Strain Fitness in Pantoea sp. MT58 around IAI47_17635

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
3,740,666	-		IAI47_17630	0.26	-2.1
3,740,706	+		IAI47_17630	0.30	-1.5
3,740,842	+		IAI47_17630	0.40	+0.7
3,740,842	+		IAI47_17630	0.40	+0.7
3,740,843	-		IAI47_17630	0.40	+0.4
3,740,930	-		IAI47_17630	0.47	-0.6
3,740,973	+		IAI47_17630	0.50	-0.8
3,740,973	+		IAI47_17630	0.50	+0.4
3,740,974	-		IAI47_17630	0.50	-1.3
3,740,974	-		IAI47_17630	0.50	+1.7
3,740,999	-		IAI47_17630	0.52	+0.4
3,741,001	+		IAI47_17630	0.52	+0.8
3,741,001	+		IAI47_17630	0.52	-2.0
3,741,001	+		IAI47_17630	0.52	+3.1
3,741,001	+		IAI47_17630	0.52	+0.4
3,741,001	+		IAI47_17630	0.52	-0.9
3,741,001	+		IAI47_17630	0.52	-0.6
3,741,001	+		IAI47_17630	0.52	+0.4
3,741,001	+		IAI47_17630	0.52	+0.3
3,741,001	+		IAI47_17630	0.52	+0.1
3,741,002	-		IAI47_17630	0.52	-1.2
3,741,002	-		IAI47_17630	0.52	+0.5
3,741,002	-		IAI47_17630	0.52	-0.5
3,741,002	-		IAI47_17630	0.52	-1.3
3,741,002	-		IAI47_17630	0.52	-0.7
3,741,114	+		IAI47_17630	0.61	+2.2
3,741,114	+		IAI47_17630	0.61	+2.0
3,741,115	-		IAI47_17630	0.61	-0.6
3,741,159	+		IAI47_17630	0.64	+2.1
3,741,160	-		IAI47_17630	0.64	-1.5
3,741,230	-		IAI47_17630	0.69	+0.4
3,741,230	-		IAI47_17630	0.69	+1.1
3,741,239	-		IAI47_17630	0.70	-0.0
3,741,239	-		IAI47_17630	0.70	-0.8
3,741,247	+		IAI47_17630	0.71	+0.7
3,741,247	+		IAI47_17630	0.71	+1.1
3,741,247	+		IAI47_17630	0.71	+1.3
3,741,247	+		IAI47_17630	0.71	+0.8
3,741,247	+		IAI47_17630	0.71	-1.2
3,741,247	+		IAI47_17630	0.71	-0.4
3,741,247	+		IAI47_17630	0.71	+3.3
3,741,247	+		IAI47_17630	0.71	+0.7
3,741,247	+		IAI47_17630	0.71	+0.8
3,741,247	+		IAI47_17630	0.71	+0.1
3,741,248	-		IAI47_17630	0.71	-0.7
3,741,248	-		IAI47_17630	0.71	+0.3
3,741,248	-		IAI47_17630	0.71	-1.2
3,741,248	-		IAI47_17630	0.71	-0.7
3,741,248	-		IAI47_17630	0.71	-1.1
3,741,251	+		IAI47_17630	0.71	-1.6
3,741,251	+		IAI47_17630	0.71	-1.5
3,741,251	+		IAI47_17630	0.71	+0.1
3,741,251	+		IAI47_17630	0.71	-1.5
3,741,251	+		IAI47_17630	0.71	-1.0
3,741,293	+		IAI47_17630	0.74	+0.6
3,741,293	+		IAI47_17630	0.74	+1.0
3,741,293	+		IAI47_17630	0.74	+1.0
3,741,293	+		IAI47_17630	0.74	+1.1
3,741,294	-		IAI47_17630	0.74	-2.0
3,741,294	-		IAI47_17630	0.74	-1.0
3,741,294	-		IAI47_17630	0.74	-0.8
3,741,294	-		IAI47_17630	0.74	+1.5
3,741,294	-		IAI47_17630	0.74	+3.1
3,741,294	-		IAI47_17630	0.74	-0.2
3,741,318	+		IAI47_17630	0.76	+0.5
3,741,368	-		IAI47_17630	0.80	+1.1
3,741,396	+		IAI47_17630	0.82	-1.9
3,741,396	+		IAI47_17630	0.82	-0.5
3,741,418	+		IAI47_17630	0.84	-0.1
3,741,419	-		IAI47_17630	0.84	-0.1
3,741,452	+		IAI47_17630	0.86	-0.6
3,741,452	+		IAI47_17630	0.86	-2.8
3,741,452	+		IAI47_17630	0.86	+0.0
3,741,452	+		IAI47_17630	0.86	-0.3
3,741,452	+		IAI47_17630	0.86	+1.6
3,741,452	+		IAI47_17630	0.86	+0.2
3,741,452	+		IAI47_17630	0.86	+0.0
3,741,452	+		IAI47_17630	0.86	+0.8
3,741,452	+		IAI47_17630	0.86	-0.1
3,741,452	+		IAI47_17630	0.86	+2.4
3,741,452	+		IAI47_17630	0.86	-0.6
3,741,452	+		IAI47_17630	0.86	-0.5
3,741,453	-		IAI47_17630	0.86	-1.3
3,741,453	-		IAI47_17630	0.86	-1.2
3,741,453	-		IAI47_17630	0.86	-2.1
3,741,453	-		IAI47_17630	0.86	-0.5
3,741,453	-		IAI47_17630	0.86	-0.6
3,741,453	-		IAI47_17630	0.86	-1.2
3,741,453	-		IAI47_17630	0.86	-0.9
3,741,453	-		IAI47_17630	0.86	-0.8
3,741,494	+		IAI47_17630	0.89	-1.1
3,741,494	+		IAI47_17630	0.89	-0.7
3,741,494	+		IAI47_17630	0.89	+1.1
3,741,494	+		IAI47_17630	0.89	+0.0
3,741,494	+		IAI47_17630	0.89	+3.0
3,741,495	-		IAI47_17630	0.90	-1.9
3,741,495	-		IAI47_17630	0.90	-2.4
3,741,495	-		IAI47_17630	0.90	-0.8
3,741,495	-		IAI47_17630	0.90	-1.5
3,741,495	-		IAI47_17630	0.90	-0.4
3,741,495	-		IAI47_17630	0.90	+0.7
3,741,495	-		IAI47_17630	0.90	-1.4
3,741,495	-		IAI47_17630	0.90	-2.9
3,741,495	-		IAI47_17630	0.90	-0.8
3,741,495	-		IAI47_17630	0.90	+0.0
3,741,495	-		IAI47_17630	0.90	-0.7
3,741,495	-		IAI47_17630	0.90	-2.7
3,741,642	+				-0.7
3,741,642	+				-1.6
3,741,643	-				-1.8
3,741,643	-				-0.6
3,741,643	-				-0.3
3,741,652	+				+1.6
3,741,652	+				-0.0
3,741,654	+				-0.4
3,741,655	-				-2.9
3,741,655	-				-1.2
3,741,655	-				-0.7
3,741,655	-				+0.3
3,741,655	-				-2.4
3,741,656	+				-1.3
3,741,697	-				-2.6
3,741,966	+		IAI47_17635	0.23	+0.5
3,741,966	+		IAI47_17635	0.23	-0.1
3,741,977	+		IAI47_17635	0.24	+2.3
3,741,977	+		IAI47_17635	0.24	-0.3
3,741,995	+		IAI47_17635	0.25	-0.4
3,742,042	+		IAI47_17635	0.29	-1.1
3,742,042	+		IAI47_17635	0.29	+2.1
3,742,043	-		IAI47_17635	0.29	-1.4
3,742,083	+		IAI47_17635	0.32	+0.6
3,742,084	-		IAI47_17635	0.32	-1.0
3,742,084	-		IAI47_17635	0.32	-0.6
3,742,084	-		IAI47_17635	0.32	-0.2
3,742,084	-		IAI47_17635	0.32	-1.4
3,742,180	-		IAI47_17635	0.38	-0.4
3,742,200	+		IAI47_17635	0.40	-0.5
3,742,200	+		IAI47_17635	0.40	-0.8
3,742,201	-		IAI47_17635	0.40	-0.1
3,742,201	-		IAI47_17635	0.40	-0.9
3,742,275	+		IAI47_17635	0.45	-2.3
3,742,276	-		IAI47_17635	0.45	-0.4
3,742,302	+		IAI47_17635	0.47	+0.2
3,742,302	+		IAI47_17635	0.47	+0.8
3,742,302	+		IAI47_17635	0.47	-0.2
3,742,303	-		IAI47_17635	0.47	-0.7
3,742,327	+		IAI47_17635	0.48	+0.4
3,742,328	-		IAI47_17635	0.49	-1.2
3,742,342	-		IAI47_17635	0.49	-0.7
3,742,342	-		IAI47_17635	0.49	+0.8
3,742,390	+		IAI47_17635	0.53	-1.2
3,742,390	+		IAI47_17635	0.53	+0.8
3,742,390	+		IAI47_17635	0.53	+0.1
3,742,390	+		IAI47_17635	0.53	-1.2
3,742,391	-		IAI47_17635	0.53	-0.6
3,742,432	+		IAI47_17635	0.56	+0.4
3,742,432	+		IAI47_17635	0.56	+0.1
3,742,433	-		IAI47_17635	0.56	-0.0
3,742,433	-		IAI47_17635	0.56	+0.9
3,742,446	+		IAI47_17635	0.57	+0.7
3,742,446	+		IAI47_17635	0.57	-2.2
3,742,446	+		IAI47_17635	0.57	-1.4
3,742,447	-		IAI47_17635	0.57	+1.0
3,742,447	-		IAI47_17635	0.57	+1.2
3,742,447	-		IAI47_17635	0.57	-1.7
3,742,447	-		IAI47_17635	0.57	-1.6
3,742,447	-		IAI47_17635	0.57	-0.1
3,742,447	-		IAI47_17635	0.57	+1.5
3,742,519	+		IAI47_17635	0.62	+0.1
3,742,519	+		IAI47_17635	0.62	-0.5
3,742,519	+		IAI47_17635	0.62	+2.1
3,742,520	-		IAI47_17635	0.62	-0.1
3,742,520	-		IAI47_17635	0.62	-1.6
3,742,520	-		IAI47_17635	0.62	-1.7
3,742,520	-		IAI47_17635	0.62	-0.3
3,742,559	-		IAI47_17635	0.65	+0.3
3,742,559	-		IAI47_17635	0.65	-0.8
3,742,559	-		IAI47_17635	0.65	+1.0
3,742,585	+		IAI47_17635	0.66	+2.1
3,742,585	+		IAI47_17635	0.66	-1.2
3,742,586	-		IAI47_17635	0.66	-1.2
3,742,719	+		IAI47_17635	0.76	-0.2
3,742,720	-		IAI47_17635	0.76	+3.6
3,742,720	-		IAI47_17635	0.76	+3.7
3,742,748	-		IAI47_17635	0.78	-0.5
3,742,748	-		IAI47_17635	0.78	+0.2
3,742,748	-		IAI47_17635	0.78	-0.9
3,742,755	+		IAI47_17635	0.78	+0.7
3,742,771	+		IAI47_17635	0.79	-1.6
3,742,771	+		IAI47_17635	0.79	-2.0
3,742,771	+		IAI47_17635	0.79	-0.9
3,742,771	+		IAI47_17635	0.79	-1.0
3,742,772	-		IAI47_17635	0.79	+0.6
3,742,772	-		IAI47_17635	0.79	-0.3
3,742,772	-		IAI47_17635	0.79	-0.0
3,742,772	-		IAI47_17635	0.79	-1.2
3,742,839	+		IAI47_17635	0.84	-1.2
3,742,840	-		IAI47_17635	0.84	-0.0
3,742,902	+		IAI47_17635	0.88	+0.1
3,742,902	+		IAI47_17635	0.88	-0.0
3,742,903	-		IAI47_17635	0.88	-1.6
3,742,903	-		IAI47_17635	0.88	+0.7
3,742,946	+				-0.2
3,742,946	+				-0.5
3,742,946	+				-1.0
3,742,946	+				-0.7
3,742,947	-				-1.4
3,742,947	-				+0.4
3,742,947	-				-0.4
3,743,020	+				-1.0
3,743,020	+				-0.2
3,743,020	+				-0.0
3,743,020	+				-1.0
3,743,020	+				-0.4
3,743,020	+				-1.6
3,743,020	+				-0.4
3,743,020	+				+1.3
3,743,020	+				-0.6
3,743,020	+				-1.3
3,743,021	-				-1.4
3,743,021	-				-0.2
3,743,021	-				+0.2
3,743,021	-				+0.0
3,743,021	-				-1.0
3,743,021	-				-0.6
3,743,021	-				-1.7
3,743,021	-				-0.8
3,743,021	-				-0.2
3,743,021	-				+0.4
3,743,021	-				-2.3
3,743,022	+				-2.3
3,743,022	+				-2.1
3,743,022	+				-0.7
3,743,022	+				-1.0
3,743,022	+				-0.4
3,743,022	+				-1.0
3,743,022	+				-2.7
3,743,022	+				+0.4
3,743,022	+				-0.9
3,743,022	+				-3.5
3,743,022	+				-1.5
3,743,023	-				-1.2
3,743,023	-				-0.2
3,743,023	-				+0.2
3,743,023	-				-1.3
3,743,023	-				-0.9
3,743,023	-				-0.5
3,743,023	-				-0.3
3,743,023	-				-2.0
3,743,023	-				-1.6
3,743,023	-				-1.7
3,743,023	-				-0.1
3,743,023	-				-0.7
3,743,023	-				-2.1
3,743,023	-				+0.5
3,743,023	-				-1.3
3,743,101	+				-1.2
3,743,101	+				-1.6
3,743,103	+				-1.2
3,743,103	+				-0.0
3,743,103	+				-0.5
3,743,104	-				-1.3
3,743,109	+				-0.3
3,743,110	-				-1.3
3,743,164	+				+0.6
3,743,164	+				-0.2
3,743,164	+				-1.3
3,743,164	+				-1.2
3,743,165	-				-1.3
3,743,165	-				-1.4
3,743,165	-				+0.1
3,743,166	+				-0.4
3,743,166	+				+0.3
3,743,166	+				+0.2
3,743,166	+				-0.8
3,743,166	+				+0.0
3,743,166	+				+1.5
3,743,166	+				+1.0
3,743,166	+				+0.5
3,743,166	+				-1.3
3,743,166	+				+0.2
3,743,166	+				+0.2
3,743,166	+				+1.6
3,743,166	+				+0.7
3,743,167	-				-1.1
3,743,167	-				+0.1
3,743,167	-				-0.9
3,743,167	-				+0.0
3,743,167	-				-0.7
3,743,167	-				-0.8
3,743,167	-				+0.4
3,743,167	-				-0.3
3,743,167	-				+1.6
3,743,227	-				-0.0
3,743,227	-				-2.9
3,743,227	-				-1.4
3,743,295	+				-1.3
3,743,296	-				-1.6
3,743,296	-				-1.0
3,743,296	-				+0.4
3,743,315	+				-1.2
3,743,315	+				-2.2
3,743,315	+				+0.5
3,743,316	-				-0.6
3,743,316	-				-0.3
3,743,316	-				+0.2
3,743,316	-				+0.4
3,743,326	+				+1.0
3,743,326	+				+1.2
3,743,327	-				-1.3
3,743,362	-				-0.8
3,743,362	-				+0.1
3,743,397	+		IAI47_17640	0.11	+0.2
3,743,463	+		IAI47_17640	0.15	+1.0
3,743,463	+		IAI47_17640	0.15	+2.0
3,743,463	+		IAI47_17640	0.15	-1.7
3,743,464	-		IAI47_17640	0.15	-2.3
3,743,464	-		IAI47_17640	0.15	-1.3
3,743,464	-		IAI47_17640	0.15	-2.8
3,743,552	+		IAI47_17640	0.21	-0.5
3,743,552	+		IAI47_17640	0.21	-1.4
3,743,553	-		IAI47_17640	0.21	+2.4
3,743,605	+		IAI47_17640	0.25	-1.2
3,743,605	+		IAI47_17640	0.25	-1.1
3,743,605	+		IAI47_17640	0.25	+0.2
3,743,605	+		IAI47_17640	0.25	+2.0
3,743,605	+		IAI47_17640	0.25	-0.5
3,743,605	+		IAI47_17640	0.25	-1.1
3,743,605	+		IAI47_17640	0.25	-0.7
3,743,605	+		IAI47_17640	0.25	+0.3
3,743,605	+		IAI47_17640	0.25	-2.2
3,743,605	+		IAI47_17640	0.25	+0.2
3,743,605	+		IAI47_17640	0.25	-0.7
3,743,605	+		IAI47_17640	0.25	-0.7
3,743,605	+		IAI47_17640	0.25	+0.4
3,743,606	-		IAI47_17640	0.25	-0.7
3,743,606	-		IAI47_17640	0.25	-2.6
3,743,606	-		IAI47_17640	0.25	-1.4
3,743,606	-		IAI47_17640	0.25	-1.6
3,743,606	-		IAI47_17640	0.25	-1.4
3,743,606	-		IAI47_17640	0.25	-2.0
3,743,606	-		IAI47_17640	0.25	-2.6
3,743,606	-		IAI47_17640	0.25	-1.8
3,743,606	-		IAI47_17640	0.25	+0.2
3,743,606	-		IAI47_17640	0.25	+0.1
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