Experiment: Varel_Bryant medium with Chlorpromazine 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0853 and BT0854 are separated by 129 nucleotides BT0854 and BT0855 are separated by 632 nucleotides BT0855 and BT0856 overlap by 4 nucleotides
BT0853: BT0853 - putative methyltransferase (NCBI ptt file), at 1,041,653 to 1,042,408
BT0853
BT0854: BT0854 - hypothetical protein (NCBI ptt file), at 1,042,538 to 1,042,732
BT0854
BT0855: BT0855 - two-component system sensor histidine kinase (NCBI ptt file), at 1,043,365 to 1,044,642
BT0855
BT0856: BT0856 - two-component system response regulator (NCBI ptt file), at 1,044,639 to 1,046,015
BT0856
Position (kb)
1043
1044
1045 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1042.390 kb on + strand at 1042.412 kb on - strand at 1042.423 kb on + strand at 1042.931 kb on + strand at 1042.957 kb on + strand at 1043.366 kb on + strand at 1043.415 kb on + strand at 1043.465 kb on - strand at 1043.513 kb on - strand, within BT0855 at 1043.659 kb on - strand, within BT0855 at 1043.796 kb on + strand, within BT0855 at 1043.889 kb on + strand, within BT0855 at 1044.002 kb on - strand, within BT0855 at 1044.082 kb on - strand, within BT0855 at 1044.100 kb on - strand, within BT0855 at 1044.247 kb on + strand, within BT0855 at 1044.249 kb on + strand, within BT0855 at 1044.359 kb on - strand, within BT0855 at 1044.505 kb on + strand, within BT0855 at 1044.544 kb on - strand at 1044.544 kb on - strand at 1044.610 kb on - strand at 1044.669 kb on + strand at 1044.878 kb on + strand, within BT0856 at 1045.070 kb on - strand, within BT0856 at 1045.071 kb on + strand, within BT0856 at 1045.174 kb on - strand, within BT0856 at 1045.423 kb on - strand, within BT0856 at 1045.494 kb on - strand, within BT0856 at 1045.544 kb on + strand, within BT0856 at 1045.606 kb on - strand, within BT0856
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant medium with Chlorpromazine 0.0125 mM remove 1,042,390 + -0.5 1,042,412 - -3.8 1,042,423 + -0.3 1,042,931 + -0.3 1,042,957 + -1.7 1,043,366 + +2.6 1,043,415 + +2.0 1,043,465 - +0.4 1,043,513 - BT0855 0.12 +0.4 1,043,659 - BT0855 0.23 +0.0 1,043,796 + BT0855 0.34 -0.6 1,043,889 + BT0855 0.41 -0.1 1,044,002 - BT0855 0.50 +0.2 1,044,082 - BT0855 0.56 +0.4 1,044,100 - BT0855 0.58 -0.3 1,044,247 + BT0855 0.69 -0.6 1,044,249 + BT0855 0.69 +1.0 1,044,359 - BT0855 0.78 -1.3 1,044,505 + BT0855 0.89 -0.3 1,044,544 - -1.8 1,044,544 - -0.3 1,044,610 - +0.4 1,044,669 + +2.0 1,044,878 + BT0856 0.17 +1.0 1,045,070 - BT0856 0.31 -2.0 1,045,071 + BT0856 0.31 -1.3 1,045,174 - BT0856 0.39 -1.8 1,045,423 - BT0856 0.57 -2.0 1,045,494 - BT0856 0.62 -1.3 1,045,544 + BT0856 0.66 +0.4 1,045,606 - BT0856 0.70 -0.2
Or see this region's nucleotide sequence