Strain Fitness in Pantoea sp. MT58 around IAI47_08110

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,710,615	-		IAI47_08095	0.62	-0.5
1,710,615	-		IAI47_08095	0.62	+0.7
1,710,615	-		IAI47_08095	0.62	-0.5
1,710,628	+		IAI47_08095	0.66	+0.7
1,710,628	+		IAI47_08095	0.66	-0.3
1,710,628	+		IAI47_08095	0.66	+0.7
1,710,628	+		IAI47_08095	0.66	-0.0
1,710,628	+		IAI47_08095	0.66	+0.5
1,710,628	+		IAI47_08095	0.66	+0.4
1,710,628	+		IAI47_08095	0.66	+1.3
1,710,628	+		IAI47_08095	0.66	-1.3
1,710,628	+		IAI47_08095	0.66	-0.9
1,710,628	+		IAI47_08095	0.66	+0.7
1,710,628	+		IAI47_08095	0.66	-0.1
1,710,628	+		IAI47_08095	0.66	-0.4
1,710,628	+		IAI47_08095	0.66	+0.1
1,710,629	-		IAI47_08095	0.66	-1.7
1,710,629	-		IAI47_08095	0.66	-1.7
1,710,629	-		IAI47_08095	0.66	-0.5
1,710,629	-		IAI47_08095	0.66	-1.0
1,710,629	-		IAI47_08095	0.66	+1.7
1,710,629	-		IAI47_08095	0.66	+2.3
1,710,635	+		IAI47_08095	0.68	-0.4
1,710,635	+		IAI47_08095	0.68	+1.0
1,710,635	+		IAI47_08095	0.68	+1.0
1,710,635	+		IAI47_08095	0.68	+0.7
1,710,635	+		IAI47_08095	0.68	+2.0
1,710,635	+		IAI47_08095	0.68	+0.8
1,710,635	+		IAI47_08095	0.68	-0.3
1,710,635	+		IAI47_08095	0.68	+0.3
1,710,635	+		IAI47_08095	0.68	-1.1
1,710,635	+		IAI47_08095	0.68	+0.2
1,710,636	-		IAI47_08095	0.68	+0.8
1,710,636	-		IAI47_08095	0.68	-1.3
1,710,636	-		IAI47_08095	0.68	-0.5
1,710,636	-		IAI47_08095	0.68	-1.1
1,710,636	-		IAI47_08095	0.68	-1.0
1,710,636	-		IAI47_08095	0.68	+0.2
1,710,636	-		IAI47_08095	0.68	+1.7
1,710,636	-		IAI47_08095	0.68	-1.0
1,710,649	+		IAI47_08095	0.72	+2.3
1,710,668	+		IAI47_08095	0.78	+0.6
1,710,669	-		IAI47_08095	0.78	+0.8
1,710,680	+		IAI47_08095	0.81	+0.3
1,710,680	+		IAI47_08095	0.81	-0.2
1,710,680	+		IAI47_08095	0.81	+0.4
1,710,680	+		IAI47_08095	0.81	+2.1
1,710,741	+				-0.5
1,710,741	+				-1.0
1,710,741	+				+1.0
1,710,742	-				-0.9
1,710,742	-				+0.9
1,710,742	-				-1.0
1,710,752	+				+0.2
1,710,752	+				+1.0
1,710,753	-				-0.5
1,710,753	-				-0.7
1,710,759	-				-0.2
1,710,772	+				+0.1
1,710,776	-				+1.4
1,710,858	+				+0.1
1,710,858	+				-0.4
1,710,859	-				+0.4
1,710,871	+				-0.7
1,710,872	-				+3.3
1,710,891	+				-1.9
1,710,891	+				-0.7
1,710,892	-				+2.1
1,710,931	+		IAI47_08100	0.13	-0.4
1,710,931	+		IAI47_08100	0.13	-0.5
1,710,931	+		IAI47_08100	0.13	-0.2
1,710,932	-		IAI47_08100	0.14	+2.7
1,710,932	-		IAI47_08100	0.14	-0.9
1,710,932	-		IAI47_08100	0.14	+1.8
1,710,956	+		IAI47_08100	0.23	-0.8
1,710,956	+		IAI47_08100	0.23	+0.5
1,710,984	+		IAI47_08100	0.33	-0.1
1,710,984	+		IAI47_08100	0.33	-0.3
1,710,984	+		IAI47_08100	0.33	-0.5
1,711,033	+		IAI47_08100	0.52	-0.6
1,711,033	+		IAI47_08100	0.52	+0.2
1,711,033	+		IAI47_08100	0.52	+1.3
1,711,034	-		IAI47_08100	0.52	-1.4
1,711,035	+		IAI47_08100	0.52	+0.1
1,711,036	-		IAI47_08100	0.53	+2.8
1,711,036	-		IAI47_08100	0.53	-0.2
1,711,036	-		IAI47_08100	0.53	-1.6
1,711,041	+		IAI47_08100	0.55	+0.7
1,711,041	+		IAI47_08100	0.55	+0.3
1,711,041	+		IAI47_08100	0.55	+0.4
1,711,041	+		IAI47_08100	0.55	+1.3
1,711,042	-		IAI47_08100	0.55	+0.3
1,711,042	-		IAI47_08100	0.55	+1.0
1,711,042	-		IAI47_08100	0.55	+2.3
1,711,042	-		IAI47_08100	0.55	+1.8
1,711,042	-		IAI47_08100	0.55	+0.5
1,711,042	-		IAI47_08100	0.55	+1.4
1,711,042	-		IAI47_08100	0.55	+0.8
1,711,074	+		IAI47_08100	0.67	-2.1
1,711,074	+		IAI47_08100	0.67	+0.6
1,711,074	+		IAI47_08100	0.67	+2.3
1,711,074	+		IAI47_08100	0.67	-1.2
1,711,074	+		IAI47_08100	0.67	+0.6
1,711,074	+		IAI47_08100	0.67	+0.3
1,711,075	-		IAI47_08100	0.67	-0.4
1,711,075	-		IAI47_08100	0.67	-0.6
1,711,075	-		IAI47_08100	0.67	-0.2
1,711,075	-		IAI47_08100	0.67	+0.7
1,711,077	+		IAI47_08100	0.68	+0.3
1,711,078	-		IAI47_08100	0.69	+1.6
1,711,078	-		IAI47_08100	0.69	+1.3
1,711,078	-		IAI47_08100	0.69	+2.0
1,711,078	-		IAI47_08100	0.69	-0.0
1,711,078	-		IAI47_08100	0.69	-1.4
1,711,087	-		IAI47_08100	0.72	+1.0
1,711,087	-		IAI47_08100	0.72	-0.9
1,711,137	+				+0.3
1,711,137	+				-0.2
1,711,138	-				+1.6
1,711,159	+				+1.1
1,711,159	+				+0.5
1,711,159	+				-2.3
1,711,159	+				-0.5
1,711,159	+				-0.6
1,711,159	+				+0.1
1,711,159	+				+1.0
1,711,159	+				+0.3
1,711,159	+				-0.6
1,711,159	+				-1.7
1,711,160	-				-1.0
1,711,160	-				+1.1
1,711,160	-				+0.6
1,711,160	-				-1.2
1,711,160	-				+0.8
1,711,160	-				-1.6
1,711,160	-				+0.3
1,711,160	-				+0.5
1,711,202	-				-0.4
1,711,202	-				+2.3
1,711,202	-				+3.6
1,711,289	+		IAI47_08105	0.37	-0.2
1,711,290	-		IAI47_08105	0.38	+1.0
1,711,322	+		IAI47_08105	0.51	+1.3
1,711,322	+		IAI47_08105	0.51	-1.5
1,711,323	-		IAI47_08105	0.51	+2.7
1,711,323	-		IAI47_08105	0.51	+4.7
1,711,395	+		IAI47_08105	0.81	-0.4
1,711,421	-				+0.8
1,711,475	+				+1.1
1,711,475	+				+0.9
1,711,475	+				+0.5
1,711,475	+				-0.0
1,711,476	-				-0.8
1,711,476	-				+1.5
1,711,476	-				-0.0
1,711,478	+				-0.5
1,711,479	-				+2.0
1,711,479	-				-0.0
1,711,484	-				+0.5
1,711,487	+				+2.3
1,711,497	-				+0.3
1,711,584	+				+0.4
1,711,584	+				+0.4
1,711,584	+				+0.8
1,711,584	+				-0.9
1,711,584	+				-0.7
1,711,585	-				+1.2
1,711,585	-				+1.0
1,711,585	-				+0.2
1,711,595	+				+2.0
1,711,595	+				+0.6
1,711,596	-				+0.6
1,711,596	-				-1.2
1,711,596	-				+1.5
1,711,628	+				+0.1
1,711,629	-				-1.2
1,711,629	-				-0.5
1,711,629	-				-0.7
1,711,631	+				+0.7
1,711,631	+				+0.5
1,711,631	+				+1.4
1,711,631	+				-0.3
1,711,632	-				-0.6
1,711,632	-				+1.0
1,711,632	-				+0.5
1,711,632	-				-1.5
1,711,632	-				+0.5
1,711,632	-				+0.1
1,711,632	-				-1.1
1,711,632	-				-0.4
1,711,635	+				+0.5
1,711,635	+				+2.4
1,711,635	+				+0.3
1,711,635	+				+0.8
1,711,635	+				+1.2
1,711,635	+				+0.9
1,711,635	+				+0.4
1,711,635	+				+0.5
1,711,635	+				+0.7
1,711,635	+				-0.0
1,711,636	-				-0.3
1,711,636	-				+2.3
1,711,636	-				+0.9
1,711,636	-				+0.2
1,711,636	-				+0.1
1,711,636	-				+3.0
1,711,848	+		IAI47_08110	0.78	-0.4
1,711,848	+		IAI47_08110	0.78	+2.5
1,711,848	+		IAI47_08110	0.78	+1.2
1,711,848	+		IAI47_08110	0.78	-1.0
1,711,849	-		IAI47_08110	0.78	-1.0
1,711,849	-		IAI47_08110	0.78	-0.5
1,711,873	+		IAI47_08110	0.86	+1.2
1,711,873	+		IAI47_08110	0.86	+0.8
1,711,873	+		IAI47_08110	0.86	+4.3
1,711,873	+		IAI47_08110	0.86	+0.9
1,711,873	+		IAI47_08110	0.86	+1.0
1,711,874	-		IAI47_08110	0.86	-0.0
1,711,874	-		IAI47_08110	0.86	-0.9
1,711,890	+				-1.0
1,711,890	+				-0.7
1,711,912	+				+1.7
1,711,912	+				-0.3
1,711,912	+				-0.1
1,711,912	+				+0.1
1,711,913	-				-1.7
1,711,913	-				+1.0
1,712,026	+				+0.4
1,712,027	-				+1.0
1,712,035	-				-0.3
1,712,044	+				-0.6
1,712,044	+				+1.1
1,712,044	+				+0.5
1,712,044	+				-0.4
1,712,044	+				+1.1
1,712,044	+				-0.6
1,712,045	-				+0.2
1,712,045	-				+0.5
1,712,045	-				+1.3
1,712,045	-				+0.9
1,712,045	-				+0.2
1,712,049	+				+0.9
1,712,049	+				+1.7
1,712,049	+				+0.3
1,712,049	+				+0.1
1,712,049	+				-0.3
1,712,050	-				+0.5
1,712,050	-				-1.7
1,712,058	-				-0.7
1,712,062	+				-0.9
1,712,062	+				-1.7
1,712,062	+				-0.5
1,712,062	+				-0.3
1,712,062	+				-1.6
1,712,063	-				+0.7
1,712,111	+				-0.1
1,712,111	+				+0.3
1,712,111	+				+0.1
1,712,124	+				+0.8
1,712,148	+		IAI47_08115	0.12	-1.0
1,712,148	+		IAI47_08115	0.12	-1.0
1,712,149	-		IAI47_08115	0.12	+1.3
1,712,149	-		IAI47_08115	0.12	+1.6
1,712,149	-		IAI47_08115	0.12	+0.3
1,712,177	+		IAI47_08115	0.21	+0.5
1,712,178	-		IAI47_08115	0.21	+1.6
1,712,178	-		IAI47_08115	0.21	-0.1
1,712,178	-		IAI47_08115	0.21	-0.7
1,712,178	-		IAI47_08115	0.21	-1.2
1,712,209	-		IAI47_08115	0.31	-0.6
1,712,209	-		IAI47_08115	0.31	+0.5
1,712,209	-		IAI47_08115	0.31	+2.0
1,712,209	-		IAI47_08115	0.31	+2.3
1,712,276	+		IAI47_08115	0.51	+1.5
1,712,276	+		IAI47_08115	0.51	+0.7
1,712,276	+		IAI47_08115	0.51	-0.9
1,712,276	+		IAI47_08115	0.51	+1.2
1,712,276	+		IAI47_08115	0.51	-0.3
1,712,276	+		IAI47_08115	0.51	+0.6
1,712,277	-		IAI47_08115	0.52	+0.8
1,712,277	-		IAI47_08115	0.52	-1.2
1,712,277	-		IAI47_08115	0.52	+0.3
1,712,277	-		IAI47_08115	0.52	+1.4
1,712,277	-		IAI47_08115	0.52	+0.8
1,712,277	-		IAI47_08115	0.52	+0.4
1,712,277	-		IAI47_08115	0.52	-1.0
1,712,277	-		IAI47_08115	0.52	+3.3
1,712,280	+		IAI47_08115	0.52	+0.9
1,712,280	+		IAI47_08115	0.52	+0.5
1,712,280	+		IAI47_08115	0.52	-0.2
1,712,280	+		IAI47_08115	0.52	+0.0
1,712,280	+		IAI47_08115	0.52	-0.4
1,712,280	+		IAI47_08115	0.52	-0.6
1,712,280	+		IAI47_08115	0.52	+0.1
1,712,280	+		IAI47_08115	0.52	+0.8
1,712,281	-		IAI47_08115	0.53	-0.7
1,712,281	-		IAI47_08115	0.53	-1.0
1,712,281	-		IAI47_08115	0.53	+1.4
1,712,281	-		IAI47_08115	0.53	+1.7
1,712,281	-		IAI47_08115	0.53	-0.2
1,712,281	-		IAI47_08115	0.53	-1.0
1,712,347	+		IAI47_08115	0.73	+0.7
1,712,348	-		IAI47_08115	0.73	-0.4
1,712,411	+				+1.5
1,712,411	+				+0.6
1,712,411	+				-0.7
1,712,411	+				-0.5
1,712,411	+				+0.8
1,712,411	+				-0.3
1,712,411	+				-0.0
1,712,412	-				-0.0
1,712,412	-				+0.1
1,712,412	-				+1.3
1,712,414	+				-0.2
1,712,414	+				-0.6
1,712,414	+				-0.1
1,712,414	+				-0.3
1,712,414	+				+1.0
1,712,414	+				-1.2
1,712,414	+				+1.7
1,712,415	-				-0.7
1,712,415	-				-0.7
1,712,415	-				+0.7
1,712,415	-				+0.2
1,712,415	-				-0.4
1,712,415	-				+0.2
1,712,415	-				-1.0
1,712,434	-				+0.4
1,712,434	-				-0.7
1,712,439	+				-0.7
1,712,439	+				-0.0
1,712,439	+				+0.5
1,712,440	-				+0.7
1,712,440	-				-1.3
1,712,471	+				-0.5
1,712,471	+				+2.1
1,712,508	+				-0.5
1,712,509	-				+0.3
1,712,610	+				-1.9
1,712,610	+				-0.9
1,712,610	+				+1.3
1,712,610	+				+0.5
1,712,611	-				+0.7
1,712,622	-				+1.7
1,712,649	+				+2.3
1,712,675	+				+1.1
1,712,675	+				-0.6