Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0521 and Synpcc7942_0522 are separated by 518 nucleotides Synpcc7942_0522 and Synpcc7942_0523 are separated by 1 nucleotides Synpcc7942_0523 and Synpcc7942_0524 are separated by 91 nucleotides Synpcc7942_0524 and aroB are separated by 23 nucleotides
Synpcc7942_0521: Synpcc7942_0521 - hypothetical protein, at 506,835 to 507,422
_0521
Synpcc7942_0522: Synpcc7942_0522 - hypothetical protein, at 507,941 to 508,312
_0522
Synpcc7942_0523: Synpcc7942_0523 - hypothetical protein, at 508,314 to 508,703
_0523
Synpcc7942_0524: Synpcc7942_0524 - hypothetical protein, at 508,795 to 509,202
_0524
Synpcc7942_0525: aroB - 3-dehydroquinate synthase, at 509,226 to 510,332
aroB
Position (kb) 508
509 Strain fitness (log2 ratio) -2
-1
0
1
2 at 507.327 kb on - strand, within Synpcc7942_0521 at 507.330 kb on - strand, within Synpcc7942_0521 at 507.344 kb on + strand, within Synpcc7942_0521 at 507.344 kb on + strand, within Synpcc7942_0521 at 507.353 kb on + strand, within Synpcc7942_0521 at 507.354 kb on + strand, within Synpcc7942_0521 at 507.354 kb on + strand, within Synpcc7942_0521 at 507.371 kb on + strand at 507.379 kb on - strand at 507.386 kb on - strand at 507.386 kb on - strand at 507.393 kb on + strand at 507.549 kb on - strand at 507.559 kb on - strand at 507.618 kb on + strand at 507.719 kb on + strand at 507.727 kb on - strand at 507.727 kb on - strand at 507.727 kb on - strand at 507.727 kb on - strand at 507.745 kb on + strand at 507.755 kb on + strand at 507.755 kb on + strand at 507.763 kb on - strand at 507.836 kb on + strand at 507.989 kb on + strand, within Synpcc7942_0522 at 507.997 kb on - strand, within Synpcc7942_0522 at 507.997 kb on - strand, within Synpcc7942_0522 at 507.997 kb on - strand, within Synpcc7942_0522 at 508.018 kb on + strand, within Synpcc7942_0522 at 508.032 kb on + strand, within Synpcc7942_0522 at 508.032 kb on + strand, within Synpcc7942_0522 at 508.042 kb on + strand, within Synpcc7942_0522 at 508.072 kb on + strand, within Synpcc7942_0522 at 508.078 kb on - strand, within Synpcc7942_0522 at 508.089 kb on + strand, within Synpcc7942_0522 at 508.098 kb on + strand, within Synpcc7942_0522 at 508.098 kb on - strand, within Synpcc7942_0522 at 508.108 kb on + strand, within Synpcc7942_0522 at 508.116 kb on + strand, within Synpcc7942_0522 at 508.116 kb on + strand, within Synpcc7942_0522 at 508.116 kb on - strand, within Synpcc7942_0522 at 508.124 kb on - strand, within Synpcc7942_0522 at 508.124 kb on - strand, within Synpcc7942_0522 at 508.149 kb on - strand, within Synpcc7942_0522 at 508.216 kb on - strand, within Synpcc7942_0522 at 508.248 kb on - strand, within Synpcc7942_0522 at 508.253 kb on + strand, within Synpcc7942_0522 at 508.346 kb on + strand at 508.386 kb on + strand, within Synpcc7942_0523 at 508.386 kb on + strand, within Synpcc7942_0523 at 508.386 kb on + strand, within Synpcc7942_0523 at 508.386 kb on + strand, within Synpcc7942_0523 at 508.394 kb on - strand, within Synpcc7942_0523 at 508.394 kb on - strand, within Synpcc7942_0523 at 508.394 kb on - strand, within Synpcc7942_0523 at 508.394 kb on - strand, within Synpcc7942_0523 at 508.394 kb on - strand, within Synpcc7942_0523 at 508.394 kb on - strand, within Synpcc7942_0523 at 508.394 kb on - strand at 508.399 kb on + strand, within Synpcc7942_0523 at 508.411 kb on - strand, within Synpcc7942_0523 at 508.418 kb on - strand, within Synpcc7942_0523 at 508.431 kb on + strand, within Synpcc7942_0523 at 508.454 kb on + strand, within Synpcc7942_0523 at 508.474 kb on + strand, within Synpcc7942_0523 at 508.482 kb on - strand, within Synpcc7942_0523 at 508.482 kb on - strand, within Synpcc7942_0523 at 508.546 kb on - strand, within Synpcc7942_0523 at 508.605 kb on + strand, within Synpcc7942_0523 at 508.605 kb on + strand, within Synpcc7942_0523 at 508.626 kb on - strand, within Synpcc7942_0523 at 508.660 kb on - strand, within Synpcc7942_0523 at 508.660 kb on - strand, within Synpcc7942_0523 at 508.660 kb on - strand at 508.711 kb on + strand at 508.717 kb on - strand at 508.758 kb on + strand at 508.758 kb on + strand at 508.758 kb on + strand at 508.758 kb on + strand at 508.766 kb on - strand at 508.766 kb on - strand at 508.766 kb on - strand at 508.766 kb on - strand at 508.810 kb on - strand at 508.855 kb on - strand, within Synpcc7942_0524 at 508.855 kb on - strand, within Synpcc7942_0524 at 508.885 kb on + strand, within Synpcc7942_0524 at 508.910 kb on - strand, within Synpcc7942_0524 at 508.910 kb on - strand, within Synpcc7942_0524 at 508.919 kb on + strand, within Synpcc7942_0524 at 508.927 kb on - strand, within Synpcc7942_0524 at 508.927 kb on - strand, within Synpcc7942_0524 at 508.934 kb on + strand, within Synpcc7942_0524 at 508.966 kb on + strand, within Synpcc7942_0524 at 509.019 kb on - strand, within Synpcc7942_0524 at 509.024 kb on + strand, within Synpcc7942_0524 at 509.079 kb on + strand, within Synpcc7942_0524 at 509.103 kb on - strand, within Synpcc7942_0524 at 509.120 kb on + strand, within Synpcc7942_0524 at 509.120 kb on + strand, within Synpcc7942_0524 at 509.120 kb on + strand, within Synpcc7942_0524 at 509.128 kb on - strand, within Synpcc7942_0524 at 509.130 kb on - strand, within Synpcc7942_0524 at 509.143 kb on - strand, within Synpcc7942_0524 at 509.153 kb on + strand, within Synpcc7942_0524 at 509.154 kb on + strand, within Synpcc7942_0524 at 509.190 kb on + strand at 509.207 kb on - strand at 509.222 kb on + strand at 509.223 kb on + strand at 509.223 kb on + strand at 509.223 kb on + strand at 509.223 kb on + strand at 509.223 kb on + strand at 509.224 kb on + strand at 509.230 kb on - strand at 509.231 kb on - strand at 509.231 kb on - strand at 509.232 kb on - strand at 509.232 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 507,327 - Synpcc7942_0521 0.84 +1.1 507,330 - Synpcc7942_0521 0.84 +1.8 507,344 + Synpcc7942_0521 0.87 -0.2 507,344 + Synpcc7942_0521 0.87 -0.3 507,353 + Synpcc7942_0521 0.88 -1.4 507,354 + Synpcc7942_0521 0.88 +0.9 507,354 + Synpcc7942_0521 0.88 +0.9 507,371 + +1.7 507,379 - +1.2 507,386 - +0.3 507,386 - +1.3 507,393 + -0.4 507,549 - -0.4 507,559 - +1.0 507,618 + +1.2 507,719 + +2.1 507,727 - +0.9 507,727 - +1.7 507,727 - -0.4 507,727 - +1.5 507,745 + +1.1 507,755 + -0.1 507,755 + -1.7 507,763 - +0.3 507,836 + +0.1 507,989 + Synpcc7942_0522 0.13 -0.3 507,997 - Synpcc7942_0522 0.15 -0.6 507,997 - Synpcc7942_0522 0.15 -0.9 507,997 - Synpcc7942_0522 0.15 +1.9 508,018 + Synpcc7942_0522 0.21 -0.4 508,032 + Synpcc7942_0522 0.24 +0.2 508,032 + Synpcc7942_0522 0.24 +2.4 508,042 + Synpcc7942_0522 0.27 +1.5 508,072 + Synpcc7942_0522 0.35 -0.5 508,078 - Synpcc7942_0522 0.37 +2.7 508,089 + Synpcc7942_0522 0.40 +0.8 508,098 + Synpcc7942_0522 0.42 +0.9 508,098 - Synpcc7942_0522 0.42 +1.3 508,108 + Synpcc7942_0522 0.45 -0.6 508,116 + Synpcc7942_0522 0.47 -0.6 508,116 + Synpcc7942_0522 0.47 +1.2 508,116 - Synpcc7942_0522 0.47 +1.9 508,124 - Synpcc7942_0522 0.49 -2.5 508,124 - Synpcc7942_0522 0.49 -0.5 508,149 - Synpcc7942_0522 0.56 +1.4 508,216 - Synpcc7942_0522 0.74 +0.2 508,248 - Synpcc7942_0522 0.83 +1.1 508,253 + Synpcc7942_0522 0.84 -1.5 508,346 + -0.2 508,386 + Synpcc7942_0523 0.18 +1.1 508,386 + Synpcc7942_0523 0.18 -1.1 508,386 + Synpcc7942_0523 0.18 +1.9 508,386 + Synpcc7942_0523 0.18 +2.3 508,394 - Synpcc7942_0523 0.21 -0.9 508,394 - Synpcc7942_0523 0.21 +1.5 508,394 - Synpcc7942_0523 0.21 +0.5 508,394 - Synpcc7942_0523 0.21 +1.2 508,394 - Synpcc7942_0523 0.21 +0.1 508,394 - Synpcc7942_0523 0.21 -1.9 508,394 - +1.1 508,399 + Synpcc7942_0523 0.22 +0.0 508,411 - Synpcc7942_0523 0.25 +1.9 508,418 - Synpcc7942_0523 0.27 -0.1 508,431 + Synpcc7942_0523 0.30 +1.0 508,454 + Synpcc7942_0523 0.36 +1.0 508,474 + Synpcc7942_0523 0.41 -0.7 508,482 - Synpcc7942_0523 0.43 +0.8 508,482 - Synpcc7942_0523 0.43 -1.2 508,546 - Synpcc7942_0523 0.59 +0.3 508,605 + Synpcc7942_0523 0.75 -0.5 508,605 + Synpcc7942_0523 0.75 -0.8 508,626 - Synpcc7942_0523 0.80 -0.7 508,660 - Synpcc7942_0523 0.89 +1.7 508,660 - Synpcc7942_0523 0.89 -0.2 508,660 - +1.7 508,711 + -1.5 508,717 - +0.8 508,758 + +0.5 508,758 + +1.1 508,758 + -0.4 508,758 + -1.2 508,766 - -0.3 508,766 - -0.7 508,766 - -0.4 508,766 - -1.5 508,810 - +0.5 508,855 - Synpcc7942_0524 0.15 -1.3 508,855 - Synpcc7942_0524 0.15 -0.6 508,885 + Synpcc7942_0524 0.22 +0.6 508,910 - Synpcc7942_0524 0.28 +1.0 508,910 - Synpcc7942_0524 0.28 -0.8 508,919 + Synpcc7942_0524 0.30 -0.7 508,927 - Synpcc7942_0524 0.32 -1.1 508,927 - Synpcc7942_0524 0.32 +1.6 508,934 + Synpcc7942_0524 0.34 -1.8 508,966 + Synpcc7942_0524 0.42 -0.8 509,019 - Synpcc7942_0524 0.55 +0.2 509,024 + Synpcc7942_0524 0.56 +1.7 509,079 + Synpcc7942_0524 0.70 +1.9 509,103 - Synpcc7942_0524 0.75 -0.7 509,120 + Synpcc7942_0524 0.80 -0.8 509,120 + Synpcc7942_0524 0.80 +1.5 509,120 + Synpcc7942_0524 0.80 -1.1 509,128 - Synpcc7942_0524 0.82 -0.5 509,130 - Synpcc7942_0524 0.82 -0.9 509,143 - Synpcc7942_0524 0.85 +1.2 509,153 + Synpcc7942_0524 0.88 -1.5 509,154 + Synpcc7942_0524 0.88 -0.3 509,190 + -1.0 509,207 - -1.0 509,222 + -1.3 509,223 + -1.3 509,223 + +1.3 509,223 + +0.6 509,223 + -2.6 509,223 + -0.4 509,224 + +0.1 509,230 - -1.2 509,231 - -1.9 509,231 - +1.2 509,232 - -0.9 509,232 - +0.9
Or see this region's nucleotide sequence