Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01920

Experiment: PYE_noCalcium 4C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 4C survival rep2 28 days
2,062,539	-				+0.6
2,062,543	+				+1.9
2,062,546	-				-1.8
2,062,551	-				+0.4
2,062,558	+				+0.1
2,062,591	-				+0.1
2,062,621	-				-1.7
2,062,711	-				+0.1
2,062,813	-				-2.1
2,062,850	+		CCNA_01919	0.16	-0.1
2,062,853	-		CCNA_01919	0.16	-0.7
2,062,880	-		CCNA_01919	0.20	-2.7
2,062,913	-		CCNA_01919	0.25	+0.8
2,062,937	-		CCNA_01919	0.29	-0.9
2,062,938	-		CCNA_01919	0.29	-3.4
2,062,947	-		CCNA_01919	0.31	+0.5
2,062,973	-		CCNA_01919	0.35	-2.7
2,062,973	-		CCNA_01919	0.35	+0.2
2,062,973	-		CCNA_01919	0.35	+0.9
2,062,973	-		CCNA_01919	0.35	-0.0
2,062,973	-		CCNA_01919	0.35	+0.6
2,062,973	-		CCNA_01919	0.35	-0.2
2,062,973	-		CCNA_01919	0.35	-1.0
2,063,017	+		CCNA_01919	0.41	+0.7
2,063,052	+		CCNA_01919	0.47	+1.1
2,063,052	+		CCNA_01919	0.47	+0.4
2,063,060	-		CCNA_01919	0.48	-0.2
2,063,098	+		CCNA_01919	0.54	+1.0
2,063,103	+		CCNA_01919	0.55	+0.7
2,063,109	+		CCNA_01919	0.56	+0.6
2,063,124	+		CCNA_01919	0.58	+1.1
2,063,132	-		CCNA_01919	0.59	-2.9
2,063,132	-		CCNA_01919	0.59	-2.0
2,063,132	-		CCNA_01919	0.59	-0.5
2,063,154	-		CCNA_01919	0.63	-1.6
2,063,207	+		CCNA_01919	0.71	+0.7
2,063,207	+		CCNA_01919	0.71	+1.3
2,063,215	-		CCNA_01919	0.72	+1.1
2,063,215	-		CCNA_01919	0.72	-2.6
2,063,268	+		CCNA_01919	0.80	-1.3
2,063,268	+		CCNA_01919	0.80	-0.3
2,063,268	+		CCNA_01919	0.80	+0.3
2,063,268	+		CCNA_01919	0.80	-0.3
2,063,276	-		CCNA_01919	0.82	+0.1
2,063,276	-		CCNA_01919	0.82	+0.9
2,063,276	-		CCNA_01919	0.82	+0.4
2,063,347	-				-0.1
2,063,382	-				+0.7
2,063,418	+				-0.0
2,063,427	-				-2.7
2,063,438	+				+0.1
2,063,506	+				+0.6
2,063,521	-				+0.1
2,063,543	+				-0.7
2,063,570	-				-0.3
2,063,618	+				-1.4
2,063,621	-				-0.6
2,063,635	-				-1.4
2,063,644	-				+0.1
2,063,649	-				-0.7
2,063,649	-				+0.5
2,063,653	+				-2.0
2,063,681	-				-2.0
2,063,711	+				-2.2
2,063,760	-				-0.3
2,063,841	-				+0.6
2,063,841	-				+0.2
2,063,864	+		CCNA_01920	0.10	+1.8
2,063,864	+		CCNA_01920	0.10	-1.4
2,063,872	-		CCNA_01920	0.10	-0.7
2,063,885	+		CCNA_01920	0.11	-1.8
2,063,929	+		CCNA_01920	0.12	-1.3
2,063,929	+		CCNA_01920	0.12	-0.5
2,063,953	-		CCNA_01920	0.13	+0.5
2,063,958	-		CCNA_01920	0.13	-0.2
2,063,994	-		CCNA_01920	0.14	+0.2
2,064,011	-		CCNA_01920	0.14	-0.9
2,064,034	-		CCNA_01920	0.15	-0.1
2,064,058	-		CCNA_01920	0.16	-0.8
2,064,067	-		CCNA_01920	0.16	-0.6
2,064,085	+		CCNA_01920	0.16	-1.5
2,064,111	+		CCNA_01920	0.17	+2.1
2,064,111	+		CCNA_01920	0.17	-1.8
2,064,117	+		CCNA_01920	0.17	-2.6
2,064,119	-		CCNA_01920	0.17	-1.4
2,064,119	-		CCNA_01920	0.17	-0.2
2,064,119	-		CCNA_01920	0.17	-0.9
2,064,132	+		CCNA_01920	0.18	-0.6
2,064,277	+		CCNA_01920	0.22	-2.2
2,064,282	+		CCNA_01920	0.22	+2.1
2,064,287	+		CCNA_01920	0.22	+2.1
2,064,290	-		CCNA_01920	0.22	-1.7
2,064,379	+		CCNA_01920	0.25	+0.1
2,064,379	+		CCNA_01920	0.25	+0.5
2,064,524	+		CCNA_01920	0.29	-1.9
2,064,532	-		CCNA_01920	0.29	+0.5
2,064,532	-		CCNA_01920	0.29	+0.8
2,064,573	+		CCNA_01920	0.31	+2.1
2,064,599	-		CCNA_01920	0.31	-2.0
2,064,602	-		CCNA_01920	0.31	-1.1
2,064,602	-		CCNA_01920	0.31	+0.4
2,064,602	-		CCNA_01920	0.31	+0.5
2,064,609	-		CCNA_01920	0.32	-0.5
2,064,609	-		CCNA_01920	0.32	-0.9
2,064,638	-		CCNA_01920	0.32	-1.2
2,064,672	+		CCNA_01920	0.33	-1.8
2,064,715	-		CCNA_01920	0.35	-1.8
2,064,728	-		CCNA_01920	0.35	+0.1
2,064,742	-		CCNA_01920	0.35	-0.9
2,064,766	+		CCNA_01920	0.36	-0.7
2,064,774	-		CCNA_01920	0.36	-0.6
2,064,806	+		CCNA_01920	0.37	-3.0
2,064,873	-		CCNA_01920	0.39	-1.8
2,064,920	+		CCNA_01920	0.41	-1.4
2,064,928	-		CCNA_01920	0.41	-0.5
2,064,938	-		CCNA_01920	0.41	-0.8
2,064,962	+		CCNA_01920	0.42	-1.9
2,064,962	+		CCNA_01920	0.42	-0.5
2,064,970	-		CCNA_01920	0.42	-1.4
2,065,033	+		CCNA_01920	0.44	+5.1
2,065,033	+		CCNA_01920	0.44	-1.9
2,065,090	-		CCNA_01920	0.45	-1.5
2,065,120	-		CCNA_01920	0.46	-1.9
2,065,120	-		CCNA_01920	0.46	-1.8
2,065,140	-		CCNA_01920	0.47	-0.8
2,065,150	-		CCNA_01920	0.47	+0.1
2,065,150	-		CCNA_01920	0.47	-0.3
2,065,150	-		CCNA_01920	0.47	-0.9
2,065,155	-		CCNA_01920	0.47	-1.0
2,065,191	+		CCNA_01920	0.48	+3.1
2,065,257	+		CCNA_01920	0.50	-1.4
2,065,265	-		CCNA_01920	0.50	-0.3
2,065,303	-		CCNA_01920	0.52	-0.7
2,065,339	-		CCNA_01920	0.53	-1.4
2,065,404	+		CCNA_01920	0.54	-1.1
2,065,409	+		CCNA_01920	0.55	+0.5
2,065,432	-		CCNA_01920	0.55	-0.7
2,065,434	+		CCNA_01920	0.55	-3.9
2,065,442	-		CCNA_01920	0.56	-1.8
2,065,442	-		CCNA_01920	0.56	-0.2
2,065,447	-		CCNA_01920	0.56	-1.2
2,065,452	-		CCNA_01920	0.56	+0.5
2,065,472	+		CCNA_01920	0.56	-1.4
2,065,472	+		CCNA_01920	0.56	-0.5
2,065,480	-		CCNA_01920	0.57	-0.7
2,065,480	-		CCNA_01920	0.57	-0.6
2,065,480	-		CCNA_01920	0.57	-0.6
2,065,480	-		CCNA_01920	0.57	-0.7
2,065,515	+		CCNA_01920	0.58	-2.0
2,065,515	+		CCNA_01920	0.58	-1.7
2,065,550	+		CCNA_01920	0.59	-1.1
2,065,634	-		CCNA_01920	0.61	-0.1
2,065,740	+		CCNA_01920	0.64	+0.5
2,065,760	+		CCNA_01920	0.65	-1.2
2,065,760	+		CCNA_01920	0.65	+1.1
2,065,763	-		CCNA_01920	0.65	-0.6
2,065,808	+		CCNA_01920	0.66	-2.0
2,065,821	-		CCNA_01920	0.66	-0.9
2,065,831	-		CCNA_01920	0.67	+1.1
2,065,847	-		CCNA_01920	0.67	-1.6
2,065,870	+		CCNA_01920	0.68	-1.7
2,065,870	+		CCNA_01920	0.68	-1.1
2,065,870	+		CCNA_01920	0.68	+0.6
2,065,878	-		CCNA_01920	0.68	-0.3
2,065,917	+		CCNA_01920	0.69	-1.4
2,065,928	+		CCNA_01920	0.70	-0.3
2,065,940	+		CCNA_01920	0.70	-1.7
2,065,940	+		CCNA_01920	0.70	-0.4
2,065,948	-		CCNA_01920	0.70	+0.3
2,065,948	-		CCNA_01920	0.70	+1.2
2,065,948	-		CCNA_01920	0.70	+0.5
2,065,974	+		CCNA_01920	0.71	-0.5
2,066,015	-		CCNA_01920	0.72	+0.5
2,066,049	+		CCNA_01920	0.73	-0.6
2,066,052	-		CCNA_01920	0.73	-1.2
2,066,054	+		CCNA_01920	0.73	+0.3
2,066,067	+		CCNA_01920	0.74	-1.5
2,066,075	-		CCNA_01920	0.74	-1.5
2,066,075	-		CCNA_01920	0.74	-0.5
2,066,075	-		CCNA_01920	0.74	-0.5
2,066,084	+		CCNA_01920	0.74	-2.2
2,066,142	-		CCNA_01920	0.76	-0.2
2,066,202	+		CCNA_01920	0.77	-2.5
2,066,202	+		CCNA_01920	0.77	+1.7
2,066,208	-		CCNA_01920	0.78	-2.1
2,066,208	-		CCNA_01920	0.78	+0.2
2,066,252	+		CCNA_01920	0.79	+1.1
2,066,260	-		CCNA_01920	0.79	-0.5
2,066,325	-		CCNA_01920	0.81	-0.3
2,066,342	+		CCNA_01920	0.82	+2.1
2,066,366	+		CCNA_01920	0.82	-1.1
2,066,425	-		CCNA_01920	0.84	+2.7
2,066,432	-		CCNA_01920	0.84	+0.1
2,066,432	-		CCNA_01920	0.84	-1.6
2,066,432	-		CCNA_01920	0.84	-2.1
2,066,437	-		CCNA_01920	0.84	-1.4
2,066,500	+		CCNA_01920	0.86	+1.1
2,066,527	+		CCNA_01920	0.87	-2.4
2,066,597	-		CCNA_01920	0.89	-0.2
2,066,607	+		CCNA_01920	0.89	-1.8
2,066,610	-		CCNA_01920	0.89	+0.8
2,066,659	+				+1.1
2,066,666	+				-0.7
2,066,676	+				+0.1
2,066,684	-				+0.2
2,066,684	-				+2.1
2,066,684	-				+0.5
2,066,684	-				-2.2
2,066,684	-				-1.1
2,066,684	-				-1.2
2,066,861	-				-0.6
2,066,894	+				-1.2
2,066,902	-				+0.9
2,066,902	-				-0.1
2,066,907	-				+1.0
2,066,914	+				-0.1
2,066,922	-				-0.6
2,066,922	-				-0.2
2,066,929	+				+2.1
2,067,044	-		CCNA_01921	0.19	+2.2
2,067,269	+				-1.6
2,067,286	+				-2.1
2,067,299	-				+0.7
2,067,316	-				-0.7
2,067,334	+				-1.3
2,067,334	+				+1.5
2,067,334	+				-0.1
2,067,349	+				+2.1
2,067,352	-				+2.1
2,067,416	-		CCNA_01922	0.15	-1.4
2,067,603	-		CCNA_01922	0.41	-2.2
2,067,610	+		CCNA_01922	0.42	+1.0
2,067,635	-		CCNA_01922	0.45	-0.6
2,067,732	+		CCNA_01922	0.58	+0.4
2,067,747	+		CCNA_01922	0.61	+0.5
2,067,753	-		CCNA_01922	0.61	-1.1
2,067,768	+		CCNA_01922	0.63	+2.1
2,067,785	+		CCNA_01922	0.66	+0.5
2,067,803	-		CCNA_01922	0.68	-0.5
2,067,807	+		CCNA_01922	0.69	-3.2
2,067,807	+		CCNA_01922	0.69	-1.6
2,067,807	+		CCNA_01922	0.69	+0.5
2,067,811	-		CCNA_01922	0.69	+3.4
2,067,815	-		CCNA_01922	0.70	+2.1
2,067,815	-		CCNA_01922	0.70	-0.1
2,067,825	-		CCNA_01922	0.71	-3.1
2,067,890	-		CCNA_01922	0.80	+0.6
2,067,933	+		CCNA_01922	0.86	+2.1
2,067,940	+		CCNA_01922	0.87	+1.1
2,067,943	-		CCNA_01922	0.87	+1.5
2,067,958	-		CCNA_01922	0.89	-1.0
2,067,958	-		CCNA_01922	0.89	-0.2