Experiment: Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3199 and Pf6N2E2_6116 are separated by 108 nucleotides Pf6N2E2_6116 and Pf6N2E2_3200 are separated by 789 nucleotides
Pf6N2E2_3199 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-), at 3,692,704 to 3,693,753
_3199
Pf6N2E2_6116 - tRNA-Leu-CAA, at 3,693,862 to 3,693,943
_6116
Pf6N2E2_3200 - Putative membrane protein, at 3,694,733 to 3,698,722
_3200
Position (kb)
3694
3695
3696
3697
3698
3699 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3694.092 kb on - strand at 3694.092 kb on - strand at 3694.092 kb on - strand at 3694.094 kb on + strand at 3694.094 kb on + strand at 3694.094 kb on + strand at 3694.283 kb on + strand at 3694.283 kb on + strand at 3694.284 kb on - strand at 3694.300 kb on + strand at 3694.301 kb on - strand at 3694.397 kb on - strand at 3694.467 kb on + strand at 3694.467 kb on + strand at 3694.467 kb on + strand at 3694.527 kb on + strand at 3694.530 kb on + strand at 3694.531 kb on - strand at 3694.544 kb on + strand at 3694.545 kb on - strand at 3694.664 kb on + strand at 3694.716 kb on + strand at 3694.723 kb on + strand at 3694.803 kb on + strand at 3694.830 kb on + strand at 3694.880 kb on + strand at 3694.884 kb on + strand at 3694.884 kb on + strand at 3694.885 kb on - strand at 3694.885 kb on - strand at 3694.885 kb on - strand at 3694.885 kb on - strand at 3694.898 kb on - strand at 3695.075 kb on - strand at 3695.128 kb on - strand at 3695.282 kb on + strand, within Pf6N2E2_3200 at 3695.283 kb on - strand, within Pf6N2E2_3200 at 3695.283 kb on - strand, within Pf6N2E2_3200 at 3695.370 kb on + strand, within Pf6N2E2_3200 at 3695.740 kb on - strand, within Pf6N2E2_3200 at 3695.773 kb on - strand, within Pf6N2E2_3200 at 3696.417 kb on + strand, within Pf6N2E2_3200 at 3696.832 kb on + strand, within Pf6N2E2_3200 at 3696.939 kb on + strand, within Pf6N2E2_3200 at 3697.043 kb on + strand, within Pf6N2E2_3200 at 3697.200 kb on + strand, within Pf6N2E2_3200 at 3697.367 kb on + strand, within Pf6N2E2_3200 at 3697.376 kb on + strand, within Pf6N2E2_3200 at 3697.602 kb on + strand, within Pf6N2E2_3200 at 3697.603 kb on - strand, within Pf6N2E2_3200 at 3697.608 kb on + strand, within Pf6N2E2_3200 at 3697.957 kb on - strand, within Pf6N2E2_3200 at 3697.957 kb on - strand, within Pf6N2E2_3200 at 3698.084 kb on - strand, within Pf6N2E2_3200 at 3698.084 kb on - strand, within Pf6N2E2_3200 at 3698.132 kb on + strand, within Pf6N2E2_3200 at 3698.263 kb on - strand, within Pf6N2E2_3200 at 3698.378 kb on - strand at 3698.605 kb on - strand at 3698.711 kb on - strand at 3698.738 kb on + strand at 3698.901 kb on - strand at 3699.015 kb on - strand at 3699.015 kb on - strand at 3699.024 kb on - strand at 3699.169 kb on - strand at 3699.180 kb on - strand at 3699.190 kb on - strand at 3699.241 kb on - strand at 3699.451 kb on + strand at 3699.460 kb on + strand at 3699.460 kb on + strand at 3699.486 kb on + strand at 3699.567 kb on + strand at 3699.687 kb on + strand at 3699.687 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 500 mM remove 3,694,092 - +0.6 3,694,092 - -0.0 3,694,092 - +0.1 3,694,094 + -0.5 3,694,094 + -0.1 3,694,094 + +1.1 3,694,283 + -0.1 3,694,283 + -0.1 3,694,284 - +0.7 3,694,300 + +2.9 3,694,301 - -0.6 3,694,397 - +0.5 3,694,467 + +0.6 3,694,467 + -0.8 3,694,467 + +0.7 3,694,527 + -0.2 3,694,530 + -0.1 3,694,531 - +0.3 3,694,544 + -1.1 3,694,545 - -0.2 3,694,664 + -0.5 3,694,716 + +0.6 3,694,723 + -1.2 3,694,803 + -0.2 3,694,830 + -2.7 3,694,880 + +0.9 3,694,884 + +0.3 3,694,884 + -1.5 3,694,885 - -0.0 3,694,885 - +0.2 3,694,885 - -0.3 3,694,885 - -0.7 3,694,898 - -0.1 3,695,075 - +1.9 3,695,128 - +0.9 3,695,282 + Pf6N2E2_3200 0.14 +0.0 3,695,283 - Pf6N2E2_3200 0.14 +1.3 3,695,283 - Pf6N2E2_3200 0.14 +0.7 3,695,370 + Pf6N2E2_3200 0.16 +0.9 3,695,740 - Pf6N2E2_3200 0.25 +0.3 3,695,773 - Pf6N2E2_3200 0.26 -0.9 3,696,417 + Pf6N2E2_3200 0.42 +1.7 3,696,832 + Pf6N2E2_3200 0.53 -0.2 3,696,939 + Pf6N2E2_3200 0.55 +0.3 3,697,043 + Pf6N2E2_3200 0.58 +1.0 3,697,200 + Pf6N2E2_3200 0.62 +1.1 3,697,367 + Pf6N2E2_3200 0.66 +1.1 3,697,376 + Pf6N2E2_3200 0.66 -1.1 3,697,602 + Pf6N2E2_3200 0.72 -0.1 3,697,603 - Pf6N2E2_3200 0.72 +1.4 3,697,608 + Pf6N2E2_3200 0.72 +0.8 3,697,957 - Pf6N2E2_3200 0.81 +0.6 3,697,957 - Pf6N2E2_3200 0.81 +0.4 3,698,084 - Pf6N2E2_3200 0.84 -0.0 3,698,084 - Pf6N2E2_3200 0.84 -0.7 3,698,132 + Pf6N2E2_3200 0.85 +0.6 3,698,263 - Pf6N2E2_3200 0.88 -0.1 3,698,378 - -0.8 3,698,605 - -0.6 3,698,711 - +0.5 3,698,738 + +1.0 3,698,901 - +0.0 3,699,015 - +0.8 3,699,015 - -0.5 3,699,024 - +0.5 3,699,169 - +0.3 3,699,180 - -1.7 3,699,190 - +0.6 3,699,241 - -0.2 3,699,451 + -0.0 3,699,460 + +0.6 3,699,460 + -0.3 3,699,486 + -1.1 3,699,567 + -1.0 3,699,687 + -0.3 3,699,687 + -2.3
Or see this region's nucleotide sequence