Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02243

Experiment: PYE 0.5x 4C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C survival rep2 28 days
2,390,856	-		CCNA_02241	0.79	+0.2
2,390,925	-				-2.1
2,390,928	+				-2.9
2,390,928	+				+0.4
2,390,930	+				-0.1
2,390,962	+				+0.0
2,390,980	-				+0.1
2,390,980	-				+0.1
2,391,005	+				+1.9
2,391,005	+				+0.1
2,391,013	-				-2.4
2,391,029	-				-0.4
2,391,052	+				-2.4
2,391,061	-				+0.5
2,391,081	+				-0.3
2,391,117	+				+1.1
2,391,120	-				-0.4
2,391,120	-				+0.7
2,391,122	+				-1.3
2,391,125	-				+0.6
2,391,125	-				+1.3
2,391,144	-				+2.4
2,391,164	+				-1.3
2,391,165	-				+0.3
2,391,165	-				+0.5
2,391,165	-				+1.2
2,391,197	-		CCNA_02242	0.16	+0.0
2,391,252	-		CCNA_02242	0.29	-1.2
2,391,264	-		CCNA_02242	0.32	-2.2
2,391,279	-		CCNA_02242	0.35	-1.3
2,391,286	-		CCNA_02242	0.37	+0.1
2,391,358	-		CCNA_02242	0.53	-0.5
2,391,393	-		CCNA_02242	0.61	-0.2
2,391,455	-		CCNA_02242	0.76	-0.7
2,391,462	-		CCNA_02242	0.77	-0.5
2,391,500	-		CCNA_02242	0.86	-1.1
2,391,522	-				-0.4
2,391,522	-				-0.9
2,391,522	-				-1.5
2,391,524	-				-1.0
2,391,532	-				-1.3
2,391,543	-				-0.7
2,391,564	-				-3.8
2,391,564	-				-0.7
2,391,568	+				+2.1
2,391,663	-				-0.2
2,391,698	-				-1.1
2,391,764	-				+0.2
2,391,769	-				-0.6
2,391,817	+				+1.6
2,391,825	-				-1.3
2,391,857	+				+0.6
2,391,867	+				+1.7
2,391,868	+				+2.0
2,391,876	-				+0.7
2,391,902	+				+1.7
2,391,908	+				+2.1
2,391,908	+				+1.4
2,391,908	+				+1.9
2,391,910	-				+1.2
2,391,938	+				+1.6
2,391,976	-		CCNA_02243	0.12	+0.9
2,391,981	+		CCNA_02243	0.13	+1.9
2,391,989	-		CCNA_02243	0.13	+0.9
2,391,989	-		CCNA_02243	0.13	+0.7
2,391,989	-		CCNA_02243	0.13	+1.3
2,391,989	-		CCNA_02243	0.13	+0.4
2,391,994	-		CCNA_02243	0.14	+1.6
2,392,025	+		CCNA_02243	0.16	+1.6
2,392,050	+		CCNA_02243	0.18	+1.9
2,392,050	+		CCNA_02243	0.18	+2.2
2,392,056	-		CCNA_02243	0.18	+1.5
2,392,058	-		CCNA_02243	0.18	+1.6
2,392,060	+		CCNA_02243	0.19	+1.7
2,392,060	+		CCNA_02243	0.19	+1.6
2,392,084	+		CCNA_02243	0.20	+2.0
2,392,084	+		CCNA_02243	0.20	+1.8
2,392,084	+		CCNA_02243	0.20	+1.3
2,392,084	+		CCNA_02243	0.20	+1.8
2,392,084	+		CCNA_02243	0.20	+1.9
2,392,092	-		CCNA_02243	0.21	+0.9
2,392,092	-		CCNA_02243	0.21	+0.8
2,392,100	-		CCNA_02243	0.21	+1.6
2,392,104	+		CCNA_02243	0.22	+1.9
2,392,112	-		CCNA_02243	0.22	+1.0
2,392,206	-		CCNA_02243	0.29	+1.9
2,392,210	+		CCNA_02243	0.30	+1.8
2,392,316	+		CCNA_02243	0.37	+1.4
2,392,324	-		CCNA_02243	0.38	+1.1
2,392,324	-		CCNA_02243	0.38	+1.4
2,392,335	+		CCNA_02243	0.39	+1.7
2,392,335	+		CCNA_02243	0.39	+1.3
2,392,343	-		CCNA_02243	0.39	+1.1
2,392,343	-		CCNA_02243	0.39	+2.2
2,392,359	-		CCNA_02243	0.41	+1.7
2,392,372	+		CCNA_02243	0.42	+1.3
2,392,374	+		CCNA_02243	0.42	+1.7
2,392,374	+		CCNA_02243	0.42	+1.5
2,392,382	-				+2.3
2,392,382	-		CCNA_02243	0.42	+1.3
2,392,459	+		CCNA_02243	0.48	+1.8
2,392,459	+		CCNA_02243	0.48	+1.5
2,392,467	-		CCNA_02243	0.49	+1.0
2,392,514	+		CCNA_02243	0.52	+1.8
2,392,514	+		CCNA_02243	0.52	+1.6
2,392,514	+		CCNA_02243	0.52	+1.9
2,392,522	-		CCNA_02243	0.53	+1.4
2,392,536	+		CCNA_02243	0.54	+1.3
2,392,546	+		CCNA_02243	0.54	+1.9
2,392,546	+		CCNA_02243	0.54	+0.9
2,392,583	+		CCNA_02243	0.57	+1.6
2,392,583	+		CCNA_02243	0.57	+2.0
2,392,584	+		CCNA_02243	0.57	+1.4
2,392,591	-		CCNA_02243	0.58	+1.4
2,392,591	-		CCNA_02243	0.58	+1.7
2,392,612	-		CCNA_02243	0.59	+1.2
2,392,625	-		CCNA_02243	0.60	+1.6
2,392,636	+		CCNA_02243	0.61	+1.7
2,392,637	+		CCNA_02243	0.61	+2.2
2,392,642	+		CCNA_02243	0.61	+1.9
2,392,645	-		CCNA_02243	0.62	+1.2
2,392,698	+		CCNA_02243	0.66	+1.5
2,392,698	+		CCNA_02243	0.66	+1.3
2,392,698	+		CCNA_02243	0.66	+2.1
2,392,706	-		CCNA_02243	0.66	+1.7
2,392,706	-		CCNA_02243	0.66	+1.5
2,392,706	-		CCNA_02243	0.66	+1.6
2,392,706	-		CCNA_02243	0.66	+1.4
2,392,706	-		CCNA_02243	0.66	+1.6
2,392,706	-		CCNA_02243	0.66	+1.5
2,392,713	+		CCNA_02243	0.67	-0.4
2,392,730	-		CCNA_02243	0.68	+0.0
2,392,753	+		CCNA_02243	0.70	+1.3
2,392,753	+		CCNA_02243	0.70	+0.4
2,392,762	+		CCNA_02243	0.70	-0.5
2,392,830	+		CCNA_02243	0.75	+2.9
2,392,830	+		CCNA_02243	0.75	+2.3
2,392,838	-		CCNA_02243	0.76	-1.0
2,392,849	+		CCNA_02243	0.77	+1.2
2,392,849	+		CCNA_02243	0.77	+1.5
2,392,875	+		CCNA_02243	0.79	+1.1
2,392,875	+		CCNA_02243	0.79	+1.1
2,392,875	+		CCNA_02243	0.79	+1.1
2,392,875	+		CCNA_02243	0.79	-0.7
2,392,879	-		CCNA_02243	0.79	+0.9
2,392,883	-		CCNA_02243	0.79	+0.8
2,392,883	-		CCNA_02243	0.79	+1.2
2,392,883	-		CCNA_02243	0.79	+1.4
2,392,883	-		CCNA_02243	0.79	+0.9
2,392,883	-		CCNA_02243	0.79	+0.5
2,392,909	+		CCNA_02243	0.81	+2.5
2,392,917	-		CCNA_02243	0.82	-0.0
2,392,917	-		CCNA_02243	0.82	+1.6
2,392,921	+		CCNA_02243	0.82	+1.2
2,392,927	+		CCNA_02243	0.82	+0.1
2,392,927	+		CCNA_02243	0.82	+1.1
2,392,927	+		CCNA_02243	0.82	+2.2
2,392,927	+		CCNA_02243	0.82	+1.6
2,392,935	-		CCNA_02243	0.83	+1.2
2,392,946	+		CCNA_02243	0.84	+1.9
2,392,959	-		CCNA_02243	0.85	+2.0
2,393,013	+		CCNA_02243	0.89	+1.3
2,393,043	+				+1.7
2,393,043	+				+1.4
2,393,065	+				+1.1
2,393,077	+				+1.7
2,393,077	+				+1.7
2,393,077	+				+1.7
2,393,085	-				+1.8
2,393,085	-				+0.2
2,393,113	-				+1.1
2,393,118	-				+1.3
2,393,122	+				+1.7
2,393,143	-				+1.8
2,393,145	+				+1.7
2,393,148	-				+1.2
2,393,210	+				+0.5
2,393,333	-				+0.7
2,393,470	+		CCNA_02244	0.15	-1.9
2,393,519	+		CCNA_02244	0.19	+0.7
2,393,526	+		CCNA_02244	0.20	-0.9
2,393,527	-		CCNA_02244	0.20	+1.2
2,393,528	-		CCNA_02244	0.20	+1.0
2,393,534	-		CCNA_02244	0.20	+0.1
2,393,534	-		CCNA_02244	0.20	+0.2
2,393,534	-		CCNA_02244	0.20	+1.0
2,393,569	+		CCNA_02244	0.23	-1.7
2,393,576	+		CCNA_02244	0.23	+1.0
2,393,597	+		CCNA_02244	0.25	+1.1
2,393,605	-		CCNA_02244	0.26	+0.8
2,393,616	-		CCNA_02244	0.27	+0.2
2,393,622	+		CCNA_02244	0.27	-1.3
2,393,663	+		CCNA_02244	0.30	+1.6
2,393,668	+		CCNA_02244	0.31	+1.2
2,393,668	+		CCNA_02244	0.31	+1.3
2,393,671	-		CCNA_02244	0.31	+0.0
2,393,671	-		CCNA_02244	0.31	+0.9
2,393,671	-		CCNA_02244	0.31	+0.1
2,393,689	+		CCNA_02244	0.32	-1.8
2,393,697	-		CCNA_02244	0.33	+0.6
2,393,710	+		CCNA_02244	0.34	-2.0
2,393,718	+		CCNA_02244	0.35	-1.8
2,393,718	+		CCNA_02244	0.35	-0.3
2,393,762	-		CCNA_02244	0.38	+1.3
2,393,777	-		CCNA_02244	0.39	+2.1
2,393,845	+		CCNA_02244	0.45	-2.2
2,393,885	-		CCNA_02244	0.48	+1.0
2,393,889	+		CCNA_02244	0.48	-2.4
2,393,897	-		CCNA_02244	0.49	+1.0
2,393,920	-		CCNA_02244	0.50	+0.8
2,393,938	+		CCNA_02244	0.52	-2.1
2,393,946	-		CCNA_02244	0.52	+1.4
2,393,979	+		CCNA_02244	0.55	-3.2
2,393,987	-		CCNA_02244	0.56	+0.4
2,393,994	-		CCNA_02244	0.56	+0.7
2,394,033	+		CCNA_02244	0.59	-2.1
2,394,033	+		CCNA_02244	0.59	-1.9
2,394,056	-		CCNA_02244	0.61	-0.9
2,394,066	-		CCNA_02244	0.62	+2.4
2,394,066	-		CCNA_02244	0.62	+0.3
2,394,073	+		CCNA_02244	0.62	+2.5
2,394,076	-		CCNA_02244	0.63	-0.3
2,394,097	-		CCNA_02244	0.64	+0.5
2,394,132	-		CCNA_02244	0.67	+2.2
2,394,144	+		CCNA_02244	0.68	+0.1