Strain Fitness in Pantoea sp. MT58 around IAI47_09910

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,097,282	+		IAI47_09905	0.41	+0.3
2,097,282	+		IAI47_09905	0.41	-0.0
2,097,282	+		IAI47_09905	0.41	+0.5
2,097,282	+		IAI47_09905	0.41	+1.9
2,097,283	-		IAI47_09905	0.41	+0.3
2,097,283	-		IAI47_09905	0.41	+3.7
2,097,303	+		IAI47_09905	0.42	+3.8
2,097,304	-		IAI47_09905	0.43	-0.2
2,097,304	-		IAI47_09905	0.43	+1.4
2,097,328	-		IAI47_09905	0.44	-2.5
2,097,342	-		IAI47_09905	0.45	-0.5
2,097,352	+		IAI47_09905	0.46	+0.1
2,097,352	+		IAI47_09905	0.46	+0.6
2,097,352	+		IAI47_09905	0.46	+1.1
2,097,353	-		IAI47_09905	0.46	-0.7
2,097,353	-		IAI47_09905	0.46	+0.6
2,097,353	-		IAI47_09905	0.46	-0.6
2,097,353	-		IAI47_09905	0.46	-1.7
2,097,542	-		IAI47_09905	0.61	+1.4
2,097,542	-		IAI47_09905	0.61	+1.6
2,097,584	+		IAI47_09905	0.64	+0.4
2,097,584	+		IAI47_09905	0.64	+1.5
2,097,585	-		IAI47_09905	0.64	+0.9
2,097,585	-		IAI47_09905	0.64	+1.7
2,097,627	+		IAI47_09905	0.67	+0.1
2,097,627	+		IAI47_09905	0.67	-0.0
2,097,627	+		IAI47_09905	0.67	+0.6
2,097,628	-		IAI47_09905	0.67	+1.1
2,097,628	-		IAI47_09905	0.67	-0.7
2,097,641	+		IAI47_09905	0.68	+2.4
2,097,697	-		IAI47_09905	0.73	+0.6
2,097,733	+		IAI47_09905	0.75	-0.2
2,097,733	+		IAI47_09905	0.75	+0.7
2,097,733	+		IAI47_09905	0.75	+0.7
2,097,734	-		IAI47_09905	0.75	-0.7
2,097,734	-		IAI47_09905	0.75	-0.4
2,097,930	+				+1.9
2,097,930	+				+0.0
2,097,931	-				-1.9
2,097,931	-				+0.4
2,097,993	+				-1.6
2,098,026	+				+0.7
2,098,027	-				-1.4
2,098,027	-				+0.7
2,098,027	-				+2.6
2,098,027	-				-0.4
2,098,074	+				+1.2
2,098,074	+				+0.1
2,098,075	-				+1.2
2,098,075	-				+0.3
2,098,075	-				+0.0
2,098,075	-				+0.7
2,098,075	-				+1.1
2,098,075	-				-0.1
2,098,075	-				-0.7
2,098,121	+				-0.4
2,098,121	+				+0.9
2,098,121	+				-1.4
2,098,121	+				+1.1
2,098,121	+				+1.6
2,098,121	+				+1.5
2,098,121	+				+0.9
2,098,121	+				+0.6
2,098,121	+				-0.8
2,098,121	+				-0.4
2,098,121	+				-0.9
2,098,121	+				-0.5
2,098,122	-				+0.0
2,098,122	-				-0.3
2,098,122	-				+0.3
2,098,122	-				+0.3
2,098,127	+				+2.0
2,098,127	+				+1.3
2,098,127	+				-0.2
2,098,127	+				+0.2
2,098,127	+				+0.9
2,098,128	-				+1.0
2,098,128	-				+0.3
2,098,128	-				+1.7
2,098,128	-				-0.4
2,098,128	-				+1.1
2,098,140	+				+0.6
2,098,140	+				-0.8
2,098,151	+				+3.1
2,098,151	+				+0.4
2,098,151	+				+1.0
2,098,151	+				-1.0
2,098,152	-				-0.7
2,098,152	-				-1.0
2,098,152	-				-0.3
2,098,152	-				+0.4
2,098,157	+				+1.4
2,098,157	+				+1.1
2,098,157	+				+0.9
2,098,158	-				-0.7
2,098,159	-				+0.9
2,098,314	+		IAI47_09910	0.75	-0.4
2,098,362	+				+1.4
2,098,362	+				-0.4
2,098,362	+				+0.3
2,098,363	-				+1.1
2,098,363	-				+1.4
2,098,365	+				+0.6
2,098,366	-				+0.9
2,098,380	+				+0.7
2,098,380	+				+0.1
2,098,396	+				-0.1
2,098,397	-				+0.0
2,098,404	+				-1.1
2,098,404	+				+0.3
2,098,404	+				-0.7
2,098,404	+				+0.1
2,098,404	+				+0.9
2,098,404	+				-0.7
2,098,405	-				+0.4
2,098,405	-				-0.0
2,098,405	-				+1.7
2,098,405	-				-0.2
2,098,405	-				-0.2
2,098,408	+				+0.6
2,098,408	+				+0.7
2,098,408	+				+0.1
2,098,408	+				+3.7
2,098,409	-				-0.1
2,098,409	-				+0.2
2,098,409	-				+1.0
2,098,409	-				+0.7
2,098,409	-				+0.8
2,098,431	+				+2.0
2,098,432	-				-0.9
2,098,503	+				-1.4
2,098,534	+				+1.4
2,098,534	+				+1.7
2,098,535	-				-0.6
2,098,536	+				+0.0
2,098,536	+				+0.6
2,098,536	+				+1.4
2,098,536	+				+1.9
2,098,536	+				-0.5
2,098,536	+				+0.0
2,098,536	-				-0.3
2,098,537	-				+1.3
2,098,572	+				+0.7
2,098,572	+				+1.0
2,098,572	+				-0.1
2,098,572	+				+0.1
2,098,572	-				+1.0
2,098,573	-				-0.2
2,098,573	-				+1.1
2,098,596	-				+0.3
2,098,596	-				+0.9
2,098,596	-				-0.9
2,098,596	-				+0.7
2,098,609	+				+1.1
2,098,610	-				+0.0
2,098,610	-				+1.4
2,098,615	+				-0.9
2,098,616	-				+0.7
2,098,665	+				-0.4
2,098,773	+				+0.0
2,098,773	+				-0.7
2,098,777	-				+1.6
2,098,815	+		IAI47_09915	0.11	+0.4
2,098,815	+		IAI47_09915	0.11	+0.6
2,098,816	-		IAI47_09915	0.11	+0.3
2,098,816	-		IAI47_09915	0.11	+0.0
2,098,816	-		IAI47_09915	0.11	-0.2
2,098,816	-		IAI47_09915	0.11	+1.9
2,098,816	-		IAI47_09915	0.11	+0.0
2,098,819	+		IAI47_09915	0.11	+1.1
2,098,819	+		IAI47_09915	0.11	+0.0
2,098,820	-		IAI47_09915	0.11	-1.3
2,098,820	-		IAI47_09915	0.11	-1.2
2,098,820	-		IAI47_09915	0.11	-0.5
2,098,820	-		IAI47_09915	0.11	-0.7
2,098,820	-		IAI47_09915	0.11	+0.6
2,098,921	+		IAI47_09915	0.18	-0.7
2,098,921	+		IAI47_09915	0.18	-1.0
2,098,921	+		IAI47_09915	0.18	+1.9
2,098,921	+		IAI47_09915	0.18	+0.3
2,098,921	+		IAI47_09915	0.18	+0.6
2,098,921	+		IAI47_09915	0.18	-0.4
2,098,921	+		IAI47_09915	0.18	-0.4
2,098,921	+		IAI47_09915	0.18	+0.9
2,098,921	+		IAI47_09915	0.18	+0.4
2,098,922	-		IAI47_09915	0.19	-0.2
2,098,922	-		IAI47_09915	0.19	-0.1
2,098,922	-		IAI47_09915	0.19	-0.1
2,098,922	-		IAI47_09915	0.19	+1.2
2,098,922	-		IAI47_09915	0.19	+0.7
2,098,922	-		IAI47_09915	0.19	-0.7
2,098,922	-		IAI47_09915	0.19	-0.7
2,098,922	-		IAI47_09915	0.19	-0.4
2,098,922	-		IAI47_09915	0.19	-0.6
2,098,923	+		IAI47_09915	0.19	+2.6
2,098,923	+		IAI47_09915	0.19	+2.1
2,098,923	+		IAI47_09915	0.19	-0.1
2,098,924	-		IAI47_09915	0.19	+0.3
2,098,924	-		IAI47_09915	0.19	+0.3
2,098,924	-		IAI47_09915	0.19	-1.1
2,098,924	-		IAI47_09915	0.19	-0.9
2,098,924	-		IAI47_09915	0.19	-0.9
2,098,924	-		IAI47_09915	0.19	-0.4
2,098,924	-		IAI47_09915	0.19	+0.4
2,098,944	-		IAI47_09915	0.20	+1.7
2,098,944	-		IAI47_09915	0.20	-0.2
2,099,007	+		IAI47_09915	0.25	+0.6
2,099,008	-		IAI47_09915	0.25	+1.7
2,099,049	-		IAI47_09915	0.28	+0.6
2,099,049	-		IAI47_09915	0.28	+0.0
2,099,212	-		IAI47_09915	0.39	-0.1
2,099,212	-		IAI47_09915	0.39	+2.7
2,099,241	-		IAI47_09915	0.42	-1.3
2,099,241	-		IAI47_09915	0.42	-1.2
2,099,267	-		IAI47_09915	0.43	-0.4
2,099,321	+		IAI47_09915	0.47	-0.7
2,099,321	+		IAI47_09915	0.47	+0.4
2,099,321	+		IAI47_09915	0.47	-0.3
2,099,322	-		IAI47_09915	0.47	+0.7
2,099,322	-		IAI47_09915	0.47	+1.7
2,099,322	-		IAI47_09915	0.47	+2.1
2,099,348	+		IAI47_09915	0.49	+0.0