Experiment: sodium fluoride 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_137 and Pf6N2E2_138 are separated by 30 nucleotides Pf6N2E2_138 and Pf6N2E2_139 are separated by 435 nucleotides
Pf6N2E2_137 - Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD, at 186,099 to 187,634
_137
Pf6N2E2_138 - Alpha/beta hydrolase fold (EC 3.8.1.5), at 187,665 to 188,594
_138
Pf6N2E2_139 - Two-component response regulator, at 189,030 to 189,977
_139
Position (kb) 187
188
189 Strain fitness (log2 ratio) -2
-1
0
1
2 at 187.085 kb on - strand, within Pf6N2E2_137 at 187.168 kb on + strand, within Pf6N2E2_137 at 187.168 kb on + strand, within Pf6N2E2_137 at 187.168 kb on + strand, within Pf6N2E2_137 at 187.171 kb on + strand, within Pf6N2E2_137 at 187.171 kb on + strand, within Pf6N2E2_137 at 187.172 kb on - strand, within Pf6N2E2_137 at 187.293 kb on + strand, within Pf6N2E2_137 at 187.293 kb on + strand, within Pf6N2E2_137 at 187.294 kb on - strand, within Pf6N2E2_137 at 187.359 kb on + strand, within Pf6N2E2_137 at 187.360 kb on - strand, within Pf6N2E2_137 at 187.468 kb on + strand, within Pf6N2E2_137 at 187.585 kb on + strand at 187.585 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.634 kb on + strand at 187.635 kb on - strand at 187.635 kb on - strand at 187.635 kb on - strand at 187.635 kb on - strand at 187.635 kb on - strand at 187.635 kb on - strand at 187.635 kb on - strand at 187.840 kb on - strand, within Pf6N2E2_138 at 187.840 kb on - strand, within Pf6N2E2_138 at 187.840 kb on - strand, within Pf6N2E2_138 at 188.005 kb on + strand, within Pf6N2E2_138 at 188.006 kb on - strand, within Pf6N2E2_138 at 188.171 kb on - strand, within Pf6N2E2_138 at 188.263 kb on + strand, within Pf6N2E2_138 at 188.326 kb on + strand, within Pf6N2E2_138 at 188.381 kb on - strand, within Pf6N2E2_138 at 188.515 kb on + strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.655 kb on + strand at 188.656 kb on - strand at 188.656 kb on - strand at 188.656 kb on - strand at 188.656 kb on - strand at 188.662 kb on + strand at 188.662 kb on + strand at 188.699 kb on - strand at 188.699 kb on - strand at 188.715 kb on + strand at 188.715 kb on + strand at 188.715 kb on + strand at 188.715 kb on + strand at 188.716 kb on - strand at 188.716 kb on - strand at 188.716 kb on - strand at 188.723 kb on - strand at 188.723 kb on - strand at 188.723 kb on - strand at 188.747 kb on + strand at 188.747 kb on + strand at 188.747 kb on + strand at 188.748 kb on - strand at 188.748 kb on - strand at 188.748 kb on - strand at 188.748 kb on - strand at 188.748 kb on - strand at 188.748 kb on - strand at 188.748 kb on - strand at 188.748 kb on - strand at 188.789 kb on + strand at 188.789 kb on + strand at 188.789 kb on + strand at 188.790 kb on - strand at 188.833 kb on + strand at 188.833 kb on + strand at 188.937 kb on + strand at 188.937 kb on + strand at 188.937 kb on + strand at 188.937 kb on + strand at 188.937 kb on + strand at 188.938 kb on - strand at 188.938 kb on - strand at 188.938 kb on - strand at 188.938 kb on - strand at 188.938 kb on - strand at 188.938 kb on - strand at 188.939 kb on + strand at 188.939 kb on + strand at 188.939 kb on + strand at 188.939 kb on + strand at 188.939 kb on + strand at 188.939 kb on + strand at 188.939 kb on + strand at 188.939 kb on + strand at 188.939 kb on + strand at 188.940 kb on - strand at 188.940 kb on - strand at 188.940 kb on - strand at 188.940 kb on - strand at 188.940 kb on - strand at 188.940 kb on - strand at 188.940 kb on - strand at 188.941 kb on + strand at 188.942 kb on - strand at 189.066 kb on + strand at 189.118 kb on + strand at 189.119 kb on - strand at 189.336 kb on + strand, within Pf6N2E2_139 at 189.336 kb on + strand, within Pf6N2E2_139 at 189.336 kb on + strand, within Pf6N2E2_139 at 189.336 kb on + strand, within Pf6N2E2_139 at 189.336 kb on + strand, within Pf6N2E2_139 at 189.336 kb on + strand, within Pf6N2E2_139 at 189.336 kb on + strand, within Pf6N2E2_139 at 189.336 kb on + strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.337 kb on - strand, within Pf6N2E2_139 at 189.402 kb on + strand, within Pf6N2E2_139 at 189.402 kb on + strand, within Pf6N2E2_139 at 189.402 kb on + strand, within Pf6N2E2_139 at 189.403 kb on - strand, within Pf6N2E2_139 at 189.403 kb on - strand, within Pf6N2E2_139 at 189.403 kb on - strand, within Pf6N2E2_139
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 15 mM remove 187,085 - Pf6N2E2_137 0.64 +0.2 187,168 + Pf6N2E2_137 0.70 -0.2 187,168 + Pf6N2E2_137 0.70 +0.2 187,168 + Pf6N2E2_137 0.70 +0.8 187,171 + Pf6N2E2_137 0.70 -0.7 187,171 + Pf6N2E2_137 0.70 +0.5 187,172 - Pf6N2E2_137 0.70 -0.3 187,293 + Pf6N2E2_137 0.78 -0.3 187,293 + Pf6N2E2_137 0.78 -0.4 187,294 - Pf6N2E2_137 0.78 +0.2 187,359 + Pf6N2E2_137 0.82 -1.9 187,360 - Pf6N2E2_137 0.82 -0.9 187,468 + Pf6N2E2_137 0.89 -1.5 187,585 + +0.9 187,585 + -1.4 187,634 + +0.7 187,634 + +1.1 187,634 + -0.9 187,634 + +0.6 187,634 + +0.1 187,634 + -0.2 187,634 + -0.0 187,634 + +0.2 187,634 + -0.2 187,634 + -0.7 187,634 + +0.5 187,635 - -1.8 187,635 - -0.2 187,635 - +0.4 187,635 - -0.3 187,635 - +0.3 187,635 - +0.3 187,635 - -0.2 187,840 - Pf6N2E2_138 0.19 -1.0 187,840 - Pf6N2E2_138 0.19 -0.7 187,840 - Pf6N2E2_138 0.19 +0.9 188,005 + Pf6N2E2_138 0.37 -0.2 188,006 - Pf6N2E2_138 0.37 -0.8 188,171 - Pf6N2E2_138 0.54 +0.9 188,263 + Pf6N2E2_138 0.64 -1.8 188,326 + Pf6N2E2_138 0.71 -1.9 188,381 - Pf6N2E2_138 0.77 +0.1 188,515 + -0.1 188,540 - +0.8 188,540 - +0.5 188,655 + +0.5 188,656 - +0.0 188,656 - -0.6 188,656 - +1.2 188,656 - +0.1 188,662 + +0.5 188,662 + -0.9 188,699 - +1.4 188,699 - +0.3 188,715 + +0.5 188,715 + +0.9 188,715 + -0.1 188,715 + -0.4 188,716 - +0.2 188,716 - -1.0 188,716 - +1.0 188,723 - +1.5 188,723 - +0.9 188,723 - +0.3 188,747 + -0.7 188,747 + +0.3 188,747 + +2.1 188,748 - -0.4 188,748 - -0.0 188,748 - -0.1 188,748 - -0.7 188,748 - +0.2 188,748 - -0.1 188,748 - +1.5 188,748 - -0.9 188,789 + -0.0 188,789 + +0.8 188,789 + -0.4 188,790 - +0.0 188,833 + +0.9 188,833 + -1.6 188,937 + +0.3 188,937 + +0.8 188,937 + -0.3 188,937 + -0.4 188,937 + -0.0 188,938 - +0.3 188,938 - -1.0 188,938 - +0.1 188,938 - -0.7 188,938 - -0.7 188,938 - -0.3 188,939 + -0.3 188,939 + -0.1 188,939 + +0.5 188,939 + +0.4 188,939 + +0.5 188,939 + -0.0 188,939 + +0.1 188,939 + +0.9 188,939 + +0.5 188,940 - +0.5 188,940 - -0.1 188,940 - -0.3 188,940 - -0.7 188,940 - -0.1 188,940 - -0.4 188,940 - -0.2 188,941 + -0.8 188,942 - +1.2 189,066 + -0.5 189,118 + -0.2 189,119 - -0.1 189,336 + Pf6N2E2_139 0.32 -0.7 189,336 + Pf6N2E2_139 0.32 -0.1 189,336 + Pf6N2E2_139 0.32 -0.0 189,336 + Pf6N2E2_139 0.32 +0.6 189,336 + Pf6N2E2_139 0.32 +0.1 189,336 + Pf6N2E2_139 0.32 -0.1 189,336 + Pf6N2E2_139 0.32 +0.6 189,336 + Pf6N2E2_139 0.32 -0.3 189,337 - Pf6N2E2_139 0.32 +0.1 189,337 - Pf6N2E2_139 0.32 +0.6 189,337 - Pf6N2E2_139 0.32 -0.0 189,337 - Pf6N2E2_139 0.32 +0.9 189,337 - Pf6N2E2_139 0.32 +0.8 189,337 - Pf6N2E2_139 0.32 -1.1 189,337 - Pf6N2E2_139 0.32 +2.0 189,337 - Pf6N2E2_139 0.32 +0.9 189,337 - Pf6N2E2_139 0.32 +0.7 189,337 - Pf6N2E2_139 0.32 +0.4 189,337 - Pf6N2E2_139 0.32 +0.2 189,337 - Pf6N2E2_139 0.32 -0.3 189,402 + Pf6N2E2_139 0.39 +0.0 189,402 + Pf6N2E2_139 0.39 -0.5 189,402 + Pf6N2E2_139 0.39 +0.2 189,403 - Pf6N2E2_139 0.39 +0.9 189,403 - Pf6N2E2_139 0.39 -0.2 189,403 - Pf6N2E2_139 0.39 +1.1
Or see this region's nucleotide sequence