Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02720 and BWI76_RS02725 are separated by 84 nucleotides BWI76_RS02725 and BWI76_RS02730 are separated by 52 nucleotides BWI76_RS02730 and BWI76_RS02735 are separated by 191 nucleotides BWI76_RS02735 and BWI76_RS02740 overlap by 11 nucleotides
BWI76_RS02720: BWI76_RS02720 - NAD(P)-dependent oxidoreductase, at 551,086 to 551,934
_RS02720
BWI76_RS02725: BWI76_RS02725 - HxlR family transcriptional regulator, at 552,019 to 552,402
_RS02725
BWI76_RS02730: BWI76_RS02730 - 2',3'-cyclic-nucleotide 2'-phosphodiesterase, at 552,455 to 554,398
_RS02730
BWI76_RS02735: BWI76_RS02735 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 554,590 to 555,333
_RS02735
BWI76_RS02740: BWI76_RS02740 - putative transcriptional regulator, at 555,323 to 555,880
_RS02740
Position (kb) 552
553
554
555 Strain fitness (log2 ratio) -1
0
1 at 551.543 kb on - strand, within BWI76_RS02720 at 551.604 kb on - strand, within BWI76_RS02720 at 551.666 kb on + strand, within BWI76_RS02720 at 551.854 kb on - strand at 551.901 kb on - strand at 551.937 kb on + strand at 552.264 kb on - strand, within BWI76_RS02725 at 552.409 kb on + strand at 552.437 kb on - strand at 552.688 kb on + strand, within BWI76_RS02730 at 553.210 kb on + strand, within BWI76_RS02730 at 553.225 kb on + strand, within BWI76_RS02730 at 553.524 kb on + strand, within BWI76_RS02730 at 553.902 kb on + strand, within BWI76_RS02730 at 553.991 kb on + strand, within BWI76_RS02730 at 554.159 kb on + strand, within BWI76_RS02730 at 554.203 kb on - strand, within BWI76_RS02730 at 554.227 kb on + strand at 554.227 kb on + strand at 554.267 kb on + strand at 554.380 kb on - strand at 554.390 kb on - strand at 554.431 kb on + strand at 554.567 kb on + strand at 554.567 kb on + strand at 554.736 kb on - strand, within BWI76_RS02735 at 554.803 kb on - strand, within BWI76_RS02735 at 554.963 kb on - strand, within BWI76_RS02735 at 555.079 kb on - strand, within BWI76_RS02735 at 555.173 kb on - strand, within BWI76_RS02735 at 555.207 kb on - strand, within BWI76_RS02735
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml remove 551,543 - BWI76_RS02720 0.54 -1.0 551,604 - BWI76_RS02720 0.61 +0.3 551,666 + BWI76_RS02720 0.68 +0.8 551,854 - +0.4 551,901 - +1.2 551,937 + +0.5 552,264 - BWI76_RS02725 0.64 -0.2 552,409 + -0.4 552,437 - +0.2 552,688 + BWI76_RS02730 0.12 +1.3 553,210 + BWI76_RS02730 0.39 +0.5 553,225 + BWI76_RS02730 0.40 +0.3 553,524 + BWI76_RS02730 0.55 -0.1 553,902 + BWI76_RS02730 0.74 +0.8 553,991 + BWI76_RS02730 0.79 +0.7 554,159 + BWI76_RS02730 0.88 +0.9 554,203 - BWI76_RS02730 0.90 +0.1 554,227 + +0.3 554,227 + -0.0 554,267 + -0.4 554,380 - -0.3 554,390 - +0.3 554,431 + +0.3 554,567 + +0.1 554,567 + +0.4 554,736 - BWI76_RS02735 0.20 -1.3 554,803 - BWI76_RS02735 0.29 -0.7 554,963 - BWI76_RS02735 0.50 +1.6 555,079 - BWI76_RS02735 0.66 +0.1 555,173 - BWI76_RS02735 0.78 -0.2 555,207 - BWI76_RS02735 0.83 +1.2
Or see this region's nucleotide sequence