Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00520

Experiment: Anaerobic, acetate donor; nitrate electron acceptor

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, acetate donor; nitrate electron acceptor
108,114	-		LRK54_RS00510	0.76	-0.1
108,227	+				+0.9
108,227	+				-0.0
108,227	+				-0.3
108,228	-				+0.5
108,228	-				-0.4
108,228	-				-0.0
108,254	+				+0.3
108,277	+				-0.2
108,277	+				-1.0
108,277	+				+0.7
108,277	+				+0.3
108,277	+				-0.1
108,277	+				+1.8
108,277	+				+0.6
108,277	+				-0.2
108,277	+				+0.4
108,277	+				+1.0
108,277	+				+0.4
108,278	-				-0.5
108,278	-				+0.3
108,278	-				-1.4
108,278	-				-0.6
108,278	-				+1.0
108,278	-				+0.6
108,278	-				-2.5
108,278	-				-0.2
108,278	-				-0.3
108,278	-				-0.6
108,278	-				-0.1
108,278	-				+0.6
108,278	-				-0.2
108,278	-				-0.7
108,278	-				-1.7
108,278	-				-0.6
108,392	+		LRK54_RS00515	0.14	-0.6
108,392	+		LRK54_RS00515	0.14	-1.0
108,392	+		LRK54_RS00515	0.14	-0.4
108,392	+		LRK54_RS00515	0.14	-1.0
108,392	+		LRK54_RS00515	0.14	-0.8
108,393	-		LRK54_RS00515	0.14	-0.3
108,393	-		LRK54_RS00515	0.14	-0.7
108,398	+		LRK54_RS00515	0.15	-1.2
108,398	+		LRK54_RS00515	0.15	-1.7
108,398	+		LRK54_RS00515	0.15	+0.5
108,398	+		LRK54_RS00515	0.15	-1.0
108,398	+		LRK54_RS00515	0.15	+0.3
108,398	+		LRK54_RS00515	0.15	-0.3
108,398	+		LRK54_RS00515	0.15	+1.4
108,398	+		LRK54_RS00515	0.15	-0.3
108,398	+		LRK54_RS00515	0.15	-0.8
108,398	+		LRK54_RS00515	0.15	+0.1
108,398	+		LRK54_RS00515	0.15	-2.7
108,398	+		LRK54_RS00515	0.15	+0.6
108,398	+		LRK54_RS00515	0.15	-1.7
108,398	+		LRK54_RS00515	0.15	+0.5
108,399	-		LRK54_RS00515	0.16	-0.5
108,399	-		LRK54_RS00515	0.16	+0.6
108,399	-		LRK54_RS00515	0.16	-0.0
108,399	-		LRK54_RS00515	0.16	-0.4
108,399	-		LRK54_RS00515	0.16	+0.7
108,399	-		LRK54_RS00515	0.16	-0.4
108,399	-		LRK54_RS00515	0.16	-1.0
108,399	-		LRK54_RS00515	0.16	-0.5
108,399	-		LRK54_RS00515	0.16	-0.0
108,399	-		LRK54_RS00515	0.16	+0.4
108,399	-		LRK54_RS00515	0.16	+1.2
108,399	-		LRK54_RS00515	0.16	+1.1
108,497	+		LRK54_RS00515	0.39	-0.7
108,497	+		LRK54_RS00515	0.39	-0.9
108,497	+		LRK54_RS00515	0.39	-0.7
108,497	+		LRK54_RS00515	0.39	+0.3
108,497	+		LRK54_RS00515	0.39	+0.7
108,498	-		LRK54_RS00515	0.39	-0.8
108,498	-		LRK54_RS00515	0.39	+0.7
108,498	-		LRK54_RS00515	0.39	-0.6
108,498	-		LRK54_RS00515	0.39	-0.3
108,610	-		LRK54_RS00515	0.66	-0.2
108,680	+		LRK54_RS00515	0.83	+0.1
108,680	+		LRK54_RS00515	0.83	-1.7
108,680	+		LRK54_RS00515	0.83	-0.9
108,680	+		LRK54_RS00515	0.83	+1.0
108,680	+		LRK54_RS00515	0.83	+0.2
108,680	+		LRK54_RS00515	0.83	-1.1
108,680	+		LRK54_RS00515	0.83	-0.6
108,680	+		LRK54_RS00515	0.83	-1.7
108,681	-		LRK54_RS00515	0.83	-2.3
108,681	-		LRK54_RS00515	0.83	-0.3
108,681	-		LRK54_RS00515	0.83	+1.6
108,681	-		LRK54_RS00515	0.83	+2.0
108,681	-		LRK54_RS00515	0.83	-0.7
108,681	-		LRK54_RS00515	0.83	-1.3
108,681	-		LRK54_RS00515	0.83	+0.2
108,681	-		LRK54_RS00515	0.83	+0.3
108,681	-		LRK54_RS00515	0.83	-2.0
108,681	-		LRK54_RS00515	0.83	-0.4
108,681	-		LRK54_RS00515	0.83	+0.4
108,772	+				-1.6
108,772	+				-0.6
108,772	+				-0.1
108,772	+				+1.3
108,772	+				-0.5
108,772	+				-0.6
108,772	+				-0.5
108,772	+				-0.4
108,773	-				-1.5
108,773	-				-1.3
108,773	-				-0.7
108,773	-				+0.7
108,773	-				+0.1
108,773	-				-0.3
108,773	-				-0.7
108,776	+				-1.0
108,777	-				+0.1
108,786	+				-2.0
108,786	+				-0.0
108,787	-				-1.0
108,787	-				-1.0
108,787	-				+0.2
108,856	+				-0.3
108,856	+				-1.0
108,856	+				-2.0
108,856	+				-0.4
108,856	+				+0.5
108,856	+				+1.1
108,856	+				-2.6
108,856	+				+1.0
108,856	+				+0.4
108,856	+				+0.6
108,856	+				+0.4
108,856	+				-0.0
108,856	+				+0.6
108,856	+				+0.5
108,856	+				-0.4
108,856	+				-0.0
108,856	+				-0.2
108,856	+				-2.2
108,856	+				-1.8
108,856	+				+0.4
108,856	+				-0.8
108,856	+				+0.5
108,857	-				-2.0
108,857	-				-1.1
108,857	-				+0.1
108,857	-				-1.7
108,857	-				+1.0
108,857	-				+0.4
108,857	-				-0.6
108,857	-				+0.5
108,857	-				+0.6
108,857	-				-2.3
108,857	-				+0.7
108,857	-				+0.6
108,857	-				-0.5
108,857	-				-2.3
108,857	-				+0.4
108,857	-				-1.6
108,857	-				-1.6
108,857	-				-0.0
108,857	-				-0.0
108,857	-				+1.0
108,857	-				-0.4
108,857	-				-1.8
108,857	-				+0.4
108,857	-				+0.5
108,857	-				-0.4
108,857	-				+0.8
108,857	-				-0.6
108,858	+				+0.4
108,858	+				+3.8
108,858	+				-0.2
108,858	+				-1.0
108,858	+				+0.5
108,858	+				-0.5
108,858	+				-0.0
108,858	+				-0.4
108,859	-				-1.2
108,859	-				-1.2
108,859	-				-1.0
108,859	-				-0.1
108,859	-				-1.6
108,859	-				-1.0
108,871	-				+1.6
108,957	+				-0.6
108,957	+				-0.1
108,957	+				+1.0
108,957	+				-0.0
108,957	+				-0.2
108,957	+				+1.0
108,957	+				-0.0
108,957	+				-0.1
108,957	+				-0.3
108,957	+				+0.3
108,957	+				+0.6
108,958	-				-0.9
108,958	-				+0.7
108,958	-				-0.7
108,958	-				-0.1
108,958	-				-0.9
108,958	-				+1.8
108,958	-				+0.3
108,958	-				+2.0
108,958	-				-1.3
108,958	-				-1.1
109,382	+				-0.0
109,382	+				+0.2
109,382	+				+0.4
109,382	+				+0.6
109,382	+				-1.6
109,382	+				-2.8
109,382	+				+0.3
109,382	+				-1.3
109,382	+				-0.5
109,382	+				-0.6
109,383	-				+1.6
109,383	-				+1.0
109,383	-				-0.8
109,383	-				-0.9
109,383	-				-0.0
109,383	-				-0.3
109,383	-				-1.0
109,385	+				-0.3
109,385	+				-1.6
109,385	+				-1.7
109,385	+				-0.5
109,386	-				-2.1
109,386	-				-0.6
109,386	-				-0.6
109,386	-				-0.6
109,386	-				-0.1
109,386	-				-1.0
109,442	+		LRK54_RS00520	0.12	+0.2
109,442	+		LRK54_RS00520	0.12	-0.9
109,442	+		LRK54_RS00520	0.12	-1.0
109,442	+		LRK54_RS00520	0.12	-1.5
109,442	+		LRK54_RS00520	0.12	-1.0
109,442	+		LRK54_RS00520	0.12	-0.2
109,442	+		LRK54_RS00520	0.12	-0.5
109,442	+		LRK54_RS00520	0.12	+2.0
109,442	+		LRK54_RS00520	0.12	-0.1
109,443	-		LRK54_RS00520	0.12	-1.2
109,443	-		LRK54_RS00520	0.12	-1.3
109,443	-		LRK54_RS00520	0.12	-1.0
109,443	-		LRK54_RS00520	0.12	+0.7
109,443	-		LRK54_RS00520	0.12	+3.0
109,443	-		LRK54_RS00520	0.12	-0.0
109,443	-		LRK54_RS00520	0.12	-2.2
109,443	-		LRK54_RS00520	0.12	-1.1
109,443	-		LRK54_RS00520	0.12	+0.1
109,451	+		LRK54_RS00520	0.12	-2.2
109,451	+		LRK54_RS00520	0.12	-0.9
109,451	+		LRK54_RS00520	0.12	-2.0
109,451	+		LRK54_RS00520	0.12	+0.8
109,451	+		LRK54_RS00520	0.12	+0.2
109,451	+		LRK54_RS00520	0.12	-0.8
109,451	+		LRK54_RS00520	0.12	-0.0
109,452	-		LRK54_RS00520	0.12	-1.8
109,452	-		LRK54_RS00520	0.12	+1.0
109,452	-		LRK54_RS00520	0.12	-0.9
109,452	-		LRK54_RS00520	0.12	-1.3
109,452	-		LRK54_RS00520	0.12	-0.6
109,461	-		LRK54_RS00520	0.12	-1.6
109,796	+		LRK54_RS00520	0.24	+0.7
109,796	+		LRK54_RS00520	0.24	-0.0
109,797	-		LRK54_RS00520	0.24	-1.9
109,797	-		LRK54_RS00520	0.24	-1.3
109,988	+		LRK54_RS00520	0.31	+1.3
109,988	+		LRK54_RS00520	0.31	-2.1
109,988	+		LRK54_RS00520	0.31	-0.9
109,988	+		LRK54_RS00520	0.31	-0.6
109,988	+		LRK54_RS00520	0.31	+0.3
109,988	+		LRK54_RS00520	0.31	-1.0
109,988	+		LRK54_RS00520	0.31	+0.2
109,988	+		LRK54_RS00520	0.31	-0.6
109,988	+		LRK54_RS00520	0.31	-2.6
109,989	-		LRK54_RS00520	0.31	-1.7
109,989	-		LRK54_RS00520	0.31	-1.2
109,989	-		LRK54_RS00520	0.31	-0.6
109,989	-		LRK54_RS00520	0.31	-0.6
109,989	-		LRK54_RS00520	0.31	-1.6
109,989	-		LRK54_RS00520	0.31	-0.6
109,989	-		LRK54_RS00520	0.31	-1.0
110,051	+		LRK54_RS00520	0.33	-1.1
110,153	+		LRK54_RS00520	0.36	-0.8
110,153	+		LRK54_RS00520	0.36	+1.0
110,153	+		LRK54_RS00520	0.36	+0.5
110,153	+		LRK54_RS00520	0.36	-0.4
110,153	+		LRK54_RS00520	0.36	-1.0
110,153	+		LRK54_RS00520	0.36	-0.6
110,153	+		LRK54_RS00520	0.36	-0.6
110,153	+		LRK54_RS00520	0.36	-0.7
110,153	+		LRK54_RS00520	0.36	-1.5
110,153	+		LRK54_RS00520	0.36	-1.5
110,153	+		LRK54_RS00520	0.36	-0.8
110,153	+		LRK54_RS00520	0.36	-1.9
110,153	+		LRK54_RS00520	0.36	+0.2
110,153	+		LRK54_RS00520	0.36	-0.6
110,153	+		LRK54_RS00520	0.36	-0.6
110,153	+		LRK54_RS00520	0.36	-2.3
110,153	+		LRK54_RS00520	0.36	-1.0
110,153	+		LRK54_RS00520	0.36	-2.3
110,153	+		LRK54_RS00520	0.36	-0.3
110,153	+		LRK54_RS00520	0.36	-1.8
110,153	+		LRK54_RS00520	0.36	-0.6
110,153	+		LRK54_RS00520	0.36	-0.2
110,153	+		LRK54_RS00520	0.36	+1.0
110,154	-		LRK54_RS00520	0.37	-0.5
110,154	-		LRK54_RS00520	0.37	-1.6
110,154	-		LRK54_RS00520	0.37	-0.4
110,154	-		LRK54_RS00520	0.37	-0.0
110,154	-		LRK54_RS00520	0.37	-1.6
110,154	-		LRK54_RS00520	0.37	-0.0
110,154	-		LRK54_RS00520	0.37	-2.5
110,154	-		LRK54_RS00520	0.37	-3.0
110,154	-		LRK54_RS00520	0.37	-0.6
110,154	-		LRK54_RS00520	0.37	-1.6
110,154	-		LRK54_RS00520	0.37	-1.4
110,154	-		LRK54_RS00520	0.37	+0.3
110,154	-		LRK54_RS00520	0.37	-1.3
110,154	-		LRK54_RS00520	0.37	-0.3
110,154	-		LRK54_RS00520	0.37	-0.7
110,154	-		LRK54_RS00520	0.37	-0.8
110,154	-		LRK54_RS00520	0.37	-2.1
110,162	+		LRK54_RS00520	0.37	-0.8
110,162	+		LRK54_RS00520	0.37	-0.0
110,163	-		LRK54_RS00520	0.37	-2.3
110,163	-		LRK54_RS00520	0.37	-0.5
110,564	+		LRK54_RS00520	0.51	-1.3
110,564	+		LRK54_RS00520	0.51	+0.4
110,564	+		LRK54_RS00520	0.51	-1.8
110,564	+		LRK54_RS00520	0.51	-2.7
110,564	+		LRK54_RS00520	0.51	-0.5
110,564	+		LRK54_RS00520	0.51	-0.8
110,564	+		LRK54_RS00520	0.51	-0.9
110,564	+		LRK54_RS00520	0.51	-2.3
110,564	+		LRK54_RS00520	0.51	+1.0
110,564	+		LRK54_RS00520	0.51	-0.8
110,564	+		LRK54_RS00520	0.51	-0.6
110,564	+		LRK54_RS00520	0.51	-0.2
110,565	-		LRK54_RS00520	0.51	+2.0
110,565	-		LRK54_RS00520	0.51	-0.0
110,565	-		LRK54_RS00520	0.51	-1.0
110,565	-		LRK54_RS00520	0.51	-1.8
110,565	-		LRK54_RS00520	0.51	-2.5
110,565	-		LRK54_RS00520	0.51	-0.7
110,565	-		LRK54_RS00520	0.51	-0.0
110,565	-		LRK54_RS00520	0.51	-0.6
110,565	-		LRK54_RS00520	0.51	-1.8
110,565	-		LRK54_RS00520	0.51	-2.2
110,565	-		LRK54_RS00520	0.51	-0.2
110,565	-		LRK54_RS00520	0.51	-0.6
110,565	-		LRK54_RS00520	0.51	-0.6
110,565	-		LRK54_RS00520	0.51	-1.1
110,565	-		LRK54_RS00520	0.51	-2.0
110,565	-		LRK54_RS00520	0.51	-1.2
110,565	-		LRK54_RS00520	0.51	-2.0
110,726	+		LRK54_RS00520	0.56	-0.0
110,726	+		LRK54_RS00520	0.56	-1.0
110,726	+		LRK54_RS00520	0.56	-0.6
110,726	+		LRK54_RS00520	0.56	-1.8
110,726	+		LRK54_RS00520	0.56	-1.4
110,726	+		LRK54_RS00520	0.56	-2.3
110,726	+		LRK54_RS00520	0.56	+0.1
110,726	+		LRK54_RS00520	0.56	-1.0
110,726	+		LRK54_RS00520	0.56	-1.1
110,726	+		LRK54_RS00520	0.56	-0.6
110,726	+		LRK54_RS00520	0.56	-0.0
110,727	-		LRK54_RS00520	0.56	-2.0
110,727	-		LRK54_RS00520	0.56	+0.3
110,727	-		LRK54_RS00520	0.56	+0.3
110,727	-		LRK54_RS00520	0.56	-1.7
110,727	-		LRK54_RS00520	0.56	-0.3
110,727	-		LRK54_RS00520	0.56	-0.0
110,727	-		LRK54_RS00520	0.56	-1.7
110,727	-		LRK54_RS00520	0.56	-1.6
110,727	-		LRK54_RS00520	0.56	-1.3
110,727	-		LRK54_RS00520	0.56	-1.2
110,727	-		LRK54_RS00520	0.56	-0.0
110,727	-		LRK54_RS00520	0.56	+0.6
110,727	-		LRK54_RS00520	0.56	-1.8
110,777	+		LRK54_RS00520	0.58	-2.2
110,777	+		LRK54_RS00520	0.58	-2.5
110,778	-		LRK54_RS00520	0.58	-0.6
110,823	-		LRK54_RS00520	0.60	+0.1
110,823	-		LRK54_RS00520	0.60	-0.0
110,823	-		LRK54_RS00520	0.60	-0.9
110,849	+		LRK54_RS00520	0.61	-0.5
110,849	+		LRK54_RS00520	0.61	-0.0
110,849	+		LRK54_RS00520	0.61	-2.2
110,850	-		LRK54_RS00520	0.61	-1.0
111,017	+		LRK54_RS00520	0.67	+1.0
111,017	+		LRK54_RS00520	0.67	-0.0
111,017	+		LRK54_RS00520	0.67	-0.6
111,017	+		LRK54_RS00520	0.67	-1.2
111,017	+		LRK54_RS00520	0.67	-0.4
111,018	-		LRK54_RS00520	0.67	-1.3
111,018	-		LRK54_RS00520	0.67	+0.6
111,018	-		LRK54_RS00520	0.67	-0.6
111,018	-		LRK54_RS00520	0.67	-2.2
111,018	-		LRK54_RS00520	0.67	-0.2
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111,050	+		LRK54_RS00520	0.68	-1.6
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111,128	+		LRK54_RS00520	0.70	-1.8
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111,784	+				-0.9
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111,785	-				-3.1
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