Experiment: sodium fluoride 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3790 and Pf6N2E2_3791 are separated by 201 nucleotides
Pf6N2E2_3790 - hypothetical protein, at 4,414,474 to 4,414,815
_3790
Pf6N2E2_3791 - Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-), at 4,415,017 to 4,417,530
_3791
Position (kb)
4414
4415 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4413.519 kb on - strand at 4413.519 kb on - strand at 4413.569 kb on + strand at 4413.670 kb on + strand at 4413.670 kb on + strand at 4413.671 kb on - strand at 4413.713 kb on - strand at 4413.721 kb on + strand at 4413.721 kb on + strand at 4413.775 kb on - strand at 4413.791 kb on + strand at 4413.792 kb on - strand at 4414.082 kb on + strand at 4414.082 kb on + strand at 4414.083 kb on - strand at 4414.083 kb on - strand at 4414.110 kb on - strand at 4414.123 kb on + strand at 4414.138 kb on + strand at 4414.138 kb on + strand at 4414.139 kb on - strand at 4414.151 kb on + strand at 4414.151 kb on + strand at 4414.151 kb on + strand at 4414.151 kb on + strand at 4414.151 kb on + strand at 4414.151 kb on + strand at 4414.151 kb on + strand at 4414.151 kb on + strand at 4414.152 kb on - strand at 4414.152 kb on - strand at 4414.152 kb on - strand at 4414.152 kb on - strand at 4414.152 kb on - strand at 4414.152 kb on - strand at 4414.152 kb on - strand at 4414.152 kb on - strand at 4414.155 kb on + strand at 4414.155 kb on + strand at 4414.155 kb on + strand at 4414.156 kb on - strand at 4414.156 kb on - strand at 4414.156 kb on - strand at 4414.156 kb on - strand at 4414.156 kb on - strand at 4414.217 kb on + strand at 4414.217 kb on + strand at 4414.217 kb on + strand at 4414.217 kb on + strand at 4414.217 kb on + strand at 4414.217 kb on + strand at 4414.218 kb on - strand at 4414.218 kb on - strand at 4414.218 kb on - strand at 4414.223 kb on + strand at 4414.223 kb on + strand at 4414.224 kb on - strand at 4414.266 kb on - strand at 4414.319 kb on + strand at 4414.320 kb on - strand at 4414.431 kb on - strand at 4414.431 kb on - strand at 4414.555 kb on + strand, within Pf6N2E2_3790 at 4414.556 kb on - strand, within Pf6N2E2_3790 at 4414.556 kb on - strand, within Pf6N2E2_3790 at 4414.558 kb on + strand, within Pf6N2E2_3790 at 4414.558 kb on + strand, within Pf6N2E2_3790 at 4414.743 kb on + strand, within Pf6N2E2_3790 at 4414.743 kb on + strand, within Pf6N2E2_3790 at 4414.744 kb on - strand, within Pf6N2E2_3790 at 4414.744 kb on - strand, within Pf6N2E2_3790 at 4414.744 kb on - strand, within Pf6N2E2_3790 at 4414.805 kb on + strand at 4414.805 kb on + strand at 4414.805 kb on + strand at 4414.805 kb on + strand at 4414.805 kb on + strand at 4414.805 kb on + strand at 4414.805 kb on + strand at 4414.805 kb on + strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.806 kb on - strand at 4414.929 kb on + strand at 4415.295 kb on - strand, within Pf6N2E2_3791 at 4415.375 kb on + strand, within Pf6N2E2_3791 at 4415.375 kb on + strand, within Pf6N2E2_3791 at 4415.375 kb on + strand, within Pf6N2E2_3791 at 4415.375 kb on + strand, within Pf6N2E2_3791 at 4415.375 kb on + strand, within Pf6N2E2_3791 at 4415.376 kb on - strand, within Pf6N2E2_3791 at 4415.376 kb on - strand, within Pf6N2E2_3791 at 4415.412 kb on - strand, within Pf6N2E2_3791 at 4415.412 kb on - strand, within Pf6N2E2_3791
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 15 mM remove 4,413,519 - +0.1 4,413,519 - -1.8 4,413,569 + +0.3 4,413,670 + +0.7 4,413,670 + +0.5 4,413,671 - -0.8 4,413,713 - +0.2 4,413,721 + -0.2 4,413,721 + -0.7 4,413,775 - -0.0 4,413,791 + +0.2 4,413,792 - +1.0 4,414,082 + +0.9 4,414,082 + -0.5 4,414,083 - +0.5 4,414,083 - +0.8 4,414,110 - -0.1 4,414,123 + +0.4 4,414,138 + +0.8 4,414,138 + +0.2 4,414,139 - +0.6 4,414,151 + +0.1 4,414,151 + +0.3 4,414,151 + -0.2 4,414,151 + -0.2 4,414,151 + -0.1 4,414,151 + +1.1 4,414,151 + -0.4 4,414,151 + +0.5 4,414,152 - +0.3 4,414,152 - +0.6 4,414,152 - +0.3 4,414,152 - -0.3 4,414,152 - +0.1 4,414,152 - -0.7 4,414,152 - +0.9 4,414,152 - +0.2 4,414,155 + -0.2 4,414,155 + -0.7 4,414,155 + -0.4 4,414,156 - +1.4 4,414,156 - -0.0 4,414,156 - -0.3 4,414,156 - -1.0 4,414,156 - +0.8 4,414,217 + -0.8 4,414,217 + +0.7 4,414,217 + +0.6 4,414,217 + +0.3 4,414,217 + +0.5 4,414,217 + -0.2 4,414,218 - -0.5 4,414,218 - -0.2 4,414,218 - +1.0 4,414,223 + +0.3 4,414,223 + -1.2 4,414,224 - -0.0 4,414,266 - +1.2 4,414,319 + -1.7 4,414,320 - +1.1 4,414,431 - +0.5 4,414,431 - +1.0 4,414,555 + Pf6N2E2_3790 0.24 -1.8 4,414,556 - Pf6N2E2_3790 0.24 -0.2 4,414,556 - Pf6N2E2_3790 0.24 -1.2 4,414,558 + Pf6N2E2_3790 0.25 +0.3 4,414,558 + Pf6N2E2_3790 0.25 -1.0 4,414,743 + Pf6N2E2_3790 0.79 -0.2 4,414,743 + Pf6N2E2_3790 0.79 -0.5 4,414,744 - Pf6N2E2_3790 0.79 -0.7 4,414,744 - Pf6N2E2_3790 0.79 -2.4 4,414,744 - Pf6N2E2_3790 0.79 -0.2 4,414,805 + -0.4 4,414,805 + +0.3 4,414,805 + +0.2 4,414,805 + -0.0 4,414,805 + -0.6 4,414,805 + -0.8 4,414,805 + +1.5 4,414,805 + -1.1 4,414,806 - +0.3 4,414,806 - +0.6 4,414,806 - +0.1 4,414,806 - +0.2 4,414,806 - -0.5 4,414,806 - -0.3 4,414,806 - -1.2 4,414,806 - +1.2 4,414,806 - -0.7 4,414,806 - -0.6 4,414,806 - -0.0 4,414,806 - -0.0 4,414,806 - -1.0 4,414,806 - +1.0 4,414,929 + +0.3 4,415,295 - Pf6N2E2_3791 0.11 +2.2 4,415,375 + Pf6N2E2_3791 0.14 +2.0 4,415,375 + Pf6N2E2_3791 0.14 +1.7 4,415,375 + Pf6N2E2_3791 0.14 +0.5 4,415,375 + Pf6N2E2_3791 0.14 +2.4 4,415,375 + Pf6N2E2_3791 0.14 +2.0 4,415,376 - Pf6N2E2_3791 0.14 +1.9 4,415,376 - Pf6N2E2_3791 0.14 +2.6 4,415,412 - Pf6N2E2_3791 0.16 +1.5 4,415,412 - Pf6N2E2_3791 0.16 +1.9
Or see this region's nucleotide sequence