Experiment: sodium fluoride 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1752 and Pf6N2E2_1753 are separated by 283 nucleotides
Pf6N2E2_1752 - Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8), at 2,067,349 to 2,069,529
_1752
Pf6N2E2_1753 - FIG00643128: hypothetical protein, at 2,069,813 to 2,071,282
_1753
Position (kb)
2069
2070
2071
2072 Strain fitness (log2 ratio)
-2
-1
0
1 at 2068.813 kb on - strand, within Pf6N2E2_1752 at 2068.815 kb on - strand, within Pf6N2E2_1752 at 2068.815 kb on - strand, within Pf6N2E2_1752 at 2068.863 kb on - strand, within Pf6N2E2_1752 at 2068.943 kb on + strand, within Pf6N2E2_1752 at 2068.943 kb on + strand, within Pf6N2E2_1752 at 2068.944 kb on - strand, within Pf6N2E2_1752 at 2069.039 kb on + strand, within Pf6N2E2_1752 at 2069.143 kb on - strand, within Pf6N2E2_1752 at 2069.192 kb on + strand, within Pf6N2E2_1752 at 2069.193 kb on - strand, within Pf6N2E2_1752 at 2069.253 kb on - strand, within Pf6N2E2_1752 at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.328 kb on - strand at 2069.328 kb on - strand at 2069.487 kb on + strand at 2069.547 kb on + strand at 2069.614 kb on - strand at 2069.614 kb on - strand at 2069.690 kb on - strand at 2069.703 kb on - strand at 2069.826 kb on + strand at 2069.853 kb on + strand at 2069.854 kb on - strand at 2070.060 kb on - strand, within Pf6N2E2_1753 at 2070.334 kb on - strand, within Pf6N2E2_1753 at 2070.487 kb on - strand, within Pf6N2E2_1753 at 2070.693 kb on - strand, within Pf6N2E2_1753 at 2070.925 kb on + strand, within Pf6N2E2_1753 at 2071.102 kb on - strand, within Pf6N2E2_1753 at 2071.104 kb on + strand, within Pf6N2E2_1753 at 2071.160 kb on - strand at 2071.189 kb on - strand at 2071.235 kb on - strand at 2071.294 kb on - strand at 2071.649 kb on - strand at 2071.703 kb on - strand at 2071.940 kb on - strand at 2071.989 kb on - strand at 2072.182 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 15 mM remove 2,068,813 - Pf6N2E2_1752 0.67 +0.4 2,068,815 - Pf6N2E2_1752 0.67 -0.9 2,068,815 - Pf6N2E2_1752 0.67 +0.2 2,068,863 - Pf6N2E2_1752 0.69 -1.0 2,068,943 + Pf6N2E2_1752 0.73 +0.4 2,068,943 + Pf6N2E2_1752 0.73 +0.6 2,068,944 - Pf6N2E2_1752 0.73 +0.2 2,069,039 + Pf6N2E2_1752 0.77 +0.8 2,069,143 - Pf6N2E2_1752 0.82 +0.4 2,069,192 + Pf6N2E2_1752 0.85 -2.4 2,069,193 - Pf6N2E2_1752 0.85 +0.3 2,069,253 - Pf6N2E2_1752 0.87 +0.5 2,069,327 + +1.6 2,069,327 + -0.8 2,069,327 + +0.6 2,069,327 + -0.1 2,069,327 + -1.1 2,069,327 + +1.0 2,069,327 + +1.6 2,069,328 - +0.9 2,069,328 - -1.3 2,069,487 + +1.2 2,069,547 + -0.5 2,069,614 - +0.3 2,069,614 - +0.9 2,069,690 - +0.2 2,069,703 - +0.3 2,069,826 + +0.2 2,069,853 + +0.2 2,069,854 - +0.5 2,070,060 - Pf6N2E2_1753 0.17 +0.0 2,070,334 - Pf6N2E2_1753 0.35 -0.5 2,070,487 - Pf6N2E2_1753 0.46 -0.2 2,070,693 - Pf6N2E2_1753 0.60 -0.8 2,070,925 + Pf6N2E2_1753 0.76 -1.4 2,071,102 - Pf6N2E2_1753 0.88 +0.0 2,071,104 + Pf6N2E2_1753 0.88 -1.7 2,071,160 - +0.4 2,071,189 - -0.0 2,071,235 - -0.1 2,071,294 - -0.1 2,071,649 - -0.7 2,071,703 - +0.1 2,071,940 - +0.6 2,071,989 - -0.2 2,072,182 + -0.1
Or see this region's nucleotide sequence