Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10290 and BWI76_RS10295 are separated by 51 nucleotides BWI76_RS10295 and BWI76_RS10300 are separated by 164 nucleotides
BWI76_RS10290: BWI76_RS10290 - transcriptional regulator, at 2,178,829 to 2,179,725
_RS10290
BWI76_RS10295: BWI76_RS10295 - short chain dehydrogenase/reductase family oxidoreductase, at 2,179,777 to 2,180,562
_RS10295
BWI76_RS10300: BWI76_RS10300 - MFS transporter, at 2,180,727 to 2,182,163
_RS10300
Position (kb)
2179
2180
2181 Strain fitness (log2 ratio)
-2
-1
0
1 at 2178.842 kb on - strand at 2179.198 kb on + strand, within BWI76_RS10290 at 2179.198 kb on + strand, within BWI76_RS10290 at 2179.206 kb on - strand, within BWI76_RS10290 at 2179.206 kb on - strand, within BWI76_RS10290 at 2179.255 kb on + strand, within BWI76_RS10290 at 2179.499 kb on + strand, within BWI76_RS10290 at 2179.507 kb on - strand at 2179.520 kb on + strand at 2179.622 kb on + strand, within BWI76_RS10290 at 2180.288 kb on + strand, within BWI76_RS10295 at 2180.309 kb on + strand, within BWI76_RS10295 at 2180.453 kb on - strand, within BWI76_RS10295 at 2180.466 kb on - strand, within BWI76_RS10295 at 2180.807 kb on + strand at 2180.838 kb on + strand at 2181.111 kb on + strand, within BWI76_RS10300 at 2181.390 kb on + strand, within BWI76_RS10300 at 2181.390 kb on + strand, within BWI76_RS10300 at 2181.508 kb on - strand, within BWI76_RS10300 at 2181.516 kb on + strand, within BWI76_RS10300
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 2,178,842 - +0.1 2,179,198 + BWI76_RS10290 0.41 +0.1 2,179,198 + BWI76_RS10290 0.41 +0.4 2,179,206 - BWI76_RS10290 0.42 -0.2 2,179,206 - BWI76_RS10290 0.42 -1.8 2,179,255 + BWI76_RS10290 0.47 +0.0 2,179,499 + BWI76_RS10290 0.75 +0.5 2,179,507 - +0.1 2,179,520 + +0.5 2,179,622 + BWI76_RS10290 0.88 -2.0 2,180,288 + BWI76_RS10295 0.65 +0.5 2,180,309 + BWI76_RS10295 0.68 -0.3 2,180,453 - BWI76_RS10295 0.86 +1.5 2,180,466 - BWI76_RS10295 0.88 +1.5 2,180,807 + +1.0 2,180,838 + -0.9 2,181,111 + BWI76_RS10300 0.27 -0.3 2,181,390 + BWI76_RS10300 0.46 +0.0 2,181,390 + BWI76_RS10300 0.46 -0.5 2,181,508 - BWI76_RS10300 0.54 -0.9 2,181,516 + BWI76_RS10300 0.55 +0.3
Or see this region's nucleotide sequence