 kb on + strand at 866.935 kb on + strand at 866.935 kb on + strand at 866.935 kb on + strand at 866.936 kb on - strand at 866.936 kb on - strand at 866.941 kb on + strand at 866.944 kb on + strand at 866.945 kb on - strand at 867.044 kb on + strand at 867.045 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 600 mM remove 863,679 + Pf6N2E2_753 0.87 -0.2 863,679 + Pf6N2E2_753 0.87 -2.1 863,679 + Pf6N2E2_753 0.87 -0.2 863,680 - Pf6N2E2_753 0.87 +2.2 863,680 - Pf6N2E2_753 0.87 +0.3 863,733 + +1.2 863,733 + -0.2 863,733 + +1.2 863,734 - -1.6 863,734 - +2.8 863,734 - +0.2 863,734 - -0.7 863,745 + -2.6 863,828 - -1.8 863,905 + -1.3 863,905 + -0.1 863,905 + +0.9 863,919 + +0.8 863,919 + -0.9 863,919 + +0.2 864,297 + Pf6N2E2_754 0.84 +0.5 864,297 + Pf6N2E2_754 0.84 -1.1 864,348 - -1.0 864,604 + Pf6N2E2_755 0.12 -0.8 864,688 + Pf6N2E2_755 0.17 +0.5 864,688 + Pf6N2E2_755 0.17 -0.7 864,688 + Pf6N2E2_755 0.17 +0.7 864,688 + Pf6N2E2_755 0.17 -0.8 864,689 - Pf6N2E2_755 0.17 +0.2 864,689 - Pf6N2E2_755 0.17 -0.2 864,689 - Pf6N2E2_755 0.17 -0.5 864,776 - Pf6N2E2_755 0.22 +0.9 864,776 - Pf6N2E2_755 0.22 -2.5 864,776 - Pf6N2E2_755 0.22 -0.9 864,776 - Pf6N2E2_755 0.22 +1.7 864,776 - Pf6N2E2_755 0.22 +0.7 864,844 + Pf6N2E2_755 0.26 +0.3 864,844 + Pf6N2E2_755 0.26 -2.6 864,845 - Pf6N2E2_755 0.26 +0.2 864,862 + +0.2 864,862 + Pf6N2E2_755 0.27 +1.5 864,862 + Pf6N2E2_755 0.27 +0.4 864,872 - Pf6N2E2_755 0.27 +0.9 864,872 - Pf6N2E2_755 0.27 -0.5 864,907 - Pf6N2E2_755 0.29 +0.6 864,958 + Pf6N2E2_755 0.32 +0.6 864,958 + Pf6N2E2_755 0.32 +1.7 864,959 - Pf6N2E2_755 0.32 +0.3 864,965 + Pf6N2E2_755 0.33 -2.7 864,965 + Pf6N2E2_755 0.33 +0.4 864,966 - Pf6N2E2_755 0.33 +0.0 864,966 - Pf6N2E2_755 0.33 +2.0 864,966 - Pf6N2E2_755 0.33 +0.5 865,090 + Pf6N2E2_755 0.40 +0.4 865,090 + Pf6N2E2_755 0.40 +1.1 865,090 + Pf6N2E2_755 0.40 +0.2 865,090 + Pf6N2E2_755 0.40 +1.2 865,091 - Pf6N2E2_755 0.40 -1.6 865,091 - Pf6N2E2_755 0.40 -1.3 865,180 + Pf6N2E2_755 0.45 +0.4 865,225 + Pf6N2E2_755 0.47 -1.4 865,226 - Pf6N2E2_755 0.48 +1.7 865,285 + Pf6N2E2_755 0.51 -0.3 865,372 + Pf6N2E2_755 0.56 +0.4 865,373 - Pf6N2E2_755 0.56 -1.0 865,522 + Pf6N2E2_755 0.65 +0.3 865,777 + Pf6N2E2_755 0.79 -0.7 865,777 + Pf6N2E2_755 0.79 -1.0 865,778 - Pf6N2E2_755 0.79 +0.6 865,778 - Pf6N2E2_755 0.79 -0.3 865,778 - Pf6N2E2_755 0.79 +1.4 865,778 - Pf6N2E2_755 0.79 -2.0 865,790 - Pf6N2E2_755 0.80 -0.8 865,859 - Pf6N2E2_755 0.84 +0.7 865,870 + Pf6N2E2_755 0.85 +0.9 865,871 - Pf6N2E2_755 0.85 +2.8 866,057 - -1.1 866,211 + +0.5 866,211 + -1.3 866,211 + -0.4 866,224 + -1.7 866,224 + +0.7 866,224 + +0.2 866,224 + +0.5 866,225 - +2.2 866,228 - -0.9 866,420 + -1.0 866,421 - -0.8 866,421 - +1.2 866,453 + -2.5 866,453 + +1.4 866,454 - -1.2 866,454 - +0.6 866,593 + Pf6N2E2_756 0.47 +1.2 866,593 + Pf6N2E2_756 0.47 -0.2 866,594 - Pf6N2E2_756 0.47 -2.6 866,594 - Pf6N2E2_756 0.47 -0.5 866,615 - Pf6N2E2_756 0.59 -1.0 866,645 + Pf6N2E2_756 0.76 -0.8 866,646 - Pf6N2E2_756 0.77 -0.1 866,646 - Pf6N2E2_756 0.77 +1.0 866,646 - Pf6N2E2_756 0.77 -0.9 866,646 - Pf6N2E2_756 0.77 +0.3 866,706 + -0.9 866,706 + -2.1 866,707 - +0.4 866,715 + +0.6 866,715 + -0.5 866,715 + -1.4 866,715 + -0.8 866,715 + -1.2 866,715 + -0.3 866,716 - +1.2 866,716 - -0.8 866,716 - +0.7 866,717 + +0.9 866,717 + +0.9 866,717 + +1.5 866,717 + -2.4 866,718 - +1.0 866,718 - +1.2 866,718 - +1.2 866,718 - +0.4 866,718 - -0.4 866,733 - -0.6 866,733 - -0.4 866,749 + +1.9 866,750 - +0.2 866,753 - -0.2 866,863 - -0.7 866,873 + +1.1 866,873 + -0.0 866,874 - +0.1 866,910 - +1.4 866,917 - +2.1 866,929 + -2.3 866,929 + -3.0 866,930 - +2.3 866,935 + -1.3 866,935 + -2.4 866,935 + +0.4 866,935 + +0.2 866,936 - +0.7 866,936 - +0.2 866,941 + +0.1 866,944 + -1.8 866,945 - -0.3 867,044 + +0.9 867,045 - -0.9
Or see this region's nucleotide sequence