Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26230 and BWI76_RS26235 are separated by 144 nucleotides BWI76_RS26235 and BWI76_RS26240 overlap by 1 nucleotides BWI76_RS26240 and BWI76_RS26245 are separated by 180 nucleotides
BWI76_RS26230: BWI76_RS26230 - ATP-dependent DNA helicase, at 5,429,338 to 5,431,437
_RS26230
BWI76_RS26235: BWI76_RS26235 - gluconate transporter, at 5,431,582 to 5,432,922
_RS26235
BWI76_RS26240: BWI76_RS26240 - gluconokinase, at 5,432,922 to 5,433,452
_RS26240
BWI76_RS26245: BWI76_RS26245 - transcriptional regulator, at 5,433,633 to 5,434,628
_RS26245
Position (kb) 5431
5432
5433 Strain fitness (log2 ratio) -1
0
1
2 at 5430.606 kb on + strand, within BWI76_RS26230 at 5430.610 kb on + strand, within BWI76_RS26230 at 5430.614 kb on - strand, within BWI76_RS26230 at 5430.693 kb on + strand, within BWI76_RS26230 at 5430.700 kb on + strand, within BWI76_RS26230 at 5430.887 kb on + strand, within BWI76_RS26230 at 5430.892 kb on + strand, within BWI76_RS26230 at 5430.988 kb on + strand, within BWI76_RS26230 at 5431.126 kb on - strand, within BWI76_RS26230 at 5431.368 kb on - strand at 5431.411 kb on + strand at 5431.411 kb on + strand at 5431.482 kb on + strand at 5431.576 kb on - strand at 5431.579 kb on + strand at 5431.587 kb on - strand at 5431.860 kb on + strand, within BWI76_RS26235 at 5431.911 kb on + strand, within BWI76_RS26235 at 5432.091 kb on - strand, within BWI76_RS26235 at 5432.294 kb on + strand, within BWI76_RS26235 at 5432.953 kb on - strand at 5433.773 kb on - strand, within BWI76_RS26245 at 5433.900 kb on - strand, within BWI76_RS26245
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 5,430,606 + BWI76_RS26230 0.60 -0.9 5,430,610 + BWI76_RS26230 0.61 +0.1 5,430,614 - BWI76_RS26230 0.61 -0.1 5,430,693 + BWI76_RS26230 0.65 -0.1 5,430,700 + BWI76_RS26230 0.65 -0.3 5,430,887 + BWI76_RS26230 0.74 +0.4 5,430,892 + BWI76_RS26230 0.74 -0.0 5,430,988 + BWI76_RS26230 0.79 -0.2 5,431,126 - BWI76_RS26230 0.85 -1.1 5,431,368 - -0.4 5,431,411 + +0.9 5,431,411 + -0.3 5,431,482 + +0.1 5,431,576 - -0.9 5,431,579 + +0.1 5,431,587 - +0.1 5,431,860 + BWI76_RS26235 0.21 +0.2 5,431,911 + BWI76_RS26235 0.25 +0.2 5,432,091 - BWI76_RS26235 0.38 +0.4 5,432,294 + BWI76_RS26235 0.53 +2.0 5,432,953 - -1.3 5,433,773 - BWI76_RS26245 0.14 +0.3 5,433,900 - BWI76_RS26245 0.27 -0.0
Or see this region's nucleotide sequence