Experiment: Varel_Bryant medium with Chlorpromazine 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0557 and BT0558 are separated by 255 nucleotides BT0558 and BT0559 are separated by 3 nucleotides
BT0557: BT0557 - carbamyl phosphate synthetase (NCBI ptt file), at 690,250 to 693,477
BT0557
BT0558: BT0558 - mannose-1-phosphate guanylyltransferase (NCBI ptt file), at 693,733 to 694,785
BT0558
BT0559: BT0559 - transcriptional regulator (NCBI ptt file), at 694,789 to 695,682
BT0559
Position (kb) 693
694
695 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 692.923 kb on - strand, within BT0557 at 692.982 kb on + strand, within BT0557 at 693.006 kb on + strand, within BT0557 at 693.066 kb on + strand, within BT0557 at 693.094 kb on - strand, within BT0557 at 693.100 kb on - strand, within BT0557 at 693.138 kb on + strand, within BT0557 at 693.157 kb on + strand at 693.216 kb on + strand at 693.276 kb on + strand at 693.343 kb on - strand at 693.445 kb on - strand at 693.471 kb on + strand at 693.476 kb on - strand at 693.578 kb on - strand at 693.578 kb on - strand at 693.608 kb on + strand at 693.608 kb on + strand at 693.631 kb on - strand at 693.750 kb on + strand at 693.831 kb on - strand at 693.831 kb on - strand at 693.927 kb on + strand, within BT0558 at 693.931 kb on + strand, within BT0558 at 694.018 kb on + strand, within BT0558 at 694.018 kb on + strand, within BT0558 at 694.204 kb on + strand, within BT0558 at 694.207 kb on - strand, within BT0558 at 694.315 kb on + strand, within BT0558 at 694.315 kb on + strand, within BT0558 at 694.357 kb on - strand, within BT0558 at 694.376 kb on + strand, within BT0558 at 694.427 kb on - strand, within BT0558 at 694.596 kb on + strand, within BT0558 at 694.663 kb on - strand, within BT0558 at 694.705 kb on + strand at 694.707 kb on + strand at 694.707 kb on + strand at 694.883 kb on - strand, within BT0559 at 694.934 kb on - strand, within BT0559 at 694.987 kb on + strand, within BT0559 at 694.988 kb on - strand, within BT0559 at 695.001 kb on - strand, within BT0559 at 695.031 kb on - strand, within BT0559 at 695.059 kb on - strand, within BT0559 at 695.148 kb on + strand, within BT0559 at 695.151 kb on - strand, within BT0559 at 695.151 kb on - strand, within BT0559 at 695.151 kb on - strand, within BT0559 at 695.160 kb on + strand, within BT0559 at 695.160 kb on + strand, within BT0559 at 695.168 kb on - strand, within BT0559 at 695.437 kb on - strand, within BT0559 at 695.551 kb on - strand, within BT0559 at 695.628 kb on + strand at 695.776 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant medium with Chlorpromazine 0.05 mM remove 692,923 - BT0557 0.83 +0.5 692,982 + BT0557 0.85 -1.7 693,006 + BT0557 0.85 -0.6 693,066 + BT0557 0.87 -0.0 693,094 - BT0557 0.88 -2.0 693,100 - BT0557 0.88 -0.6 693,138 + BT0557 0.89 -3.0 693,157 + +0.3 693,216 + -1.4 693,276 + -0.6 693,343 - -1.4 693,445 - -0.6 693,471 + -1.8 693,476 - -1.5 693,578 - -1.3 693,578 - -1.0 693,608 + -2.1 693,608 + +1.4 693,631 - -0.6 693,750 + -0.4 693,831 - -0.9 693,831 - -0.0 693,927 + BT0558 0.18 -2.6 693,931 + BT0558 0.19 -2.6 694,018 + BT0558 0.27 -2.2 694,018 + BT0558 0.27 -0.0 694,204 + BT0558 0.45 -2.6 694,207 - BT0558 0.45 -1.4 694,315 + BT0558 0.55 -1.7 694,315 + BT0558 0.55 -1.9 694,357 - BT0558 0.59 +1.0 694,376 + BT0558 0.61 -2.6 694,427 - BT0558 0.66 -1.9 694,596 + BT0558 0.82 -1.0 694,663 - BT0558 0.88 -4.3 694,705 + +1.0 694,707 + +1.0 694,707 + -2.4 694,883 - BT0559 0.11 -0.0 694,934 - BT0559 0.16 -0.2 694,987 + BT0559 0.22 +1.5 694,988 - BT0559 0.22 -0.6 695,001 - BT0559 0.24 -2.1 695,031 - BT0559 0.27 -0.0 695,059 - BT0559 0.30 +0.2 695,148 + BT0559 0.40 -2.7 695,151 - BT0559 0.40 -0.0 695,151 - BT0559 0.40 -1.9 695,151 - BT0559 0.40 -0.0 695,160 + BT0559 0.41 -1.4 695,160 + BT0559 0.41 -0.0 695,168 - BT0559 0.42 +1.0 695,437 - BT0559 0.72 +0.1 695,551 - BT0559 0.85 -1.0 695,628 + -1.4 695,776 - -1.6
Or see this region's nucleotide sequence