Experiment: Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_315 and Pf6N2E2_316 are separated by 294 nucleotides Pf6N2E2_316 and Pf6N2E2_317 are separated by 242 nucleotides
Pf6N2E2_315 - probable transmembrane protein, at 381,857 to 382,717
_315
Pf6N2E2_316 - membrane protein, putative, at 383,012 to 383,977
_316
Pf6N2E2_317 - Signal transduction histidine kinase, at 384,220 to 385,350
_317
Position (kb) 383
384 Strain fitness (log2 ratio) -2
-1
0
1 at 382.042 kb on + strand, within Pf6N2E2_315 at 382.043 kb on - strand, within Pf6N2E2_315 at 382.043 kb on - strand, within Pf6N2E2_315 at 382.043 kb on - strand, within Pf6N2E2_315 at 382.262 kb on - strand, within Pf6N2E2_315 at 382.359 kb on + strand, within Pf6N2E2_315 at 382.360 kb on - strand, within Pf6N2E2_315 at 382.360 kb on - strand, within Pf6N2E2_315 at 382.655 kb on + strand at 382.864 kb on + strand at 382.864 kb on + strand at 382.865 kb on - strand at 383.062 kb on - strand at 383.062 kb on - strand at 383.072 kb on + strand at 383.072 kb on + strand at 383.073 kb on - strand at 383.686 kb on - strand, within Pf6N2E2_316 at 383.715 kb on - strand, within Pf6N2E2_316 at 383.780 kb on + strand, within Pf6N2E2_316 at 383.781 kb on - strand, within Pf6N2E2_316 at 383.781 kb on - strand, within Pf6N2E2_316 at 383.781 kb on - strand, within Pf6N2E2_316 at 383.837 kb on + strand, within Pf6N2E2_316 at 384.072 kb on - strand at 384.076 kb on + strand at 384.085 kb on - strand at 384.126 kb on - strand at 384.126 kb on - strand at 384.166 kb on - strand at 384.166 kb on - strand at 384.166 kb on - strand at 384.191 kb on + strand at 384.191 kb on + strand at 384.540 kb on + strand, within Pf6N2E2_317 at 384.540 kb on + strand, within Pf6N2E2_317 at 384.540 kb on + strand, within Pf6N2E2_317 at 384.540 kb on + strand, within Pf6N2E2_317 at 384.541 kb on - strand, within Pf6N2E2_317 at 384.646 kb on + strand, within Pf6N2E2_317 at 384.675 kb on + strand, within Pf6N2E2_317 at 384.676 kb on - strand, within Pf6N2E2_317 at 384.799 kb on + strand, within Pf6N2E2_317 at 384.799 kb on + strand, within Pf6N2E2_317 at 384.921 kb on + strand, within Pf6N2E2_317 at 384.922 kb on - strand, within Pf6N2E2_317 at 384.922 kb on - strand, within Pf6N2E2_317 at 384.922 kb on - strand, within Pf6N2E2_317 at 384.943 kb on + strand, within Pf6N2E2_317 at 384.943 kb on + strand, within Pf6N2E2_317
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 500 mM remove 382,042 + Pf6N2E2_315 0.21 -0.4 382,043 - Pf6N2E2_315 0.22 -0.7 382,043 - Pf6N2E2_315 0.22 +0.3 382,043 - Pf6N2E2_315 0.22 +0.3 382,262 - Pf6N2E2_315 0.47 -0.4 382,359 + Pf6N2E2_315 0.58 -0.4 382,360 - Pf6N2E2_315 0.58 -1.0 382,360 - Pf6N2E2_315 0.58 +0.4 382,655 + +0.2 382,864 + -1.1 382,864 + +0.0 382,865 - +1.2 383,062 - -0.1 383,062 - +1.7 383,072 + -0.2 383,072 + +0.8 383,073 - -0.4 383,686 - Pf6N2E2_316 0.70 -0.3 383,715 - Pf6N2E2_316 0.73 -0.2 383,780 + Pf6N2E2_316 0.80 -0.6 383,781 - Pf6N2E2_316 0.80 -0.9 383,781 - Pf6N2E2_316 0.80 -0.3 383,781 - Pf6N2E2_316 0.80 -1.8 383,837 + Pf6N2E2_316 0.85 -1.3 384,072 - +1.5 384,076 + -0.6 384,085 - +1.2 384,126 - -1.0 384,126 - +1.5 384,166 - +0.1 384,166 - +0.3 384,166 - -0.4 384,191 + -0.7 384,191 + +1.0 384,540 + Pf6N2E2_317 0.28 +0.4 384,540 + Pf6N2E2_317 0.28 +0.7 384,540 + Pf6N2E2_317 0.28 -0.3 384,540 + Pf6N2E2_317 0.28 +0.2 384,541 - Pf6N2E2_317 0.28 +1.0 384,646 + Pf6N2E2_317 0.38 -1.4 384,675 + Pf6N2E2_317 0.40 +0.6 384,676 - Pf6N2E2_317 0.40 -0.4 384,799 + Pf6N2E2_317 0.51 -0.2 384,799 + Pf6N2E2_317 0.51 +0.3 384,921 + Pf6N2E2_317 0.62 -0.6 384,922 - Pf6N2E2_317 0.62 -1.2 384,922 - Pf6N2E2_317 0.62 -1.7 384,922 - Pf6N2E2_317 0.62 +0.1 384,943 + Pf6N2E2_317 0.64 -1.6 384,943 + Pf6N2E2_317 0.64 +0.6
Or see this region's nucleotide sequence