Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17885 and BWI76_RS17890 are separated by 446 nucleotides BWI76_RS17890 and BWI76_RS17895 are separated by 60 nucleotides BWI76_RS17895 and BWI76_RS17900 are separated by 12 nucleotides
BWI76_RS17885: BWI76_RS17885 - hypothetical protein, at 3,719,573 to 3,721,132
_RS17885
BWI76_RS17890: BWI76_RS17890 - PTS mannose transporter subunit EIIAB, at 3,721,579 to 3,722,547
_RS17890
BWI76_RS17895: BWI76_RS17895 - PTS mannose/fructose/sorbose transporter subunit IIC, at 3,722,608 to 3,723,408
_RS17895
BWI76_RS17900: BWI76_RS17900 - PTS mannose transporter subunit IID, at 3,723,421 to 3,724,272
_RS17900
Position (kb)
3721
3722
3723 Strain fitness (log2 ratio)
-1
0
1
2 at 3720.615 kb on + strand, within BWI76_RS17885 at 3720.786 kb on + strand, within BWI76_RS17885 at 3721.179 kb on - strand at 3721.263 kb on + strand at 3721.276 kb on + strand at 3721.282 kb on + strand at 3721.375 kb on - strand at 3721.460 kb on - strand at 3721.487 kb on + strand at 3721.535 kb on + strand at 3721.543 kb on - strand at 3721.543 kb on - strand at 3721.571 kb on + strand at 3721.700 kb on + strand, within BWI76_RS17890 at 3721.880 kb on + strand, within BWI76_RS17890 at 3722.048 kb on + strand, within BWI76_RS17890 at 3722.346 kb on - strand, within BWI76_RS17890 at 3722.471 kb on + strand at 3722.471 kb on + strand at 3722.477 kb on + strand at 3722.479 kb on - strand at 3722.640 kb on + strand at 3722.711 kb on + strand, within BWI76_RS17895 at 3722.719 kb on - strand, within BWI76_RS17895 at 3722.862 kb on - strand, within BWI76_RS17895 at 3723.115 kb on - strand, within BWI76_RS17895 at 3723.125 kb on - strand at 3723.311 kb on - strand, within BWI76_RS17895 at 3723.339 kb on + strand at 3723.358 kb on + strand at 3723.405 kb on - strand at 3723.491 kb on + strand at 3723.501 kb on + strand at 3723.542 kb on - strand, within BWI76_RS17900
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 3,720,615 + BWI76_RS17885 0.67 -0.2 3,720,786 + BWI76_RS17885 0.78 +0.5 3,721,179 - -0.2 3,721,263 + -0.4 3,721,276 + -0.3 3,721,282 + -0.0 3,721,375 - +0.1 3,721,460 - +0.3 3,721,487 + +0.7 3,721,535 + -0.9 3,721,543 - -0.3 3,721,543 - -0.0 3,721,571 + +0.5 3,721,700 + BWI76_RS17890 0.12 +2.1 3,721,880 + BWI76_RS17890 0.31 +0.0 3,722,048 + BWI76_RS17890 0.48 -0.2 3,722,346 - BWI76_RS17890 0.79 +0.3 3,722,471 + +0.4 3,722,471 + -0.1 3,722,477 + +0.4 3,722,479 - -0.1 3,722,640 + +0.3 3,722,711 + BWI76_RS17895 0.13 +0.2 3,722,719 - BWI76_RS17895 0.14 +0.2 3,722,862 - BWI76_RS17895 0.32 +0.8 3,723,115 - BWI76_RS17895 0.63 -0.2 3,723,125 - +1.3 3,723,311 - BWI76_RS17895 0.88 +0.0 3,723,339 + -0.3 3,723,358 + -1.6 3,723,405 - +1.8 3,723,491 + +0.6 3,723,501 + -0.1 3,723,542 - BWI76_RS17900 0.14 -0.4
Or see this region's nucleotide sequence