Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09590 and BWI76_RS09595 are separated by 172 nucleotides BWI76_RS09595 and BWI76_RS09600 overlap by 4 nucleotides
BWI76_RS09590: BWI76_RS09590 - ATP-dependent OLD family endonuclease, at 2,005,650 to 2,007,308
_RS09590
BWI76_RS09595: BWI76_RS09595 - macrolide transporter subunit MacA, at 2,007,481 to 2,008,596
_RS09595
BWI76_RS09600: BWI76_RS09600 - macrolide ABC transporter permease/ATP-binding protein MacB, at 2,008,593 to 2,010,539
_RS09600
Position (kb)
2007
2008
2009 Strain fitness (log2 ratio)
-1
0
1 at 2006.654 kb on + strand, within BWI76_RS09590 at 2006.665 kb on - strand, within BWI76_RS09590 at 2006.788 kb on + strand, within BWI76_RS09590 at 2006.938 kb on + strand, within BWI76_RS09590 at 2007.241 kb on + strand at 2007.303 kb on + strand at 2007.311 kb on - strand at 2007.332 kb on + strand at 2007.340 kb on - strand at 2007.360 kb on - strand at 2007.360 kb on - strand at 2007.375 kb on - strand at 2007.459 kb on + strand at 2007.545 kb on - strand at 2007.616 kb on + strand, within BWI76_RS09595 at 2007.915 kb on - strand, within BWI76_RS09595 at 2008.219 kb on + strand, within BWI76_RS09595 at 2008.422 kb on + strand, within BWI76_RS09595 at 2008.669 kb on - strand at 2008.822 kb on + strand, within BWI76_RS09600 at 2009.085 kb on - strand, within BWI76_RS09600 at 2009.174 kb on - strand, within BWI76_RS09600 at 2009.179 kb on - strand, within BWI76_RS09600 at 2009.291 kb on - strand, within BWI76_RS09600 at 2009.342 kb on - strand, within BWI76_RS09600
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 2,006,654 + BWI76_RS09590 0.61 +0.4 2,006,665 - BWI76_RS09590 0.61 +0.1 2,006,788 + BWI76_RS09590 0.69 -1.1 2,006,938 + BWI76_RS09590 0.78 +0.2 2,007,241 + +1.5 2,007,303 + -0.7 2,007,311 - +0.1 2,007,332 + -0.0 2,007,340 - -0.2 2,007,360 - -0.8 2,007,360 - +0.1 2,007,375 - +0.3 2,007,459 + +0.7 2,007,545 - +0.3 2,007,616 + BWI76_RS09595 0.12 +0.3 2,007,915 - BWI76_RS09595 0.39 +0.3 2,008,219 + BWI76_RS09595 0.66 +0.4 2,008,422 + BWI76_RS09595 0.84 +0.6 2,008,669 - +0.2 2,008,822 + BWI76_RS09600 0.12 +0.5 2,009,085 - BWI76_RS09600 0.25 -0.3 2,009,174 - BWI76_RS09600 0.30 +0.5 2,009,179 - BWI76_RS09600 0.30 +1.1 2,009,291 - BWI76_RS09600 0.36 +0.0 2,009,342 - BWI76_RS09600 0.38 -1.0
Or see this region's nucleotide sequence