Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18350 and BWI76_RS18355 overlap by 4 nucleotides BWI76_RS18355 and BWI76_RS18360 are separated by 15 nucleotides
BWI76_RS18350: BWI76_RS18350 - L-cystine ABC transporter ATP-binding protein YecC, at 3,809,827 to 3,810,579
_RS18350
BWI76_RS18355: BWI76_RS18355 - amino acid ABC transporter permease, at 3,810,576 to 3,811,244
_RS18355
BWI76_RS18360: BWI76_RS18360 - aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein, at 3,811,260 to 3,812,246
_RS18360
Position (kb)
3810
3811
3812 Strain fitness (log2 ratio)
-1
0
1 at 3809.695 kb on - strand at 3809.698 kb on + strand at 3809.698 kb on + strand at 3809.698 kb on + strand at 3809.706 kb on - strand at 3809.723 kb on + strand at 3809.723 kb on + strand at 3809.723 kb on + strand at 3809.723 kb on + strand at 3809.723 kb on - strand at 3809.731 kb on - strand at 3809.748 kb on - strand at 3809.791 kb on + strand at 3809.799 kb on - strand at 3809.806 kb on + strand at 3809.819 kb on - strand at 3809.861 kb on + strand at 3809.866 kb on + strand at 3810.023 kb on + strand, within BWI76_RS18350 at 3810.198 kb on + strand, within BWI76_RS18350 at 3810.276 kb on + strand, within BWI76_RS18350 at 3810.324 kb on - strand, within BWI76_RS18350 at 3810.357 kb on + strand, within BWI76_RS18350 at 3810.365 kb on - strand, within BWI76_RS18350 at 3810.437 kb on - strand, within BWI76_RS18350 at 3810.518 kb on - strand at 3810.600 kb on + strand at 3810.724 kb on + strand, within BWI76_RS18355 at 3810.737 kb on - strand, within BWI76_RS18355 at 3811.005 kb on - strand, within BWI76_RS18355 at 3811.173 kb on - strand, within BWI76_RS18355 at 3811.226 kb on + strand at 3811.234 kb on - strand at 3811.286 kb on + strand at 3811.486 kb on + strand, within BWI76_RS18360 at 3811.800 kb on - strand, within BWI76_RS18360 at 3811.968 kb on - strand, within BWI76_RS18360
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 3,809,695 - -0.2 3,809,698 + +0.2 3,809,698 + -0.2 3,809,698 + +1.3 3,809,706 - +0.6 3,809,723 + -1.0 3,809,723 + -0.7 3,809,723 + +0.3 3,809,723 + -0.2 3,809,723 - +0.4 3,809,731 - -0.0 3,809,748 - -0.3 3,809,791 + +0.1 3,809,799 - -0.3 3,809,806 + -0.5 3,809,819 - -0.2 3,809,861 + +0.6 3,809,866 + -0.6 3,810,023 + BWI76_RS18350 0.26 -0.9 3,810,198 + BWI76_RS18350 0.49 +0.2 3,810,276 + BWI76_RS18350 0.60 +0.5 3,810,324 - BWI76_RS18350 0.66 +0.2 3,810,357 + BWI76_RS18350 0.70 -1.2 3,810,365 - BWI76_RS18350 0.71 +0.6 3,810,437 - BWI76_RS18350 0.81 +0.2 3,810,518 - -0.1 3,810,600 + +0.1 3,810,724 + BWI76_RS18355 0.22 +1.4 3,810,737 - BWI76_RS18355 0.24 +0.4 3,811,005 - BWI76_RS18355 0.64 +0.1 3,811,173 - BWI76_RS18355 0.89 +0.5 3,811,226 + -0.8 3,811,234 - -0.1 3,811,286 + -0.2 3,811,486 + BWI76_RS18360 0.23 +0.5 3,811,800 - BWI76_RS18360 0.55 -0.9 3,811,968 - BWI76_RS18360 0.72 +0.3
Or see this region's nucleotide sequence