Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14155 and BWI76_RS14160 are separated by 11 nucleotides BWI76_RS14160 and BWI76_RS14165 are separated by 243 nucleotides
BWI76_RS14155: BWI76_RS14155 - transketolase, at 2,961,519 to 2,962,538
_RS14155
BWI76_RS14160: BWI76_RS14160 - ABC transporter substrate-binding protein, at 2,962,550 to 2,963,512
_RS14160
BWI76_RS14165: BWI76_RS14165 - trans-acting regulatory protein of aco operon, at 2,963,756 to 2,966,509
_RS14165
Position (kb)
2962
2963
2964 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2961.600 kb on - strand at 2961.600 kb on - strand at 2961.602 kb on + strand at 2962.064 kb on + strand, within BWI76_RS14155 at 2962.351 kb on - strand, within BWI76_RS14155 at 2962.356 kb on - strand, within BWI76_RS14155 at 2962.457 kb on - strand at 2962.690 kb on - strand, within BWI76_RS14160 at 2962.964 kb on + strand, within BWI76_RS14160 at 2963.020 kb on - strand, within BWI76_RS14160 at 2963.198 kb on - strand, within BWI76_RS14160 at 2963.241 kb on + strand, within BWI76_RS14160 at 2963.375 kb on + strand, within BWI76_RS14160 at 2963.388 kb on + strand, within BWI76_RS14160 at 2963.481 kb on + strand at 2963.481 kb on + strand at 2963.557 kb on + strand at 2963.826 kb on - strand at 2964.005 kb on - strand at 2964.137 kb on - strand, within BWI76_RS14165 at 2964.246 kb on - strand, within BWI76_RS14165 at 2964.290 kb on - strand, within BWI76_RS14165 at 2964.461 kb on - strand, within BWI76_RS14165
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 2,961,600 - -0.3 2,961,600 - -0.4 2,961,602 + -0.6 2,962,064 + BWI76_RS14155 0.53 -0.3 2,962,351 - BWI76_RS14155 0.82 -0.4 2,962,356 - BWI76_RS14155 0.82 -0.8 2,962,457 - +0.4 2,962,690 - BWI76_RS14160 0.15 -0.4 2,962,964 + BWI76_RS14160 0.43 +0.1 2,963,020 - BWI76_RS14160 0.49 -1.7 2,963,198 - BWI76_RS14160 0.67 -0.9 2,963,241 + BWI76_RS14160 0.72 -0.6 2,963,375 + BWI76_RS14160 0.86 -0.0 2,963,388 + BWI76_RS14160 0.87 -2.7 2,963,481 + +0.1 2,963,481 + +0.8 2,963,557 + +1.8 2,963,826 - +0.7 2,964,005 - +0.1 2,964,137 - BWI76_RS14165 0.14 -0.5 2,964,246 - BWI76_RS14165 0.18 +0.3 2,964,290 - BWI76_RS14165 0.19 -0.5 2,964,461 - BWI76_RS14165 0.26 -0.2
Or see this region's nucleotide sequence