Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11980 and BWI76_RS11985 are separated by 72 nucleotides BWI76_RS11985 and BWI76_RS11990 are separated by 177 nucleotides
BWI76_RS11980: BWI76_RS11980 - DeoR family transcriptional regulator, at 2,521,043 to 2,521,792
_RS11980
BWI76_RS11985: BWI76_RS11985 - hypothetical protein, at 2,521,865 to 2,522,047
_RS11985
BWI76_RS11990: BWI76_RS11990 - exoribonuclease II, at 2,522,225 to 2,524,159
_RS11990
Position (kb)
2521
2522
2523 Strain fitness (log2 ratio)
-1
0
1
2 at 2520.865 kb on + strand at 2520.880 kb on + strand at 2520.888 kb on - strand at 2520.889 kb on - strand at 2520.889 kb on - strand at 2520.889 kb on - strand at 2520.889 kb on - strand at 2520.889 kb on - strand at 2520.900 kb on + strand at 2520.900 kb on + strand at 2520.900 kb on + strand at 2520.900 kb on + strand at 2520.908 kb on - strand at 2520.908 kb on - strand at 2520.908 kb on - strand at 2520.908 kb on - strand at 2520.923 kb on - strand at 2520.923 kb on - strand at 2520.938 kb on - strand at 2521.020 kb on + strand at 2521.023 kb on - strand at 2521.030 kb on + strand at 2521.041 kb on + strand at 2521.041 kb on + strand at 2521.068 kb on + strand at 2521.356 kb on + strand, within BWI76_RS11980 at 2521.622 kb on - strand, within BWI76_RS11980 at 2521.805 kb on + strand at 2521.881 kb on + strand at 2521.881 kb on + strand at 2521.881 kb on + strand at 2521.881 kb on + strand at 2521.889 kb on - strand, within BWI76_RS11985 at 2521.889 kb on - strand, within BWI76_RS11985 at 2521.889 kb on - strand, within BWI76_RS11985 at 2521.978 kb on - strand, within BWI76_RS11985 at 2522.049 kb on + strand at 2522.057 kb on - strand at 2522.057 kb on - strand at 2522.198 kb on + strand at 2522.198 kb on + strand at 2522.206 kb on - strand at 2522.588 kb on - strand, within BWI76_RS11990 at 2522.892 kb on - strand, within BWI76_RS11990
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 2,520,865 + -0.6 2,520,880 + -0.1 2,520,888 - +0.0 2,520,889 - -0.7 2,520,889 - -1.0 2,520,889 - -0.6 2,520,889 - +0.6 2,520,889 - +0.3 2,520,900 + +0.6 2,520,900 + -0.1 2,520,900 + +0.3 2,520,900 + +2.0 2,520,908 - -1.2 2,520,908 - -0.1 2,520,908 - +0.2 2,520,908 - -0.1 2,520,923 - -0.8 2,520,923 - -0.1 2,520,938 - +0.6 2,521,020 + -0.8 2,521,023 - -0.1 2,521,030 + -0.5 2,521,041 + +0.6 2,521,041 + -1.3 2,521,068 + +0.7 2,521,356 + BWI76_RS11980 0.42 -1.0 2,521,622 - BWI76_RS11980 0.77 +0.1 2,521,805 + -1.1 2,521,881 + -0.3 2,521,881 + -0.6 2,521,881 + +0.0 2,521,881 + -0.1 2,521,889 - BWI76_RS11985 0.13 +1.2 2,521,889 - BWI76_RS11985 0.13 +0.2 2,521,889 - BWI76_RS11985 0.13 +0.1 2,521,978 - BWI76_RS11985 0.62 +0.4 2,522,049 + +0.4 2,522,057 - -0.6 2,522,057 - +0.1 2,522,198 + +1.5 2,522,198 + -0.2 2,522,206 - -0.8 2,522,588 - BWI76_RS11990 0.19 +0.5 2,522,892 - BWI76_RS11990 0.34 +0.2
Or see this region's nucleotide sequence