Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4678

Experiment: Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%
6,132,247	+				+0.1
6,132,248	-				+0.9
6,132,296	-		BT4676	0.21	+0.9
6,132,365	+		BT4676	0.36	+0.9
6,132,435	-		BT4676	0.52	+0.9
6,132,455	-		BT4676	0.57	-1.0
6,132,461	+		BT4676	0.58	+0.9
6,132,462	-		BT4676	0.58	+0.9
6,132,528	-		BT4676	0.73	+0.5
6,132,573	+		BT4676	0.83	-0.1
6,132,574	-		BT4676	0.83	-1.0
6,132,668	-				-0.2
6,132,688	+				-1.9
6,132,689	-				-2.1
6,132,784	-		BT4677	0.18	-0.9
6,132,823	+		BT4677	0.26	-0.1
6,132,824	-		BT4677	0.26	-0.6
6,132,824	-		BT4677	0.26	-1.3
6,132,871	-		BT4677	0.36	+0.4
6,132,976	+		BT4677	0.56	-2.1
6,132,977	-		BT4677	0.57	+2.5
6,132,977	-		BT4677	0.57	-1.9
6,133,051	-		BT4677	0.71	+0.9
6,133,064	+		BT4677	0.74	-1.3
6,133,065	-				-1.9
6,133,192	-				-0.4
6,133,192	-				-1.2
6,133,197	+				-0.1
6,133,198	-				-0.9
6,133,205	+				-1.5
6,133,205	+				-0.6
6,133,235	+				-0.4
6,133,242	+				+0.1
6,133,245	-				-0.4
6,133,245	-				+0.9
6,133,247	+				+1.5
6,133,248	-				-0.3
6,133,295	+				-0.3
6,133,295	+				-0.7
6,133,720	+		BT4678	0.38	-0.2
6,133,721	-		BT4678	0.38	-0.4
6,133,721	-		BT4678	0.38	+0.9
6,133,752	+		BT4678	0.41	-0.5
6,133,808	+		BT4678	0.45	-0.6
6,133,861	+		BT4678	0.50	+0.1
6,133,862	-		BT4678	0.50	+0.9
6,133,866	-		BT4678	0.50	+0.0
6,133,868	+		BT4678	0.50	-0.2
6,133,869	-		BT4678	0.50	+1.1
6,133,869	-		BT4678	0.50	-0.6
6,133,884	+		BT4678	0.52	-1.1
6,133,889	-		BT4678	0.52	+0.6
6,133,982	-		BT4678	0.60	-0.1
6,133,983	+		BT4678	0.60	-0.7
6,133,984	-		BT4678	0.60	+0.9
6,134,110	-		BT4678	0.70	-0.5
6,134,141	+		BT4678	0.72	-0.1
6,134,269	-		BT4678	0.83	+0.3
6,134,272	+		BT4678	0.83	+0.9
6,134,273	-		BT4678	0.83	+1.9
6,134,307	+		BT4678	0.86	+0.9
6,134,435	-				-1.0
6,134,469	+				-1.6
6,134,476	+				+0.9
6,134,510	+				-0.1
6,134,510	+				+0.2
6,134,510	+				-0.2
6,134,511	-				-0.1
6,134,511	-				+0.5
6,134,531	+				-0.8
6,134,584	+		BT4679	0.11	-0.2
6,134,660	+		BT4679	0.18	-0.5
6,134,777	-		BT4679	0.29	-1.8
6,134,795	+		BT4679	0.31	-0.2
6,134,833	+		BT4679	0.34	-0.3
6,134,873	+		BT4679	0.38	-1.9
6,134,874	-		BT4679	0.38	-0.6
6,134,874	-		BT4679	0.38	-0.4
6,134,875	+		BT4679	0.38	-1.9
6,134,876	-		BT4679	0.38	-0.5
6,135,028	+		BT4679	0.53	-0.1
6,135,028	+		BT4679	0.53	+1.9
6,135,057	+		BT4679	0.56	-0.9
6,135,059	+		BT4679	0.56	-0.5
6,135,119	+		BT4679	0.61	-0.9
6,135,123	+		BT4679	0.62	+0.9
6,135,124	-		BT4679	0.62	-1.1
6,135,127	+		BT4679	0.62	-1.4
6,135,132	-		BT4679	0.63	-0.9
6,135,132	-		BT4679	0.63	-0.8
6,135,132	-		BT4679	0.63	+2.3
6,135,230	+		BT4679	0.72	-0.7
6,135,232	+		BT4679	0.72	-0.6
6,135,232	+		BT4679	0.72	-0.5
6,135,233	-		BT4679	0.72	-0.4
6,135,233	-		BT4679	0.72	-1.1
6,135,249	+		BT4679	0.74	+0.6
6,135,273	+		BT4679	0.76	-2.0
6,135,274	-		BT4679	0.76	+0.4
6,135,274	-		BT4679	0.76	-1.4
6,135,276	+		BT4679	0.76	-0.1
6,135,276	+		BT4679	0.76	+0.1