Strain Fitness in Pantoea sp. MT58 around IAI47_19570

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
141,809	+				+3.4
141,809	+				+1.0
141,827	-				+0.0
141,870	+				+1.8
141,875	+				+3.9
141,913	+				+1.8
141,913	+				+0.4
141,913	+				-0.9
141,941	+				+0.0
141,954	+				+0.4
141,954	+				+0.9
141,954	+				+0.9
141,955	-				-0.4
141,955	-				+0.0
141,955	-				-0.1
141,971	+				-0.2
141,971	+				+1.1
141,972	-				-0.1
141,998	-				-0.6
142,011	+				+0.8
142,011	+				-0.9
142,011	+				+0.8
142,012	-				-1.5
142,012	-				+0.3
142,070	+				+1.3
142,108	-				-1.3
142,116	+				-0.6
142,130	+				+2.3
142,130	+				+1.6
142,131	-				+1.7
142,161	+				+0.5
142,175	+				-0.2
142,175	+				+0.9
142,176	-				+0.3
142,241	-				-0.1
142,241	-				+0.0
142,310	+		IAI47_19565	0.13	+0.3
142,310	+		IAI47_19565	0.13	+2.1
142,311	-		IAI47_19565	0.13	+0.7
142,312	+		IAI47_19565	0.13	+0.7
142,312	+		IAI47_19565	0.13	+0.7
142,312	+		IAI47_19565	0.13	+0.9
142,312	+		IAI47_19565	0.13	-0.1
142,313	-		IAI47_19565	0.13	+0.3
142,313	-		IAI47_19565	0.13	-0.8
142,313	-		IAI47_19565	0.13	-0.4
142,313	-		IAI47_19565	0.13	-0.3
142,316	+		IAI47_19565	0.14	+2.3
142,316	+		IAI47_19565	0.14	+1.7
142,316	+		IAI47_19565	0.14	-0.2
142,316	+		IAI47_19565	0.14	+1.1
142,316	+		IAI47_19565	0.14	-1.0
142,316	+		IAI47_19565	0.14	+2.8
142,316	+		IAI47_19565	0.14	+0.6
142,317	-		IAI47_19565	0.14	+0.7
142,335	-		IAI47_19565	0.17	-1.2
142,335	-		IAI47_19565	0.17	+0.7
142,343	+		IAI47_19565	0.19	-0.4
142,343	+		IAI47_19565	0.19	+1.1
142,343	+		IAI47_19565	0.19	-0.3
142,344	-		IAI47_19565	0.19	+1.4
142,344	-		IAI47_19565	0.19	-1.1
142,344	-		IAI47_19565	0.19	+0.4
142,360	+		IAI47_19565	0.22	+0.6
142,361	-		IAI47_19565	0.22	-0.9
142,370	+		IAI47_19565	0.24	+0.7
142,391	+		IAI47_19565	0.28	+0.3
142,392	+		IAI47_19565	0.28	+1.5
142,451	+		IAI47_19565	0.39	+0.3
142,451	+		IAI47_19565	0.39	+0.6
142,451	+		IAI47_19565	0.39	+1.4
142,475	-		IAI47_19565	0.44	+2.1
142,475	-		IAI47_19565	0.44	+0.1
142,589	+		IAI47_19565	0.66	+0.3
142,589	+		IAI47_19565	0.66	-0.4
142,590	-		IAI47_19565	0.66	-1.6
142,603	+		IAI47_19565	0.68	-0.6
142,612	+		IAI47_19565	0.70	+2.7
142,612	+		IAI47_19565	0.70	-0.1
142,612	+		IAI47_19565	0.70	-0.6
142,612	+		IAI47_19565	0.70	+1.4
142,612	+		IAI47_19565	0.70	+0.4
142,612	+		IAI47_19565	0.70	-1.2
142,612	+		IAI47_19565	0.70	+0.1
142,613	-		IAI47_19565	0.70	-1.6
142,613	-		IAI47_19565	0.70	+0.4
142,613	-		IAI47_19565	0.70	-1.9
142,649	+		IAI47_19565	0.77	-0.3
142,650	-		IAI47_19565	0.77	-0.3
142,650	-		IAI47_19565	0.77	-0.4
142,650	-		IAI47_19565	0.77	-0.9
142,650	-		IAI47_19565	0.77	+0.1
142,657	+		IAI47_19565	0.79	+0.2
142,658	-		IAI47_19565	0.79	-0.6
142,658	-		IAI47_19565	0.79	+0.6
142,658	-		IAI47_19565	0.79	-1.7
142,658	-		IAI47_19565	0.79	-0.2
142,658	-		IAI47_19565	0.79	+0.9
142,682	+		IAI47_19565	0.83	+4.2
142,682	+		IAI47_19565	0.83	+1.6
142,682	+		IAI47_19565	0.83	-0.1
142,682	+		IAI47_19565	0.83	-0.5
142,683	-		IAI47_19565	0.84	-1.8
142,683	-		IAI47_19565	0.84	-0.1
142,683	-		IAI47_19565	0.84	+0.1
142,711	+		IAI47_19565	0.89	+0.1
142,711	+		IAI47_19565	0.89	+0.0
142,712	-		IAI47_19565	0.89	+1.4
142,716	+				+2.1
142,716	+				-0.4
142,717	-				+0.4
142,762	+				+0.3
142,762	+				+0.7
142,762	+				+1.0
142,763	-				+0.6
142,763	-				-0.6
142,766	+				-0.3
142,766	+				+0.9
142,766	+				+1.1
142,766	+				+0.4
142,766	+				+1.1
142,767	-				+0.4
142,767	-				+1.4
142,767	-				+0.3
142,767	-				+0.6
142,770	+				+1.2
142,770	+				+2.4
142,771	-				-0.7
142,771	-				+0.6
142,836	+				+0.6
142,836	+				-1.1
142,837	-				-1.4
142,837	-				-1.0
142,837	-				-0.4
142,844	+				-1.1
142,844	+				+0.1
142,845	-				+2.0
142,845	-				+1.4
142,896	+				+0.4
142,896	+				-0.5
142,896	+				-0.4
142,897	-				+2.7
142,897	-				-1.4
142,897	-				+0.1
142,912	+				-0.2
142,912	+				+2.1
142,913	-				-0.2
142,923	-				+0.9
142,923	-				+2.0
142,923	-				+0.6
142,923	-				+0.1
142,923	-				-0.6
142,923	-				+2.1
142,923	-				-0.7
142,926	+		IAI47_19570	0.10	+0.7
142,926	+		IAI47_19570	0.10	+0.8
142,926	+		IAI47_19570	0.10	+0.6
142,926	+		IAI47_19570	0.10	+0.3
142,926	+		IAI47_19570	0.10	+0.4
142,926	+		IAI47_19570	0.10	+0.1
142,926	+		IAI47_19570	0.10	+0.3
142,927	-		IAI47_19570	0.10	-1.2
142,927	-		IAI47_19570	0.10	-1.3
142,927	-		IAI47_19570	0.10	-0.5
142,972	+		IAI47_19570	0.13	-0.5
143,033	+		IAI47_19570	0.18	-0.9
143,033	+		IAI47_19570	0.18	-0.4
143,034	-		IAI47_19570	0.18	+0.6
143,080	+		IAI47_19570	0.21	-0.6
143,080	+		IAI47_19570	0.21	-0.2
143,081	-		IAI47_19570	0.21	-0.8
143,081	-		IAI47_19570	0.21	-0.8
143,081	-		IAI47_19570	0.21	+1.4
143,089	+		IAI47_19570	0.22	+0.7
143,113	-		IAI47_19570	0.23	+0.5
143,172	+		IAI47_19570	0.28	+1.8
143,173	-		IAI47_19570	0.28	+1.4
143,173	-		IAI47_19570	0.28	-0.3
143,303	-		IAI47_19570	0.37	-0.5
143,320	-		IAI47_19570	0.38	-0.7
143,360	-		IAI47_19570	0.41	+0.8
143,360	-		IAI47_19570	0.41	-0.2
143,370	+		IAI47_19570	0.42	+1.4
143,371	-		IAI47_19570	0.42	+1.3
143,371	-		IAI47_19570	0.42	+0.9
143,374	+		IAI47_19570	0.42	-0.9
143,374	+		IAI47_19570	0.42	-0.4
143,374	+		IAI47_19570	0.42	-1.3
143,375	-		IAI47_19570	0.42	+0.0
143,388	+		IAI47_19570	0.43	+1.1
143,407	+		IAI47_19570	0.45	+0.6
143,408	-		IAI47_19570	0.45	+1.1
143,408	-		IAI47_19570	0.45	+0.7
143,408	-		IAI47_19570	0.45	+0.7
143,414	+		IAI47_19570	0.45	+0.3
143,414	+		IAI47_19570	0.45	-1.1
143,415	-		IAI47_19570	0.45	+1.4
143,486	+		IAI47_19570	0.50	-0.8
143,521	-		IAI47_19570	0.53	+1.9
143,550	-		IAI47_19570	0.55	+1.3
143,580	+		IAI47_19570	0.57	-0.6
143,581	-		IAI47_19570	0.57	+1.3
143,652	+		IAI47_19570	0.62	-1.9
143,652	+		IAI47_19570	0.62	-0.2
143,653	-		IAI47_19570	0.62	+0.8
143,653	-		IAI47_19570	0.62	+0.4
143,653	-		IAI47_19570	0.62	+0.6
143,653	-		IAI47_19570	0.62	+1.5
143,653	-		IAI47_19570	0.62	+1.3
143,653	-		IAI47_19570	0.62	+1.8
143,667	+		IAI47_19570	0.63	+1.0
143,685	+		IAI47_19570	0.65	-1.4
143,686	-		IAI47_19570	0.65	+1.7
143,704	+		IAI47_19570	0.66	+0.6
143,704	+		IAI47_19570	0.66	-1.8
143,704	+		IAI47_19570	0.66	+0.3
143,704	+		IAI47_19570	0.66	+0.9
143,704	+		IAI47_19570	0.66	+1.4
143,704	+		IAI47_19570	0.66	+0.6
143,704	+		IAI47_19570	0.66	+0.3
143,705	-		IAI47_19570	0.66	+2.2
143,705	-		IAI47_19570	0.66	-0.7
143,705	-		IAI47_19570	0.66	+1.1
143,705	-		IAI47_19570	0.66	-0.2
143,705	-		IAI47_19570	0.66	+0.4
143,705	-		IAI47_19570	0.66	+0.6
143,705	-		IAI47_19570	0.66	+0.7
143,705	-		IAI47_19570	0.66	+2.7
143,705	-		IAI47_19570	0.66	-0.2
143,723	-		IAI47_19570	0.67	-0.4
143,723	-		IAI47_19570	0.67	+0.9
143,723	-		IAI47_19570	0.67	-0.9
143,821	+		IAI47_19570	0.74	+0.1
143,821	+		IAI47_19570	0.74	+0.1
143,821	+		IAI47_19570	0.74	-0.2
143,821	+		IAI47_19570	0.74	-1.2
143,822	-		IAI47_19570	0.74	+0.1
143,822	-		IAI47_19570	0.74	+0.3
143,822	-		IAI47_19570	0.74	+0.7
143,822	-		IAI47_19570	0.74	+0.0
143,822	-		IAI47_19570	0.74	+1.5
143,879	+		IAI47_19570	0.79	+0.6
143,880	-		IAI47_19570	0.79	-0.1
143,880	-		IAI47_19570	0.79	+1.5
143,943	-		IAI47_19570	0.83	-0.3
143,943	-		IAI47_19570	0.83	+2.3
143,947	+		IAI47_19570	0.83	+0.9
143,947	+		IAI47_19570	0.83	-0.4
143,948	-		IAI47_19570	0.83	+2.7
143,959	+		IAI47_19570	0.84	+0.4
143,959	+		IAI47_19570	0.84	+0.1
143,959	+		IAI47_19570	0.84	+0.9
143,959	+		IAI47_19570	0.84	-0.3
143,960	-		IAI47_19570	0.84	+1.7
143,960	-		IAI47_19570	0.84	+0.6
143,960	-		IAI47_19570	0.84	+1.5
143,960	-		IAI47_19570	0.84	+1.6
143,960	-		IAI47_19570	0.84	+0.0
143,960	-		IAI47_19570	0.84	+0.6
144,090	+				+0.8
144,090	+				-0.3
144,098	+				-0.4
144,098	+				-0.6
144,149	+				-0.3
144,149	+				+1.0
144,149	+				+0.9
144,150	-				+2.3
144,150	-				+1.3
144,150	-				+1.5
144,150	-				+2.6
144,178	+				+0.3
144,178	+				+0.1
144,178	+				+0.7
144,178	+				+0.3
144,179	-				+1.7
144,216	-				+1.3
144,225	+				-0.1
144,226	-				-0.0
144,226	-				+1.1
144,273	-				+0.3
144,361	+		IAI47_19575	0.29	+1.1
144,361	+		IAI47_19575	0.29	+0.9
144,361	+		IAI47_19575	0.29	+1.6
144,362	-		IAI47_19575	0.29	-0.2
144,362	-		IAI47_19575	0.29	+0.4
144,362	-		IAI47_19575	0.29	+0.7
144,402	+		IAI47_19575	0.42	+1.7
144,402	+		IAI47_19575	0.42	+0.1
144,402	+		IAI47_19575	0.42	+0.8
144,402	+		IAI47_19575	0.42	+1.7
144,402	+		IAI47_19575	0.42	-0.5
144,403	-		IAI47_19575	0.43	+1.1
144,430	+		IAI47_19575	0.51	+2.1
144,442	+		IAI47_19575	0.55	+0.9
144,443	-		IAI47_19575	0.56	+3.3
144,472	+		IAI47_19575	0.65	+3.1
144,473	-		IAI47_19575	0.65	+0.7
144,509	+		IAI47_19575	0.77	+2.0
144,510	-		IAI47_19575	0.77	+1.7
144,539	-		IAI47_19575	0.87	+1.1
144,552	+				+0.0
144,561	+				+1.0
144,605	+				+1.6
144,653	-				+0.6
144,688	+				+0.2
144,688	+				+0.4
144,689	-				+0.0
144,689	-				+0.6
144,708	+				-0.8
144,708	+				+0.8
144,709	-				-0.9
144,709	-				-0.1
144,709	-				-0.5
144,709	-				-1.6
144,709	-				-0.9
144,709	-				-0.8
144,714	+				+2.0
144,714	+				+1.2
144,714	+				-0.4
144,715	-				+0.0
144,715	-				+1.0
144,720	+				+0.2
144,720	+				+3.3
144,720	+				+2.7
144,720	+				+0.6
144,721	-				+1.4
144,721	-				+1.7
144,742	+				-1.4
144,742	+				+0.9
144,742	+				+1.5
144,743	-				+0.0
144,743	-				+0.0
144,784	+				-0.1
144,785	-				+1.6
144,785	-				+0.1
144,785	-				+0.9
144,785	-				-0.6
144,810	+				+1.7
144,810	+				+1.0
144,811	-				+1.0
144,852	+				-0.7
144,852	+				-0.3
144,853	-				-1.0
144,853	-				+0.7
144,853	-				+1.7
144,898	+		IAI47_19580	0.13	+1.1
144,898	+		IAI47_19580	0.13	+0.2
144,899	-		IAI47_19580	0.13	+0.0
144,925	+		IAI47_19580	0.15	+2.4
144,926	-		IAI47_19580	0.15	-1.0
144,964	-		IAI47_19580	0.18	+0.4
144,999	+		IAI47_19580	0.21	+0.7
144,999	+		IAI47_19580	0.21	+0.9
144,999	+		IAI47_19580	0.21	+0.7
145,000	-		IAI47_19580	0.21	-0.8
145,015	+		IAI47_19580	0.22	+2.0
145,015	+		IAI47_19580	0.22	+2.0
145,015	+		IAI47_19580	0.22	+1.3
145,015	+		IAI47_19580	0.22	-1.0
145,015	+		IAI47_19580	0.22	+1.8
145,015	+		IAI47_19580	0.22	+1.3
145,015	+		IAI47_19580	0.22	+2.0
145,015	+		IAI47_19580	0.22	+1.0
145,015	+		IAI47_19580	0.22	-0.7
145,015	+		IAI47_19580	0.22	+2.2
145,015	+		IAI47_19580	0.22	+0.1
145,016	-		IAI47_19580	0.22	+0.9
145,016	-		IAI47_19580	0.22	+0.3
145,016	-		IAI47_19580	0.22	+0.6
145,016	-		IAI47_19580	0.22	+0.4
145,016	-		IAI47_19580	0.22	+0.1
145,016	-		IAI47_19580	0.22	+2.0
145,016	-		IAI47_19580	0.22	+1.0
145,016	-		IAI47_19580	0.22	+0.3
145,016	-		IAI47_19580	0.22	+0.9
145,016	-		IAI47_19580	0.22	-1.2
145,016	-		IAI47_19580	0.22	+0.0
145,016	-		IAI47_19580	0.22	+2.1
145,016	-		IAI47_19580	0.22	-1.1
145,016	-		IAI47_19580	0.22	+0.9
145,016	-		IAI47_19580	0.22	+1.8
145,016	-		IAI47_19580	0.22	-0.8
145,016	-		IAI47_19580	0.22	+0.6
145,057	+		IAI47_19580	0.26	+1.0
145,057	+		IAI47_19580	0.26	+0.6
145,057	+		IAI47_19580	0.26	+1.2
145,057	+		IAI47_19580	0.26	+0.3
145,058	-		IAI47_19580	0.26	+0.4
145,067	-		IAI47_19580	0.26	+4.1
145,067	-		IAI47_19580	0.26	-1.0
145,067	-		IAI47_19580	0.26	+0.4
145,067	-		IAI47_19580	0.26	-0.2
145,091	+		IAI47_19580	0.28	+0.4
145,091	+		IAI47_19580	0.28	-1.1
145,091	+		IAI47_19580	0.28	-1.0
145,091	+		IAI47_19580	0.28	+1.3
145,092	-		IAI47_19580	0.28	+0.6
145,092	-		IAI47_19580	0.28	-0.3
145,121	-		IAI47_19580	0.31	-1.1
145,164	-		IAI47_19580	0.34	+1.0